Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 AC068724.3-201ENST00000625906 87 ntBASIC3.56□□□□□ -1.84
RNF144AP50876 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.56□□□□□ -1.84
RNF144AP50876 AC018630.2-201ENST00000534866 2403 ntBASIC3.55□□□□□ -1.84
RNF144AP50876 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
RNF144AP50876 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
RNF144AP50876 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
RNF144AP50876 RNU6-546P-201ENST00000383991 107 ntBASIC3.55□□□□□ -1.84
RNF144AP50876 AC244505.4-201ENST00000434905 287 ntBASIC3.55□□□□□ -1.84
RNF144AP50876 SSXP5-201ENST00000443473 287 ntBASIC3.55□□□□□ -1.84
RNF144AP50876 RPL39P25-201ENST00000449384 154 ntBASIC3.55□□□□□ -1.84
RNF144AP50876 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC3.55□□□□□ -1.84
RNF144AP50876 PHBP14-201ENST00000512887 367 ntBASIC3.55□□□□□ -1.84
RNF144AP50876 MIR3160-1-201ENST00000577972 85 ntBASIC3.55□□□□□ -1.84
RNF144AP50876 AC007229.1-201ENST00000590455 412 ntBASIC3.55□□□□□ -1.84
RNF144AP50876 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
RNF144AP50876 AC080128.1-201ENST00000474389 1917 ntBASIC3.54□□□□□ -1.84
RNF144AP50876 ZNF720P1-201ENST00000562403 1939 ntBASIC3.54□□□□□ -1.84
RNF144AP50876 MIR548O-201ENST00000408583 114 ntBASIC3.54□□□□□ -1.84
RNF144AP50876 AC123900.1-201ENST00000420390 96 ntBASIC3.54□□□□□ -1.84
RNF144AP50876 AC060773.1-201ENST00000421698 310 ntBASIC3.54□□□□□ -1.84
RNF144AP50876 AC009414.1-201ENST00000427200 443 ntBASIC3.54□□□□□ -1.84
RNF144AP50876 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC3.54□□□□□ -1.84
RNF144AP50876 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.54□□□□□ -1.84
RNF144AP50876 AL359075.3-201ENST00000613288 217 ntBASIC3.54□□□□□ -1.84
RNF144AP50876 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
RNF144AP50876 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
RNF144AP50876 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
RNF144AP50876 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.54□□□□□ -1.84
RNF144AP50876 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
RNF144AP50876 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.53□□□□□ -1.84
RNF144AP50876 RNY1P10-201ENST00000363268 113 ntBASIC3.53□□□□□ -1.84
RNF144AP50876 RN7SL323P-201ENST00000494712 295 ntBASIC3.53□□□□□ -1.84
RNF144AP50876 AC093259.1-201ENST00000509755 300 ntBASIC3.53□□□□□ -1.84
RNF144AP50876 DEFB131E-201ENST00000532329 154 ntBASIC3.53□□□□□ -1.84
RNF144AP50876 MIR4474-201ENST00000579189 78 ntBASIC3.53□□□□□ -1.84
RNF144AP50876 MIR3163-201ENST00000581592 73 ntBASIC3.53□□□□□ -1.84
RNF144AP50876 SNORA51-201ENST00000606420 132 ntBASIC3.53□□□□□ -1.84
RNF144AP50876 AL162726.3-218ENST00000636401 95 ntBASIC3.53□□□□□ -1.84
RNF144AP50876 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
RNF144AP50876 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
RNF144AP50876 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
RNF144AP50876 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
RNF144AP50876 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
RNF144AP50876 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.53□□□□□ -1.84
RNF144AP50876 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.53□□□□□ -1.84
RNF144AP50876 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.52□□□□□ -1.85
RNF144AP50876 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
RNF144AP50876 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
RNF144AP50876 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
RNF144AP50876 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.52□□□□□ -1.85
