Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 RNA5SP20-201ENST00000515976 84 ntBASIC2.76□□□□□ -1.97
SEC61A2Q9H9S3 RNU4-57P-201ENST00000515980 135 ntBASIC2.76□□□□□ -1.97
SEC61A2Q9H9S3 AP001328.1-201ENST00000528550 176 ntBASIC2.76□□□□□ -1.97
SEC61A2Q9H9S3 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.76□□□□□ -1.97
SEC61A2Q9H9S3 AC127455.1-201ENST00000565496 145 ntBASIC2.76□□□□□ -1.97
SEC61A2Q9H9S3 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC2.76□□□□□ -1.97
SEC61A2Q9H9S3 MIR5004-201ENST00000579078 107 ntBASIC2.76□□□□□ -1.97
SEC61A2Q9H9S3 UBL5P2-201ENST00000583788 219 ntBASIC2.76□□□□□ -1.97
SEC61A2Q9H9S3 AP003357.1-201ENST00000604497 148 ntBASIC2.76□□□□□ -1.97
SEC61A2Q9H9S3 MIR8057-201ENST00000620957 69 ntBASIC2.76□□□□□ -1.97
SEC61A2Q9H9S3 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.76□□□□□ -1.97
SEC61A2Q9H9S3 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
SEC61A2Q9H9S3 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
SEC61A2Q9H9S3 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.76□□□□□ -1.97
SEC61A2Q9H9S3 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC2.75□□□□□ -1.97
SEC61A2Q9H9S3 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
SEC61A2Q9H9S3 RNU6-1082P-201ENST00000364574 107 ntBASIC2.75□□□□□ -1.97
SEC61A2Q9H9S3 RNU6-234P-201ENST00000365229 104 ntBASIC2.75□□□□□ -1.97
SEC61A2Q9H9S3 Y_RNA.393-201ENST00000383936 102 ntBASIC2.75□□□□□ -1.97
SEC61A2Q9H9S3 RNU6-418P-201ENST00000384035 107 ntBASIC2.75□□□□□ -1.97
SEC61A2Q9H9S3 RNU6-975P-201ENST00000384296 105 ntBASIC2.75□□□□□ -1.97
SEC61A2Q9H9S3 MIR181A2-201ENST00000384863 110 ntBASIC2.75□□□□□ -1.97
SEC61A2Q9H9S3 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
SEC61A2Q9H9S3 MIR887-201ENST00000401258 79 ntBASIC2.75□□□□□ -1.97
SEC61A2Q9H9S3 AL031121.1-201ENST00000406553 254 ntBASIC2.75□□□□□ -1.97
SEC61A2Q9H9S3 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.75□□□□□ -1.97
SEC61A2Q9H9S3 RPL23AP83-201ENST00000434984 473 ntBASIC2.75□□□□□ -1.97
SEC61A2Q9H9S3 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.75□□□□□ -1.97
SEC61A2Q9H9S3 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC2.75□□□□□ -1.97
SEC61A2Q9H9S3 SNRPGP8-201ENST00000454064 226 ntBASIC2.75□□□□□ -1.97
SEC61A2Q9H9S3 AC010598.1-201ENST00000510378 103 ntBASIC2.75□□□□□ -1.97
SEC61A2Q9H9S3 SNORA74D-201ENST00000516404 141 ntBASIC2.75□□□□□ -1.97
SEC61A2Q9H9S3 RNU6-965P-201ENST00000516721 96 ntBASIC2.75□□□□□ -1.97
SEC61A2Q9H9S3 AC109329.2-201ENST00000519658 482 ntBASIC2.75□□□□□ -1.97
SEC61A2Q9H9S3 AC005972.2-201ENST00000604690 348 ntBASIC2.75□□□□□ -1.97
SEC61A2Q9H9S3 AC013412.1-201ENST00000610687 192 ntBASIC2.75□□□□□ -1.97
SEC61A2Q9H9S3 UCA1.1-201ENST00000620952 75 ntBASIC2.75□□□□□ -1.97
SEC61A2Q9H9S3 AC002064.3-201ENST00000623448 346 ntBASIC2.75□□□□□ -1.97
SEC61A2Q9H9S3 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
SEC61A2Q9H9S3 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.75□□□□□ -1.97
SEC61A2Q9H9S3 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
SEC61A2Q9H9S3 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.75□□□□□ -1.97
SEC61A2Q9H9S3 MAPK10-322ENST00000641485 4530 ntBASIC2.74□□□□□ -1.97
SEC61A2Q9H9S3 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
SEC61A2Q9H9S3 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
SEC61A2Q9H9S3 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.74□□□□□ -1.97
SEC61A2Q9H9S3 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
SEC61A2Q9H9S3 RNU6-271P-201ENST00000363858 105 ntBASIC2.74□□□□□ -1.97
SEC61A2Q9H9S3 RNU4-41P-201ENST00000364426 143 ntBASIC2.74□□□□□ -1.97
SEC61A2Q9H9S3 MIR591-201ENST00000385290 95 ntBASIC2.74□□□□□ -1.97
