Protein–RNA interactions for Protein: Q12948

FOXC1, Forkhead box protein C1, humanhuman

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC1Q12948 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.76□□□□□ -1.81
FOXC1Q12948 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC3.76□□□□□ -1.81
FOXC1Q12948 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
FOXC1Q12948 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
FOXC1Q12948 AC091564.4-201ENST00000533934 2194 ntBASIC3.76□□□□□ -1.81
FOXC1Q12948 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
FOXC1Q12948 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
FOXC1Q12948 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
FOXC1Q12948 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
FOXC1Q12948 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.76□□□□□ -1.81
FOXC1Q12948 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
FOXC1Q12948 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
FOXC1Q12948 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
FOXC1Q12948 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.75□□□□□ -1.81
FOXC1Q12948 MAPK10-372ENST00000641954 3413 ntBASIC3.75□□□□□ -1.81
FOXC1Q12948 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
FOXC1Q12948 RNU6-1313P-201ENST00000362622 102 ntBASIC3.75□□□□□ -1.81
FOXC1Q12948 SNORA38.1-201ENST00000364172 131 ntBASIC3.75□□□□□ -1.81
FOXC1Q12948 RNU6-438P-201ENST00000365561 103 ntBASIC3.75□□□□□ -1.81
FOXC1Q12948 AL627390.1-201ENST00000396055 340 ntBASIC3.75□□□□□ -1.81
FOXC1Q12948 POLR2J4-204ENST00000418424 324 ntBASIC3.75□□□□□ -1.81
FOXC1Q12948 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.75□□□□□ -1.81
FOXC1Q12948 RNU6-523P-201ENST00000516304 54 ntBASIC3.75□□□□□ -1.81
FOXC1Q12948 SCARNA14-201ENST00000516903 136 ntBASIC3.75□□□□□ -1.81
FOXC1Q12948 RNU6-856P-201ENST00000516959 98 ntBASIC3.75□□□□□ -1.81
FOXC1Q12948 MIR4762-201ENST00000585261 75 ntBASIC3.75□□□□□ -1.81
FOXC1Q12948 MIR6079-201ENST00000635807 62 ntBASIC3.75□□□□□ -1.81
FOXC1Q12948 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
FOXC1Q12948 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.75□□□□□ -1.81
FOXC1Q12948 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
FOXC1Q12948 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
FOXC1Q12948 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
FOXC1Q12948 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
FOXC1Q12948 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC3.74□□□□□ -1.81
FOXC1Q12948 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
FOXC1Q12948 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
FOXC1Q12948 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.74□□□□□ -1.81
FOXC1Q12948 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC3.74□□□□□ -1.81
FOXC1Q12948 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC3.74□□□□□ -1.81
FOXC1Q12948 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.74□□□□□ -1.81
FOXC1Q12948 RNA5SP51-201ENST00000364750 119 ntBASIC3.74□□□□□ -1.81
FOXC1Q12948 RNU6-198P-201ENST00000384258 104 ntBASIC3.74□□□□□ -1.81
FOXC1Q12948 RNU11-5P-201ENST00000391216 129 ntBASIC3.74□□□□□ -1.81
FOXC1Q12948 AP000567.1-201ENST00000406413 156 ntBASIC3.74□□□□□ -1.81
FOXC1Q12948 RNU6-1186P-201ENST00000410429 97 ntBASIC3.74□□□□□ -1.81
FOXC1Q12948 DHX9P1-201ENST00000436565 3076 ntBASIC3.74□□□□□ -1.81
FOXC1Q12948 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
FOXC1Q12948 AC004223.1-201ENST00000479840 271 ntBASIC3.74□□□□□ -1.81
FOXC1Q12948 RPL30P14-201ENST00000482744 348 ntBASIC3.74□□□□□ -1.81
