Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 RNA5SP477-201ENST00000362639 119 ntBASIC1.12□□□□□ -2.23
KRTAP4-4Q9BYR3 RNA5SP346-201ENST00000363541 121 ntBASIC1.12□□□□□ -2.23
KRTAP4-4Q9BYR3 RNA5SP242-201ENST00000364171 118 ntBASIC1.12□□□□□ -2.23
KRTAP4-4Q9BYR3 SNORD115-44-201ENST00000365391 82 ntBASIC1.12□□□□□ -2.23
KRTAP4-4Q9BYR3 RNU1-46P-201ENST00000384425 164 ntBASIC1.12□□□□□ -2.23
KRTAP4-4Q9BYR3 RNU6-140P-201ENST00000384566 108 ntBASIC1.12□□□□□ -2.23
KRTAP4-4Q9BYR3 MIR199B-201ENST00000384849 110 ntBASIC1.12□□□□□ -2.23
KRTAP4-4Q9BYR3 MIR643-201ENST00000385267 97 ntBASIC1.12□□□□□ -2.23
KRTAP4-4Q9BYR3 U8.13-201ENST00000390842 128 ntBASIC1.12□□□□□ -2.23
KRTAP4-4Q9BYR3 HDGFP1-201ENST00000405943 252 ntBASIC1.12□□□□□ -2.23
KRTAP4-4Q9BYR3 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.12□□□□□ -2.23
KRTAP4-4Q9BYR3 RNU6-1267P-201ENST00000410747 107 ntBASIC1.12□□□□□ -2.23
KRTAP4-4Q9BYR3 OR2AT2P-201ENST00000413438 905 ntBASIC1.12□□□□□ -2.23
KRTAP4-4Q9BYR3 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC1.12□□□□□ -2.23
KRTAP4-4Q9BYR3 AL590383.1-201ENST00000428602 75 ntBASIC1.12□□□□□ -2.23
KRTAP4-4Q9BYR3 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC1.12□□□□□ -2.23
KRTAP4-4Q9BYR3 PNKDP1-201ENST00000435914 430 ntBASIC1.12□□□□□ -2.23
KRTAP4-4Q9BYR3 Y_RNA.633-201ENST00000459107 95 ntBASIC1.12□□□□□ -2.23
KRTAP4-4Q9BYR3 ACA64.1-201ENST00000459171 127 ntBASIC1.12□□□□□ -2.23
KRTAP4-4Q9BYR3 RN7SL254P-201ENST00000460609 284 ntBASIC1.12□□□□□ -2.23
KRTAP4-4Q9BYR3 AC068228.1-201ENST00000461723 211 ntBASIC1.12□□□□□ -2.23
KRTAP4-4Q9BYR3 RN7SL93P-201ENST00000463035 293 ntBASIC1.12□□□□□ -2.23
KRTAP4-4Q9BYR3 RN7SL362P-201ENST00000494228 267 ntBASIC1.12□□□□□ -2.23
KRTAP4-4Q9BYR3 AC114324.2-202ENST00000503812 134 ntBASIC1.12□□□□□ -2.23
KRTAP4-4Q9BYR3 AC008945.1-201ENST00000505144 499 ntBASIC1.12□□□□□ -2.23
KRTAP4-4Q9BYR3 SNORD46.2-201ENST00000516021 102 ntBASIC1.12□□□□□ -2.23
KRTAP4-4Q9BYR3 RNU6-518P-201ENST00000516056 96 ntBASIC1.12□□□□□ -2.23
KRTAP4-4Q9BYR3 Y_RNA.667-201ENST00000516212 107 ntBASIC1.12□□□□□ -2.23
KRTAP4-4Q9BYR3 SNORD63.2-201ENST00000516303 64 ntBASIC1.12□□□□□ -2.23
KRTAP4-4Q9BYR3 RNA5SP271-201ENST00000516700 88 ntBASIC1.12□□□□□ -2.23
KRTAP4-4Q9BYR3 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC1.12□□□□□ -2.23
KRTAP4-4Q9BYR3 AC079598.5-201ENST00000547460 117 ntBASIC1.12□□□□□ -2.23
KRTAP4-4Q9BYR3 TXNP4-201ENST00000575018 310 ntBASIC1.12□□□□□ -2.23
KRTAP4-4Q9BYR3 MIR4489-201ENST00000578869 62 ntBASIC1.12□□□□□ -2.23
KRTAP4-4Q9BYR3 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.12□□□□□ -2.23
KRTAP4-4Q9BYR3 RN7SL787P-201ENST00000613000 284 ntBASIC1.12□□□□□ -2.23
KRTAP4-4Q9BYR3 MIR7111-201ENST00000619751 72 ntBASIC1.12□□□□□ -2.23
KRTAP4-4Q9BYR3 AP001052.1-201ENST00000626421 99 ntBASIC1.12□□□□□ -2.23
KRTAP4-4Q9BYR3 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC1.12□□□□□ -2.23
KRTAP4-4Q9BYR3 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC1.12□□□□□ -2.23
KRTAP4-4Q9BYR3 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC1.12□□□□□ -2.23
KRTAP4-4Q9BYR3 AC000095.2-202ENST00000637415 154 ntBASIC1.12□□□□□ -2.23
KRTAP4-4Q9BYR3 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC1.12□□□□□ -2.23
KRTAP4-4Q9BYR3 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC1.12□□□□□ -2.23
KRTAP4-4Q9BYR3 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
KRTAP4-4Q9BYR3 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC1.12□□□□□ -2.23
KRTAP4-4Q9BYR3 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
KRTAP4-4Q9BYR3 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
KRTAP4-4Q9BYR3 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
KRTAP4-4Q9BYR3 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC1.12□□□□□ -2.23
KRTAP4-4Q9BYR3 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC1.12□□□□□ -2.23
