Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2□□□□□ -2.09
HOXC8P31273 SNORD13-201ENST00000459299 104 ntBASIC2□□□□□ -2.09
HOXC8P31273 SNORA40.9-201ENST00000515895 93 ntBASIC2□□□□□ -2.09
HOXC8P31273 SNORA40.15-201ENST00000516884 107 ntBASIC2□□□□□ -2.09
HOXC8P31273 AC002984.1-201ENST00000591692 448 ntBASIC2□□□□□ -2.09
HOXC8P31273 AL109918.3-201ENST00000603072 338 ntBASIC2□□□□□ -2.09
HOXC8P31273 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2□□□□□ -2.09
HOXC8P31273 RNU1-62P-201ENST00000362599 164 ntBASIC1.99□□□□□ -2.09
HOXC8P31273 Y_RNA.64-201ENST00000362845 102 ntBASIC1.99□□□□□ -2.09
HOXC8P31273 Y_RNA.105-201ENST00000363182 111 ntBASIC1.99□□□□□ -2.09
HOXC8P31273 Y_RNA.140-201ENST00000363474 103 ntBASIC1.99□□□□□ -2.09
HOXC8P31273 Y_RNA.143-201ENST00000363520 106 ntBASIC1.99□□□□□ -2.09
HOXC8P31273 Y_RNA.149-201ENST00000363558 117 ntBASIC1.99□□□□□ -2.09
HOXC8P31273 Y_RNA.176-201ENST00000363815 109 ntBASIC1.99□□□□□ -2.09
HOXC8P31273 RNU6-457P-201ENST00000363999 107 ntBASIC1.99□□□□□ -2.09
HOXC8P31273 SNORD87-201ENST00000364849 89 ntBASIC1.99□□□□□ -2.09
HOXC8P31273 Y_RNA.332-201ENST00000365271 113 ntBASIC1.99□□□□□ -2.09
HOXC8P31273 RNU6-574P-201ENST00000384265 107 ntBASIC1.99□□□□□ -2.09
HOXC8P31273 Y_RNA.574-201ENST00000384766 95 ntBASIC1.99□□□□□ -2.09
HOXC8P31273 RNU6-1109P-201ENST00000391187 107 ntBASIC1.99□□□□□ -2.09
HOXC8P31273 PCNPP5-201ENST00000452246 481 ntBASIC1.99□□□□□ -2.09
HOXC8P31273 RNU6-717P-201ENST00000459076 104 ntBASIC1.99□□□□□ -2.09
HOXC8P31273 AC090255.1-201ENST00000495779 349 ntBASIC1.99□□□□□ -2.09
HOXC8P31273 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.99□□□□□ -2.09
HOXC8P31273 RNU6-408P-201ENST00000515910 100 ntBASIC1.99□□□□□ -2.09
HOXC8P31273 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.99□□□□□ -2.09
HOXC8P31273 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.99□□□□□ -2.09
HOXC8P31273 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.99□□□□□ -2.09
HOXC8P31273 Y_RNA.772-201ENST00000606692 102 ntBASIC1.99□□□□□ -2.09
HOXC8P31273 SNORD11B-201ENST00000607707 90 ntBASIC1.99□□□□□ -2.09
HOXC8P31273 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.99□□□□□ -2.09
HOXC8P31273 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.99□□□□□ -2.09
HOXC8P31273 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.99□□□□□ -2.09
HOXC8P31273 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
HOXC8P31273 Y_RNA.19-201ENST00000362462 99 ntBASIC1.98□□□□□ -2.09
HOXC8P31273 Y_RNA.144-201ENST00000363521 113 ntBASIC1.98□□□□□ -2.09
HOXC8P31273 RNU6-961P-201ENST00000363893 105 ntBASIC1.98□□□□□ -2.09
HOXC8P31273 RNA5SP493-201ENST00000364115 91 ntBASIC1.98□□□□□ -2.09
HOXC8P31273 MRPL35P1-201ENST00000404272 572 ntBASIC1.98□□□□□ -2.09
HOXC8P31273 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.98□□□□□ -2.09
HOXC8P31273 MTCYBP9-201ENST00000431021 303 ntBASIC1.98□□□□□ -2.09
HOXC8P31273 AC007395.1-201ENST00000451333 677 ntBASIC1.98□□□□□ -2.09
HOXC8P31273 MTCO2P24-201ENST00000515611 426 ntBASIC1.98□□□□□ -2.09
HOXC8P31273 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.98□□□□□ -2.09
HOXC8P31273 PRR13P7-201ENST00000605538 430 ntBASIC1.98□□□□□ -2.09
HOXC8P31273 AC010205.1-201ENST00000616668 449 ntBASIC1.98□□□□□ -2.09
HOXC8P31273 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.98□□□□□ -2.09
HOXC8P31273 LINC02555-201ENST00000563933 1951 ntBASIC1.98□□□□□ -2.09
HOXC8P31273 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.97□□□□□ -2.09
HOXC8P31273 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