FOXC1Q12948 AC093259.1-201ENST00000509755 300 ntBASIC3.74□□□□□ -1.81
FOXC1Q12948 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.74□□□□□ -1.81
FOXC1Q12948 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
FOXC1Q12948 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
FOXC1Q12948 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
FOXC1Q12948 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
FOXC1Q12948 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
FOXC1Q12948 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.74□□□□□ -1.81
FOXC1Q12948 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
FOXC1Q12948 SNORD115-27-201ENST00000364430 82 ntBASIC3.73□□□□□ -1.81
FOXC1Q12948 MIR802-201ENST00000390235 94 ntBASIC3.73□□□□□ -1.81
FOXC1Q12948 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
FOXC1Q12948 MIR1253-201ENST00000408273 105 ntBASIC3.73□□□□□ -1.81
FOXC1Q12948 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.73□□□□□ -1.81
FOXC1Q12948 Z98742.2-201ENST00000431564 187 ntBASIC3.73□□□□□ -1.81
FOXC1Q12948 RPS15AP28-201ENST00000435088 386 ntBASIC3.73□□□□□ -1.81
FOXC1Q12948 MIR1270-201ENST00000459320 83 ntBASIC3.73□□□□□ -1.81
FOXC1Q12948 AC022695.1-201ENST00000522089 237 ntBASIC3.73□□□□□ -1.81
FOXC1Q12948 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.73□□□□□ -1.81
FOXC1Q12948 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.73□□□□□ -1.81
FOXC1Q12948 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
FOXC1Q12948 AC011266.1-201ENST00000624119 3569 ntBASIC3.73□□□□□ -1.81
FOXC1Q12948 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC3.73□□□□□ -1.81
FOXC1Q12948 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.72□□□□□ -1.81
FOXC1Q12948 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
FOXC1Q12948 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
FOXC1Q12948 RNA5SP399-201ENST00000364003 117 ntBASIC3.72□□□□□ -1.81
FOXC1Q12948 SNORD14E-201ENST00000364009 85 ntBASIC3.72□□□□□ -1.81
FOXC1Q12948 RNU6-524P-201ENST00000384270 107 ntBASIC3.72□□□□□ -1.81
FOXC1Q12948 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
FOXC1Q12948 MIR921-201ENST00000401133 56 ntBASIC3.72□□□□□ -1.81
FOXC1Q12948 RNA5SP239-201ENST00000410218 129 ntBASIC3.72□□□□□ -1.81
FOXC1Q12948 RNA5SP120-201ENST00000410900 112 ntBASIC3.72□□□□□ -1.81
FOXC1Q12948 AC060773.1-201ENST00000421698 310 ntBASIC3.72□□□□□ -1.81
FOXC1Q12948 HMGN2P34-201ENST00000437647 269 ntBASIC3.72□□□□□ -1.81
FOXC1Q12948 RNU7-143P-201ENST00000516781 65 ntBASIC3.72□□□□□ -1.81
FOXC1Q12948 YPEL5P3-201ENST00000547227 352 ntBASIC3.72□□□□□ -1.81
FOXC1Q12948 MIR5187-201ENST00000583479 76 ntBASIC3.72□□□□□ -1.81
FOXC1Q12948 AC096720.1-201ENST00000604441 183 ntBASIC3.72□□□□□ -1.81
FOXC1Q12948 FAS-AS1.1-201ENST00000615327 126 ntBASIC3.72□□□□□ -1.81
FOXC1Q12948 MIR6076-201ENST00000617521 113 ntBASIC3.72□□□□□ -1.81
FOXC1Q12948 AC021613.1-201ENST00000623880 111 ntBASIC3.72□□□□□ -1.81
FOXC1Q12948 MIR1248-201ENST00000629190 106 ntBASIC3.72□□□□□ -1.81
FOXC1Q12948 U6.108-201ENST00000637764 58 ntBASIC3.72□□□□□ -1.81
FOXC1Q12948 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
FOXC1Q12948 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
FOXC1Q12948 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
FOXC1Q12948 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.71□□□□□ -1.81
FOXC1Q12948 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.81
FOXC1Q12948 SNORD115-2-201ENST00000362842 82 ntBASIC3.71□□□□□ -1.82
FOXC1Q12948 U8.5-201ENST00000364528 136 ntBASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 122.7 ms