KRTAP4-4Q9BYR3 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC1.12□□□□□ -2.23
KRTAP4-4Q9BYR3 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
KRTAP4-4Q9BYR3 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC1.12□□□□□ -2.23
KRTAP4-4Q9BYR3 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC1.12□□□□□ -2.23
KRTAP4-4Q9BYR3 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC1.12□□□□□ -2.23
KRTAP4-4Q9BYR3 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC1.12□□□□□ -2.23
KRTAP4-4Q9BYR3 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
KRTAP4-4Q9BYR3 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC1.12□□□□□ -2.23
KRTAP4-4Q9BYR3 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC1.12□□□□□ -2.23
KRTAP4-4Q9BYR3 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
KRTAP4-4Q9BYR3 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC1.12□□□□□ -2.23
KRTAP4-4Q9BYR3 AC004817.4-201ENST00000602396 3625 ntBASIC1.11□□□□□ -2.23
KRTAP4-4Q9BYR3 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC1.11□□□□□ -2.23
KRTAP4-4Q9BYR3 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC1.11□□□□□ -2.23
KRTAP4-4Q9BYR3 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC1.11□□□□□ -2.23
KRTAP4-4Q9BYR3 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
KRTAP4-4Q9BYR3 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC1.11□□□□□ -2.23
KRTAP4-4Q9BYR3 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC1.11□□□□□ -2.23
KRTAP4-4Q9BYR3 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
KRTAP4-4Q9BYR3 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
KRTAP4-4Q9BYR3 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
KRTAP4-4Q9BYR3 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
KRTAP4-4Q9BYR3 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC1.11□□□□□ -2.23
KRTAP4-4Q9BYR3 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
KRTAP4-4Q9BYR3 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC1.11□□□□□ -2.23
KRTAP4-4Q9BYR3 ZNF106-201ENST00000263805 10460 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
KRTAP4-4Q9BYR3 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
KRTAP4-4Q9BYR3 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
KRTAP4-4Q9BYR3 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC1.11□□□□□ -2.23
KRTAP4-4Q9BYR3 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC1.11□□□□□ -2.23
KRTAP4-4Q9BYR3 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
KRTAP4-4Q9BYR3 USP33-201ENST00000357428 4155 ntTSL 5 BASIC1.11□□□□□ -2.23
KRTAP4-4Q9BYR3 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
KRTAP4-4Q9BYR3 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
KRTAP4-4Q9BYR3 AP003122.5-201ENST00000527668 3766 ntBASIC1.11□□□□□ -2.23
KRTAP4-4Q9BYR3 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
KRTAP4-4Q9BYR3 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC1.11□□□□□ -2.23
KRTAP4-4Q9BYR3 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
KRTAP4-4Q9BYR3 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
KRTAP4-4Q9BYR3 RNU1-108P-201ENST00000362556 161 ntBASIC1.11□□□□□ -2.23
KRTAP4-4Q9BYR3 RNU4-35P-201ENST00000362588 141 ntBASIC1.11□□□□□ -2.23
KRTAP4-4Q9BYR3 snoU2-30.2-201ENST00000362805 70 ntBASIC1.11□□□□□ -2.23
KRTAP4-4Q9BYR3 Y_RNA.59-201ENST00000362828 102 ntBASIC1.11□□□□□ -2.23
KRTAP4-4Q9BYR3 RNU6-627P-201ENST00000364032 102 ntBASIC1.11□□□□□ -2.23
KRTAP4-4Q9BYR3 RNA5SP479-201ENST00000364858 117 ntBASIC1.11□□□□□ -2.23
KRTAP4-4Q9BYR3 SNORD28-201ENST00000384706 75 ntBASIC1.11□□□□□ -2.23
KRTAP4-4Q9BYR3 SNORD28B-201ENST00000390993 75 ntBASIC1.11□□□□□ -2.23
KRTAP4-4Q9BYR3 MIR1197-201ENST00000408818 88 ntBASIC1.11□□□□□ -2.23
KRTAP4-4Q9BYR3 RN7SKP202-201ENST00000410439 330 ntBASIC1.11□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 131.5 ms