SEC61A2Q9H9S3 RNA5SP511-201ENST00000410487 115 ntBASIC2.74□□□□□ -1.97
SEC61A2Q9H9S3 RNU4-47P-201ENST00000410876 114 ntBASIC2.74□□□□□ -1.97
SEC61A2Q9H9S3 AL135786.1-201ENST00000415892 214 ntBASIC2.74□□□□□ -1.97
SEC61A2Q9H9S3 UQCRHP3-201ENST00000451503 251 ntBASIC2.74□□□□□ -1.97
SEC61A2Q9H9S3 RNU7-107P-201ENST00000459121 61 ntBASIC2.74□□□□□ -1.97
SEC61A2Q9H9S3 RNU6-437P-201ENST00000459408 95 ntBASIC2.74□□□□□ -1.97
SEC61A2Q9H9S3 RNU6-221P-201ENST00000459541 99 ntBASIC2.74□□□□□ -1.97
SEC61A2Q9H9S3 RNU6-919P-201ENST00000516731 104 ntBASIC2.74□□□□□ -1.97
SEC61A2Q9H9S3 RNU6-711P-201ENST00000517255 106 ntBASIC2.74□□□□□ -1.97
SEC61A2Q9H9S3 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.74□□□□□ -1.97
SEC61A2Q9H9S3 MIR3646-201ENST00000578301 84 ntBASIC2.74□□□□□ -1.97
SEC61A2Q9H9S3 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.74□□□□□ -1.97
SEC61A2Q9H9S3 AC004832.5-201ENST00000608677 401 ntBASIC2.74□□□□□ -1.97
SEC61A2Q9H9S3 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.74□□□□□ -1.97
SEC61A2Q9H9S3 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
SEC61A2Q9H9S3 FAM35CP-201ENST00000554755 2470 ntBASIC2.74□□□□□ -1.97
SEC61A2Q9H9S3 GABRG2-229ENST00000641017 3628 ntBASIC2.73□□□□□ -1.97
SEC61A2Q9H9S3 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
SEC61A2Q9H9S3 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.73□□□□□ -1.97
SEC61A2Q9H9S3 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.73□□□□□ -1.97
SEC61A2Q9H9S3 SNORD114-7-201ENST00000362520 77 ntBASIC2.73□□□□□ -1.97
SEC61A2Q9H9S3 Y_RNA.294-201ENST00000364916 102 ntBASIC2.73□□□□□ -1.97
SEC61A2Q9H9S3 RNU6-915P-201ENST00000364943 103 ntBASIC2.73□□□□□ -1.97
SEC61A2Q9H9S3 RNU6-1323P-201ENST00000384025 107 ntBASIC2.73□□□□□ -1.97
SEC61A2Q9H9S3 SNORA46-201ENST00000384762 135 ntBASIC2.73□□□□□ -1.97
SEC61A2Q9H9S3 MIR128-1-201ENST00000384921 82 ntBASIC2.73□□□□□ -1.97
SEC61A2Q9H9S3 SNORD67-201ENST00000390833 111 ntBASIC2.73□□□□□ -1.97
SEC61A2Q9H9S3 RNA5SP274-201ENST00000410484 108 ntBASIC2.73□□□□□ -1.97
SEC61A2Q9H9S3 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
SEC61A2Q9H9S3 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.73□□□□□ -1.97
SEC61A2Q9H9S3 AC083906.5-201ENST00000503722 328 ntBASIC2.73□□□□□ -1.97
SEC61A2Q9H9S3 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.73□□□□□ -1.97
SEC61A2Q9H9S3 AL049861.1-201ENST00000603130 150 ntBASIC2.73□□□□□ -1.97
SEC61A2Q9H9S3 AC120024.3-201ENST00000603167 156 ntBASIC2.73□□□□□ -1.97
SEC61A2Q9H9S3 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.73□□□□□ -1.97
SEC61A2Q9H9S3 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
SEC61A2Q9H9S3 AC091564.4-201ENST00000533934 2194 ntBASIC2.73□□□□□ -1.97
SEC61A2Q9H9S3 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
SEC61A2Q9H9S3 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.72□□□□□ -1.97
SEC61A2Q9H9S3 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
SEC61A2Q9H9S3 RNU1-72P-201ENST00000362976 153 ntBASIC2.72□□□□□ -1.97
SEC61A2Q9H9S3 RNU6-486P-201ENST00000363116 107 ntBASIC2.72□□□□□ -1.97
SEC61A2Q9H9S3 RNU4-13P-201ENST00000364019 141 ntBASIC2.72□□□□□ -1.97
SEC61A2Q9H9S3 Y_RNA.251-201ENST00000364551 99 ntBASIC2.72□□□□□ -1.97
SEC61A2Q9H9S3 SNORA7.4-201ENST00000384249 137 ntBASIC2.72□□□□□ -1.97
SEC61A2Q9H9S3 SNORA54-201ENST00000384281 123 ntBASIC2.72□□□□□ -1.97
SEC61A2Q9H9S3 MIR218-1-201ENST00000384999 110 ntBASIC2.72□□□□□ -1.97
SEC61A2Q9H9S3 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
SEC61A2Q9H9S3 SNORA48.2-201ENST00000390926 124 ntBASIC2.72□□□□□ -1.97
SEC61A2Q9H9S3 SNORA75.5-201ENST00000391291 81 ntBASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 175.4 ms