Protein–RNA interactions for Protein: Q9NV64

TMEM39A, Transmembrane protein 39A, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39AQ9NV64 MAPK10-266ENST00000641066 6555 ntBASIC3.42□□□□□ -1.86
TMEM39AQ9NV64 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.42□□□□□ -1.86
TMEM39AQ9NV64 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
TMEM39AQ9NV64 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
TMEM39AQ9NV64 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
TMEM39AQ9NV64 MIR22-201ENST00000362190 85 ntBASIC3.42□□□□□ -1.86
TMEM39AQ9NV64 RNU4-82P-201ENST00000362443 140 ntBASIC3.42□□□□□ -1.86
TMEM39AQ9NV64 RNU6-438P-201ENST00000365561 103 ntBASIC3.42□□□□□ -1.86
TMEM39AQ9NV64 CD24P4-201ENST00000382840 243 ntBASIC3.42□□□□□ -1.86
TMEM39AQ9NV64 RNU6-1328P-201ENST00000410938 106 ntBASIC3.42□□□□□ -1.86
TMEM39AQ9NV64 RNA5SP184-201ENST00000411071 108 ntBASIC3.42□□□□□ -1.86
TMEM39AQ9NV64 RPL36AP21-201ENST00000490372 323 ntBASIC3.42□□□□□ -1.86
TMEM39AQ9NV64 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC3.42□□□□□ -1.86
TMEM39AQ9NV64 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.42□□□□□ -1.86
TMEM39AQ9NV64 RNU6-63P-201ENST00000516690 95 ntBASIC3.42□□□□□ -1.86
TMEM39AQ9NV64 RNU6-965P-201ENST00000516721 96 ntBASIC3.42□□□□□ -1.86
TMEM39AQ9NV64 AC018630.3-201ENST00000542637 96 ntBASIC3.42□□□□□ -1.86
TMEM39AQ9NV64 AC112693.2-201ENST00000556538 232 ntBASIC3.42□□□□□ -1.86
TMEM39AQ9NV64 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
TMEM39AQ9NV64 AC127455.1-201ENST00000565496 145 ntBASIC3.42□□□□□ -1.86
TMEM39AQ9NV64 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.42□□□□□ -1.86
TMEM39AQ9NV64 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
TMEM39AQ9NV64 MIR7515-201ENST00000637837 67 ntBASIC3.42□□□□□ -1.86
TMEM39AQ9NV64 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.42□□□□□ -1.86
TMEM39AQ9NV64 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
TMEM39AQ9NV64 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.41□□□□□ -1.86
TMEM39AQ9NV64 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
TMEM39AQ9NV64 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
TMEM39AQ9NV64 AL135786.1-201ENST00000415892 214 ntBASIC3.41□□□□□ -1.86
TMEM39AQ9NV64 AC105272.1-201ENST00000438604 198 ntBASIC3.41□□□□□ -1.86
TMEM39AQ9NV64 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC3.41□□□□□ -1.86
TMEM39AQ9NV64 AC008267.6-201ENST00000441664 139 ntBASIC3.41□□□□□ -1.86
TMEM39AQ9NV64 AC006539.3-201ENST00000454258 129 ntBASIC3.41□□□□□ -1.86
TMEM39AQ9NV64 AC016925.1-201ENST00000458303 298 ntBASIC3.41□□□□□ -1.86
TMEM39AQ9NV64 RPL23AP54-201ENST00000495129 419 ntBASIC3.41□□□□□ -1.86
TMEM39AQ9NV64 RN7SKP132-201ENST00000516001 208 ntBASIC3.41□□□□□ -1.86
TMEM39AQ9NV64 RNU6-971P-201ENST00000516920 106 ntBASIC3.41□□□□□ -1.86
TMEM39AQ9NV64 RNU7-116P-201ENST00000516940 62 ntBASIC3.41□□□□□ -1.86
TMEM39AQ9NV64 AC025647.1-201ENST00000517879 253 ntBASIC3.41□□□□□ -1.86
TMEM39AQ9NV64 AC012640.5-201ENST00000623897 319 ntBASIC3.41□□□□□ -1.86
TMEM39AQ9NV64 Z82209.1-201ENST00000422141 2135 ntBASIC3.41□□□□□ -1.86
TMEM39AQ9NV64 AC110774.1-201ENST00000623567 2018 ntBASIC3.41□□□□□ -1.86
TMEM39AQ9NV64 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
TMEM39AQ9NV64 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
TMEM39AQ9NV64 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.87
TMEM39AQ9NV64 SNORD67-201ENST00000390833 111 ntBASIC3.4□□□□□ -1.87
TMEM39AQ9NV64 MICF-203ENST00000432679 129 ntBASIC3.4□□□□□ -1.87
TMEM39AQ9NV64 CST9LP2-201ENST00000437612 320 ntBASIC3.4□□□□□ -1.87
TMEM39AQ9NV64 AC090515.1-201ENST00000465295 476 ntBASIC3.4□□□□□ -1.87