RNF144AP50876 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC3.52□□□□□ -1.85
RNF144AP50876 RNU4-36P-201ENST00000364294 144 ntBASIC3.52□□□□□ -1.85
RNF144AP50876 RNU1-133P-201ENST00000364867 167 ntBASIC3.52□□□□□ -1.85
RNF144AP50876 RNA5SP97-201ENST00000365006 84 ntBASIC3.52□□□□□ -1.85
RNF144AP50876 RNY1P6-201ENST00000384193 109 ntBASIC3.52□□□□□ -1.85
RNF144AP50876 RNU6-1104P-201ENST00000384723 104 ntBASIC3.52□□□□□ -1.85
RNF144AP50876 MIR30B-201ENST00000384850 88 ntBASIC3.52□□□□□ -1.85
RNF144AP50876 MIR1193-201ENST00000408109 78 ntBASIC3.52□□□□□ -1.85
RNF144AP50876 FTH1P12-201ENST00000432137 551 ntBASIC3.52□□□□□ -1.85
RNF144AP50876 AC026402.1-201ENST00000513642 170 ntBASIC3.52□□□□□ -1.85
RNF144AP50876 SCARNA14-201ENST00000516903 136 ntBASIC3.52□□□□□ -1.85
RNF144AP50876 RNU6-341P-201ENST00000516973 96 ntBASIC3.52□□□□□ -1.85
RNF144AP50876 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.52□□□□□ -1.85
RNF144AP50876 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.52□□□□□ -1.85
RNF144AP50876 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.52□□□□□ -1.85
RNF144AP50876 MIR6079-201ENST00000635807 62 ntBASIC3.52□□□□□ -1.85
RNF144AP50876 AC093010.3-201ENST00000570269 15214 ntBASIC3.52□□□□□ -1.85
RNF144AP50876 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
RNF144AP50876 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
RNF144AP50876 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
RNF144AP50876 SNORA57.1-201ENST00000391227 145 ntBASIC3.51□□□□□ -1.85
RNF144AP50876 RNU6-1077P-201ENST00000410506 102 ntBASIC3.51□□□□□ -1.85
RNF144AP50876 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.51□□□□□ -1.85
RNF144AP50876 AC009969.1-201ENST00000438726 172 ntBASIC3.51□□□□□ -1.85
RNF144AP50876 AC010401.1-201ENST00000463867 348 ntBASIC3.51□□□□□ -1.85
RNF144AP50876 RNU7-123P-201ENST00000515911 60 ntBASIC3.51□□□□□ -1.85
RNF144AP50876 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC3.51□□□□□ -1.85
RNF144AP50876 AL358944.1-201ENST00000528537 144 ntBASIC3.51□□□□□ -1.85
RNF144AP50876 AC008011.1-201ENST00000545989 227 ntBASIC3.51□□□□□ -1.85
RNF144AP50876 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.51□□□□□ -1.85
RNF144AP50876 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.51□□□□□ -1.85
RNF144AP50876 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
RNF144AP50876 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.51□□□□□ -1.85
RNF144AP50876 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.51□□□□□ -1.85
RNF144AP50876 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.5□□□□□ -1.85
RNF144AP50876 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
RNF144AP50876 CEP170P1-201ENST00000502249 4587 ntBASIC3.5□□□□□ -1.85
RNF144AP50876 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
RNF144AP50876 snoU2-30.2-201ENST00000362805 70 ntBASIC3.5□□□□□ -1.85
RNF144AP50876 RNY3P2-201ENST00000362918 102 ntBASIC3.5□□□□□ -1.85
RNF144AP50876 MIR522-201ENST00000385071 87 ntBASIC3.5□□□□□ -1.85
RNF144AP50876 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
RNF144AP50876 RNU6-816P-201ENST00000390914 107 ntBASIC3.5□□□□□ -1.85
RNF144AP50876 RNU6-1268P-201ENST00000391214 107 ntBASIC3.5□□□□□ -1.85
RNF144AP50876 RNU6-1239P-201ENST00000391310 107 ntBASIC3.5□□□□□ -1.85
RNF144AP50876 ATP6V0E1P1-201ENST00000412537 226 ntBASIC3.5□□□□□ -1.85
RNF144AP50876 AL161788.1-201ENST00000441805 169 ntBASIC3.5□□□□□ -1.85
RNF144AP50876 RPS12P18-201ENST00000442381 270 ntBASIC3.5□□□□□ -1.85
RNF144AP50876 RNU6-893P-201ENST00000458841 100 ntBASIC3.5□□□□□ -1.85
RNF144AP50876 RNU1-131P-201ENST00000458943 161 ntBASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms