Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
RNF40O75150 AL121772.2-201ENST00000614331 297 ntBASIC4.16□□□□□ -1.74
RNF40O75150 AC087741.2-201ENST00000619415 172 ntBASIC4.16□□□□□ -1.74
RNF40O75150 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
RNF40O75150 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.16□□□□□ -1.74
RNF40O75150 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.15□□□□□ -1.74
RNF40O75150 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
RNF40O75150 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
RNF40O75150 SNORD115-13-201ENST00000363358 82 ntBASIC4.15□□□□□ -1.75
RNF40O75150 SNORD115-16-201ENST00000363887 82 ntBASIC4.15□□□□□ -1.75
RNF40O75150 RNU6-219P-201ENST00000364728 107 ntBASIC4.15□□□□□ -1.75
RNF40O75150 SNORD115-1-201ENST00000364961 82 ntBASIC4.15□□□□□ -1.75
RNF40O75150 RNU6-938P-201ENST00000411285 103 ntBASIC4.15□□□□□ -1.75
RNF40O75150 RNU6-162P-201ENST00000516228 103 ntBASIC4.15□□□□□ -1.75
RNF40O75150 RNU6-795P-201ENST00000516323 103 ntBASIC4.15□□□□□ -1.75
RNF40O75150 RNU7-143P-201ENST00000516781 65 ntBASIC4.15□□□□□ -1.75
RNF40O75150 MIR5684-201ENST00000585074 65 ntBASIC4.15□□□□□ -1.75
RNF40O75150 MIR6868-201ENST00000611215 58 ntBASIC4.15□□□□□ -1.75
RNF40O75150 AC006441.5-201ENST00000612680 209 ntBASIC4.15□□□□□ -1.75
RNF40O75150 AC002076.2-201ENST00000617362 122 ntBASIC4.15□□□□□ -1.75
RNF40O75150 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC4.14□□□□□ -1.75
RNF40O75150 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.14□□□□□ -1.75
RNF40O75150 IDE-202ENST00000371581 4480 ntTSL 2 BASIC4.14□□□□□ -1.75
RNF40O75150 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.14□□□□□ -1.75
RNF40O75150 SNORA60-201ENST00000362396 134 ntBASIC4.14□□□□□ -1.75
RNF40O75150 SNORD115-19-201ENST00000363098 82 ntBASIC4.14□□□□□ -1.75
RNF40O75150 SNORD115-18-201ENST00000363293 82 ntBASIC4.14□□□□□ -1.75
RNF40O75150 SNORD115-17-201ENST00000364612 82 ntBASIC4.14□□□□□ -1.75
RNF40O75150 SNORA14A-201ENST00000364773 135 ntBASIC4.14□□□□□ -1.75
RNF40O75150 Y_RNA.313-201ENST00000365095 103 ntBASIC4.14□□□□□ -1.75
RNF40O75150 Y_RNA.333-201ENST00000365274 102 ntBASIC4.14□□□□□ -1.75
RNF40O75150 RNU6-856P-201ENST00000516959 98 ntBASIC4.14□□□□□ -1.75
RNF40O75150 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC4.14□□□□□ -1.75
RNF40O75150 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC4.14□□□□□ -1.75
RNF40O75150 MIR3618-201ENST00000580330 88 ntBASIC4.14□□□□□ -1.75
RNF40O75150 MIR548Z-201ENST00000584743 97 ntBASIC4.14□□□□□ -1.75
RNF40O75150 AL591424.2-201ENST00000617023 128 ntBASIC4.14□□□□□ -1.75
RNF40O75150 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.14□□□□□ -1.75
RNF40O75150 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
RNF40O75150 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
RNF40O75150 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
RNF40O75150 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
RNF40O75150 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.14□□□□□ -1.75
RNF40O75150 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
RNF40O75150 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
RNF40O75150 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
RNF40O75150 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
RNF40O75150 RNU6-832P-201ENST00000363319 107 ntBASIC4.13□□□□□ -1.75
RNF40O75150 Y_RNA.440-201ENST00000384120 114 ntBASIC4.13□□□□□ -1.75
RNF40O75150 RNU6-402P-201ENST00000410678 103 ntBASIC4.13□□□□□ -1.75
RNF40O75150 BTF3P4-201ENST00000418852 495 ntBASIC4.13□□□□□ -1.75