TMEM39AQ9NV64 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.4□□□□□ -1.87
TMEM39AQ9NV64 AC093331.1-201ENST00000521474 169 ntBASIC3.4□□□□□ -1.87
TMEM39AQ9NV64 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.4□□□□□ -1.87
TMEM39AQ9NV64 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.4□□□□□ -1.87
TMEM39AQ9NV64 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
TMEM39AQ9NV64 AC009487.4-201ENST00000624969 3585 ntBASIC3.4□□□□□ -1.87
TMEM39AQ9NV64 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
TMEM39AQ9NV64 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
TMEM39AQ9NV64 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
TMEM39AQ9NV64 Y_RNA.420-201ENST00000384043 110 ntBASIC3.39□□□□□ -1.87
TMEM39AQ9NV64 RNY3P5-201ENST00000384127 102 ntBASIC3.39□□□□□ -1.87
TMEM39AQ9NV64 RNU6-1235P-201ENST00000384559 107 ntBASIC3.39□□□□□ -1.87
TMEM39AQ9NV64 Y_RNA.521-201ENST00000384560 114 ntBASIC3.39□□□□□ -1.87
TMEM39AQ9NV64 MIR181A2-201ENST00000384863 110 ntBASIC3.39□□□□□ -1.87
TMEM39AQ9NV64 U6atac.2-201ENST00000408644 118 ntBASIC3.39□□□□□ -1.87
TMEM39AQ9NV64 MIR1261-201ENST00000408659 82 ntBASIC3.39□□□□□ -1.87
TMEM39AQ9NV64 HMGN2P18-201ENST00000450680 270 ntBASIC3.39□□□□□ -1.87
TMEM39AQ9NV64 RNU6-437P-201ENST00000459408 95 ntBASIC3.39□□□□□ -1.87
TMEM39AQ9NV64 RNU6-498P-201ENST00000459468 107 ntBASIC3.39□□□□□ -1.87
TMEM39AQ9NV64 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
TMEM39AQ9NV64 SCARNA3-201ENST00000517097 143 ntBASIC3.39□□□□□ -1.87
TMEM39AQ9NV64 MIR3199-1-201ENST00000582434 88 ntBASIC3.39□□□□□ -1.87
TMEM39AQ9NV64 5S_rRNA.13-201ENST00000622298 123 ntBASIC3.39□□□□□ -1.87
TMEM39AQ9NV64 MIR1248-201ENST00000629190 106 ntBASIC3.39□□□□□ -1.87
TMEM39AQ9NV64 SNORA50A-202ENST00000629536 136 ntBASIC3.39□□□□□ -1.87
TMEM39AQ9NV64 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.39□□□□□ -1.87
TMEM39AQ9NV64 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
TMEM39AQ9NV64 ZNF702P-202ENST00000434269 1966 ntBASIC3.39□□□□□ -1.87
TMEM39AQ9NV64 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
TMEM39AQ9NV64 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
TMEM39AQ9NV64 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
TMEM39AQ9NV64 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
TMEM39AQ9NV64 Y_RNA.622-201ENST00000411091 108 ntBASIC3.38□□□□□ -1.87
TMEM39AQ9NV64 AC008134.1-201ENST00000420943 193 ntBASIC3.38□□□□□ -1.87
TMEM39AQ9NV64 AC108938.1-201ENST00000451204 136 ntBASIC3.38□□□□□ -1.87
TMEM39AQ9NV64 RNU6-1211P-201ENST00000459179 105 ntBASIC3.38□□□□□ -1.87
TMEM39AQ9NV64 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.38□□□□□ -1.87
TMEM39AQ9NV64 SCGB1D5P-201ENST00000515134 247 ntBASIC3.38□□□□□ -1.87
TMEM39AQ9NV64 MIR4738-201ENST00000579134 87 ntBASIC3.38□□□□□ -1.87
TMEM39AQ9NV64 AC006435.5-201ENST00000624486 112 ntBASIC3.38□□□□□ -1.87
TMEM39AQ9NV64 MIR7157-201ENST00000635801 60 ntBASIC3.38□□□□□ -1.87
TMEM39AQ9NV64 MIR6844-201ENST00000637122 62 ntBASIC3.38□□□□□ -1.87
TMEM39AQ9NV64 PWAR6-201ENST00000552334 4618 ntBASIC3.38□□□□□ -1.87
TMEM39AQ9NV64 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
TMEM39AQ9NV64 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
TMEM39AQ9NV64 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
TMEM39AQ9NV64 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.37□□□□□ -1.87
TMEM39AQ9NV64 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
TMEM39AQ9NV64 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.37□□□□□ -1.87
TMEM39AQ9NV64 RNU4-13P-201ENST00000364019 141 ntBASIC3.37□□□□□ -1.87
TMEM39AQ9NV64 Y_RNA.542-201ENST00000384641 111 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 130.5 ms