Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 SNORD12C-201ENST00000386307 89 ntBASIC3.42□□□□□ -1.86
RNF43Q68DV7 RNA5SP229-201ENST00000410809 99 ntBASIC3.42□□□□□ -1.86
RNF43Q68DV7 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC3.42□□□□□ -1.86
RNF43Q68DV7 AL353705.1-201ENST00000433468 480 ntBASIC3.42□□□□□ -1.86
RNF43Q68DV7 AC009969.1-201ENST00000438726 172 ntBASIC3.42□□□□□ -1.86
RNF43Q68DV7 AC025750.2-201ENST00000442609 450 ntBASIC3.42□□□□□ -1.86
RNF43Q68DV7 AL021397.1-201ENST00000451806 248 ntBASIC3.42□□□□□ -1.86
RNF43Q68DV7 SNORD65B-201ENST00000459126 73 ntBASIC3.42□□□□□ -1.86
RNF43Q68DV7 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.42□□□□□ -1.86
RNF43Q68DV7 SNORD77.4-201ENST00000516158 81 ntBASIC3.42□□□□□ -1.86
RNF43Q68DV7 RNU1-143P-201ENST00000516296 146 ntBASIC3.42□□□□□ -1.86
RNF43Q68DV7 SNORD19.2-201ENST00000516978 73 ntBASIC3.42□□□□□ -1.86
RNF43Q68DV7 AC097639.2-201ENST00000603159 172 ntBASIC3.42□□□□□ -1.86
RNF43Q68DV7 U1.23-201ENST00000610293 146 ntBASIC3.42□□□□□ -1.86
RNF43Q68DV7 RNU1-68P-201ENST00000615382 146 ntBASIC3.42□□□□□ -1.86
RNF43Q68DV7 uc_338.4-201ENST00000616635 176 ntBASIC3.42□□□□□ -1.86
RNF43Q68DV7 AC009831.4-201ENST00000620744 325 ntBASIC3.42□□□□□ -1.86
RNF43Q68DV7 U1.39-201ENST00000621562 146 ntBASIC3.42□□□□□ -1.86
RNF43Q68DV7 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.42□□□□□ -1.86
RNF43Q68DV7 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
RNF43Q68DV7 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.42□□□□□ -1.86
RNF43Q68DV7 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.42□□□□□ -1.86
RNF43Q68DV7 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
RNF43Q68DV7 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.42□□□□□ -1.86
RNF43Q68DV7 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
RNF43Q68DV7 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.41□□□□□ -1.86
RNF43Q68DV7 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.41□□□□□ -1.86
RNF43Q68DV7 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
RNF43Q68DV7 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.41□□□□□ -1.86
RNF43Q68DV7 MIR422A-201ENST00000362286 90 ntBASIC3.41□□□□□ -1.86
RNF43Q68DV7 Y_RNA.163-201ENST00000363702 113 ntBASIC3.41□□□□□ -1.86
RNF43Q68DV7 SNORA51.5-201ENST00000384126 131 ntBASIC3.41□□□□□ -1.86
RNF43Q68DV7 SNORD14D-201ENST00000384390 87 ntBASIC3.41□□□□□ -1.86
RNF43Q68DV7 Y_RNA.528-201ENST00000384575 108 ntBASIC3.41□□□□□ -1.86
RNF43Q68DV7 Y_RNA.549-201ENST00000384657 102 ntBASIC3.41□□□□□ -1.86
RNF43Q68DV7 RPL21P3-201ENST00000395517 478 ntBASIC3.41□□□□□ -1.86
RNF43Q68DV7 MIR891A-201ENST00000401237 79 ntBASIC3.41□□□□□ -1.86
RNF43Q68DV7 RNA5SP511-201ENST00000410487 115 ntBASIC3.41□□□□□ -1.86
RNF43Q68DV7 AL441985.1-201ENST00000457727 251 ntBASIC3.41□□□□□ -1.86
RNF43Q68DV7 snoU13.28-201ENST00000459235 104 ntBASIC3.41□□□□□ -1.86
RNF43Q68DV7 AC080013.2-201ENST00000460866 323 ntBASIC3.41□□□□□ -1.86
RNF43Q68DV7 AC083906.5-201ENST00000503722 328 ntBASIC3.41□□□□□ -1.86
RNF43Q68DV7 SCARNA20.6-201ENST00000517251 106 ntBASIC3.41□□□□□ -1.86
RNF43Q68DV7 AL929325.1-201ENST00000603096 117 ntBASIC3.41□□□□□ -1.86
RNF43Q68DV7 Six3os1_7.1-201ENST00000621512 201 ntBASIC3.41□□□□□ -1.86
RNF43Q68DV7 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
RNF43Q68DV7 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
RNF43Q68DV7 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
RNF43Q68DV7 AC093010.3-201ENST00000570269 15214 ntBASIC3.4□□□□□ -1.86