HOXC8P31273 RNU6-661P-201ENST00000362409 107 ntBASIC1.97□□□□□ -2.09
HOXC8P31273 RNU6-545P-201ENST00000362681 104 ntBASIC1.97□□□□□ -2.09
HOXC8P31273 Y_RNA.183-201ENST00000363882 113 ntBASIC1.97□□□□□ -2.09
HOXC8P31273 RNU6-770P-201ENST00000363929 105 ntBASIC1.97□□□□□ -2.09
HOXC8P31273 Y_RNA.222-201ENST00000364264 102 ntBASIC1.97□□□□□ -2.09
HOXC8P31273 RNU6-937P-201ENST00000384325 106 ntBASIC1.97□□□□□ -2.09
HOXC8P31273 SNORA8-201ENST00000384574 139 ntBASIC1.97□□□□□ -2.09
HOXC8P31273 RNU6-121P-201ENST00000410525 99 ntBASIC1.97□□□□□ -2.09
HOXC8P31273 RNA5SP504-201ENST00000410676 117 ntBASIC1.97□□□□□ -2.09
HOXC8P31273 RNA5SP501-201ENST00000410990 112 ntBASIC1.97□□□□□ -2.09
HOXC8P31273 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
HOXC8P31273 RNU6-625P-201ENST00000459412 107 ntBASIC1.97□□□□□ -2.09
HOXC8P31273 RPL26P26-201ENST00000480251 434 ntBASIC1.97□□□□□ -2.09
HOXC8P31273 ATP5EP1-201ENST00000510257 156 ntBASIC1.97□□□□□ -2.09
HOXC8P31273 Y_RNA.676-201ENST00000516393 96 ntBASIC1.97□□□□□ -2.09
HOXC8P31273 SNORA25.15-201ENST00000516487 89 ntBASIC1.97□□□□□ -2.09
HOXC8P31273 RNU6-344P-201ENST00000516635 111 ntBASIC1.97□□□□□ -2.09
HOXC8P31273 RNU6-107P-201ENST00000516643 102 ntBASIC1.97□□□□□ -2.09
HOXC8P31273 RNU1-40P-201ENST00000516816 164 ntBASIC1.97□□□□□ -2.09
HOXC8P31273 RNU1-97P-201ENST00000516872 164 ntBASIC1.97□□□□□ -2.09
HOXC8P31273 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.97□□□□□ -2.09
HOXC8P31273 AC018448.1-201ENST00000552843 316 ntBASIC1.97□□□□□ -2.09
HOXC8P31273 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.97□□□□□ -2.09
HOXC8P31273 AC136932.1-201ENST00000574771 208 ntBASIC1.97□□□□□ -2.09
HOXC8P31273 AL590240.4-201ENST00000616908 390 ntBASIC1.97□□□□□ -2.09
HOXC8P31273 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.97□□□□□ -2.09
HOXC8P31273 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.97□□□□□ -2.09
HOXC8P31273 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.97□□□□□ -2.09
HOXC8P31273 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.09
HOXC8P31273 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.96□□□□□ -2.1
HOXC8P31273 CENPCP1-201ENST00000533085 2578 ntBASIC1.96□□□□□ -2.1
HOXC8P31273 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
HOXC8P31273 RNU6-1305P-201ENST00000364353 104 ntBASIC1.96□□□□□ -2.1
HOXC8P31273 Y_RNA.276-201ENST00000364732 109 ntBASIC1.96□□□□□ -2.1
HOXC8P31273 SNORD31B-201ENST00000364977 69 ntBASIC1.96□□□□□ -2.1
HOXC8P31273 RNU6-196P-201ENST00000384315 107 ntBASIC1.96□□□□□ -2.1
HOXC8P31273 Y_RNA.498-201ENST00000384460 102 ntBASIC1.96□□□□□ -2.1
HOXC8P31273 RNU6-713P-201ENST00000384761 107 ntBASIC1.96□□□□□ -2.1
HOXC8P31273 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
HOXC8P31273 RNA5SP338-201ENST00000410495 85 ntBASIC1.96□□□□□ -2.1
HOXC8P31273 ELOCP21-201ENST00000412558 336 ntBASIC1.96□□□□□ -2.1
HOXC8P31273 LINC01399-202ENST00000458450 244 ntBASIC1.96□□□□□ -2.1
HOXC8P31273 RNU1-131P-201ENST00000458943 161 ntBASIC1.96□□□□□ -2.1
HOXC8P31273 Y_RNA.713-201ENST00000517013 96 ntBASIC1.96□□□□□ -2.1
HOXC8P31273 AC087441.2-201ENST00000529141 262 ntBASIC1.96□□□□□ -2.1
HOXC8P31273 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.96□□□□□ -2.1
HOXC8P31273 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.96□□□□□ -2.1
HOXC8P31273 AL096840.1-201ENST00000603287 93 ntBASIC1.96□□□□□ -2.1
HOXC8P31273 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC1.96□□□□□ -2.1
HOXC8P31273 MIR376A1-201ENST00000616574 68 ntBASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 268.5 ms