RNF40O75150 AC099677.2-201ENST00000436385 175 ntBASIC4.13□□□□□ -1.75
RNF40O75150 RNU7-25P-201ENST00000516544 62 ntBASIC4.13□□□□□ -1.75
RNF40O75150 RNU6-1291P-201ENST00000516591 104 ntBASIC4.13□□□□□ -1.75
RNF40O75150 AC091544.4-201ENST00000555268 342 ntBASIC4.13□□□□□ -1.75
RNF40O75150 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.13□□□□□ -1.75
RNF40O75150 GABRG2-229ENST00000641017 3628 ntBASIC4.13□□□□□ -1.75
RNF40O75150 AC018630.2-201ENST00000534866 2403 ntBASIC4.13□□□□□ -1.75
RNF40O75150 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
RNF40O75150 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.12□□□□□ -1.75
RNF40O75150 AC002546.1-201ENST00000588041 2504 ntBASIC4.12□□□□□ -1.75
RNF40O75150 SNORA63.1-201ENST00000362493 131 ntBASIC4.12□□□□□ -1.75
RNF40O75150 Y_RNA.37-201ENST00000362606 108 ntBASIC4.12□□□□□ -1.75
RNF40O75150 SNORA73.2-201ENST00000364946 201 ntBASIC4.12□□□□□ -1.75
RNF40O75150 Y_RNA.360-201ENST00000365512 102 ntBASIC4.12□□□□□ -1.75
RNF40O75150 RNU6-24P-201ENST00000384440 107 ntBASIC4.12□□□□□ -1.75
RNF40O75150 Y_RNA.531-201ENST00000384589 121 ntBASIC4.12□□□□□ -1.75
RNF40O75150 MIR30B-201ENST00000384850 88 ntBASIC4.12□□□□□ -1.75
RNF40O75150 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC4.12□□□□□ -1.75
RNF40O75150 SNRPGP14-201ENST00000435400 219 ntBASIC4.12□□□□□ -1.75
RNF40O75150 AL353813.1-201ENST00000440700 253 ntBASIC4.12□□□□□ -1.75
RNF40O75150 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC4.12□□□□□ -1.75
RNF40O75150 RNU1-131P-201ENST00000458943 161 ntBASIC4.12□□□□□ -1.75
RNF40O75150 RPL29P14-201ENST00000495837 428 ntBASIC4.12□□□□□ -1.75
RNF40O75150 SNORD36C-201ENST00000516733 66 ntBASIC4.12□□□□□ -1.75
RNF40O75150 RNU7-6P-201ENST00000516845 62 ntBASIC4.12□□□□□ -1.75
RNF40O75150 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
RNF40O75150 AC002984.1-201ENST00000591692 448 ntBASIC4.12□□□□□ -1.75
RNF40O75150 SNORA51-201ENST00000606420 132 ntBASIC4.12□□□□□ -1.75
RNF40O75150 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
RNF40O75150 AL359075.3-201ENST00000613288 217 ntBASIC4.12□□□□□ -1.75
RNF40O75150 MIR1248-201ENST00000629190 106 ntBASIC4.12□□□□□ -1.75
RNF40O75150 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
RNF40O75150 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.12□□□□□ -1.75
RNF40O75150 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
RNF40O75150 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC4.12□□□□□ -1.75
RNF40O75150 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.11□□□□□ -1.75
RNF40O75150 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.11□□□□□ -1.75
RNF40O75150 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC4.11□□□□□ -1.75
RNF40O75150 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
RNF40O75150 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC4.11□□□□□ -1.75
RNF40O75150 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.11□□□□□ -1.75
RNF40O75150 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
RNF40O75150 RNU6-661P-201ENST00000362409 107 ntBASIC4.11□□□□□ -1.75
RNF40O75150 SNORD115-35-201ENST00000365122 82 ntBASIC4.11□□□□□ -1.75
RNF40O75150 MIR522-201ENST00000385071 87 ntBASIC4.11□□□□□ -1.75
RNF40O75150 SNORA57.3-201ENST00000411095 141 ntBASIC4.11□□□□□ -1.75
RNF40O75150 FTH1P12-201ENST00000432137 551 ntBASIC4.11□□□□□ -1.75
RNF40O75150 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC4.11□□□□□ -1.75
RNF40O75150 HMGN2P18-201ENST00000450680 270 ntBASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 125 ms