RNF43Q68DV7 AC026241.1-201ENST00000517873 2142 ntBASIC3.4□□□□□ -1.86
RNF43Q68DV7 RNU1-70P-201ENST00000362618 164 ntBASIC3.4□□□□□ -1.87
RNF43Q68DV7 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
RNF43Q68DV7 RNU2-49P-201ENST00000410666 184 ntBASIC3.4□□□□□ -1.87
RNF43Q68DV7 RNU7-57P-201ENST00000459540 60 ntBASIC3.4□□□□□ -1.87
RNF43Q68DV7 AC010598.1-201ENST00000510378 103 ntBASIC3.4□□□□□ -1.87
RNF43Q68DV7 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.4□□□□□ -1.87
RNF43Q68DV7 RNA5SP20-201ENST00000515976 84 ntBASIC3.4□□□□□ -1.87
RNF43Q68DV7 RNU6-1098P-201ENST00000516772 96 ntBASIC3.4□□□□□ -1.87
RNF43Q68DV7 AP003327.1-201ENST00000529684 127 ntBASIC3.4□□□□□ -1.87
RNF43Q68DV7 RPL23AP91-201ENST00000569211 455 ntBASIC3.4□□□□□ -1.87
RNF43Q68DV7 AC105245.1-201ENST00000581934 244 ntBASIC3.4□□□□□ -1.87
RNF43Q68DV7 AC104984.5-201ENST00000586878 94 ntBASIC3.4□□□□□ -1.87
RNF43Q68DV7 AC006023.1-201ENST00000603944 259 ntBASIC3.4□□□□□ -1.87
RNF43Q68DV7 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC3.4□□□□□ -1.87
RNF43Q68DV7 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.4□□□□□ -1.87
RNF43Q68DV7 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
RNF43Q68DV7 RNU4-13P-201ENST00000364019 141 ntBASIC3.39□□□□□ -1.87
RNF43Q68DV7 MIR181A2-201ENST00000384863 110 ntBASIC3.39□□□□□ -1.87
RNF43Q68DV7 MIR624-201ENST00000385217 97 ntBASIC3.39□□□□□ -1.87
RNF43Q68DV7 MIR147B-201ENST00000390185 80 ntBASIC3.39□□□□□ -1.87
RNF43Q68DV7 AL031121.1-201ENST00000406553 254 ntBASIC3.39□□□□□ -1.87
RNF43Q68DV7 RNU4-47P-201ENST00000410876 114 ntBASIC3.39□□□□□ -1.87
RNF43Q68DV7 RNA5SP310-201ENST00000459084 116 ntBASIC3.39□□□□□ -1.87
RNF43Q68DV7 RNU1-61P-201ENST00000516107 151 ntBASIC3.39□□□□□ -1.87
RNF43Q68DV7 MIR3609-201ENST00000582661 80 ntBASIC3.39□□□□□ -1.87
RNF43Q68DV7 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
RNF43Q68DV7 5S_rRNA.13-201ENST00000622298 123 ntBASIC3.39□□□□□ -1.87
RNF43Q68DV7 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
RNF43Q68DV7 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
RNF43Q68DV7 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
RNF43Q68DV7 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
RNF43Q68DV7 AC008264.2-201ENST00000610193 3731 ntBASIC3.38□□□□□ -1.87
RNF43Q68DV7 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
RNF43Q68DV7 RNA5SP126-201ENST00000365092 109 ntBASIC3.38□□□□□ -1.87
RNF43Q68DV7 RNU6-1275P-201ENST00000391087 107 ntBASIC3.38□□□□□ -1.87
RNF43Q68DV7 MIR1302-5-201ENST00000408164 150 ntBASIC3.38□□□□□ -1.87
RNF43Q68DV7 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.38□□□□□ -1.87
RNF43Q68DV7 RNA5SP127-201ENST00000411051 133 ntBASIC3.38□□□□□ -1.87
RNF43Q68DV7 CALM2P4-201ENST00000430810 426 ntBASIC3.38□□□□□ -1.87
RNF43Q68DV7 AF228730.3-201ENST00000436691 102 ntBASIC3.38□□□□□ -1.87
RNF43Q68DV7 MTATP6P21-201ENST00000440681 189 ntBASIC3.38□□□□□ -1.87
RNF43Q68DV7 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.38□□□□□ -1.87
RNF43Q68DV7 SNORA40.13-201ENST00000516379 120 ntBASIC3.38□□□□□ -1.87
RNF43Q68DV7 RNU5F-4P-201ENST00000516581 114 ntBASIC3.38□□□□□ -1.87
RNF43Q68DV7 RNU1-104P-201ENST00000517280 175 ntBASIC3.38□□□□□ -1.87
RNF43Q68DV7 AC015720.1-201ENST00000565251 277 ntBASIC3.38□□□□□ -1.87
RNF43Q68DV7 RPL12P50-201ENST00000603116 116 ntBASIC3.38□□□□□ -1.87
RNF43Q68DV7 RPL17P51-201ENST00000605218 238 ntBASIC3.38□□□□□ -1.87
RNF43Q68DV7 AC062037.1-201ENST00000605302 128 ntBASIC3.38□□□□□ -1.87
RNF43Q68DV7 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 210.4 ms