Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 AL137067.1-201ENST00000615933 120 ntBASIC3.11□□□□□ -1.91
ATG4DQ86TL0 AL356274.2-201ENST00000624379 3752 ntBASIC3.1□□□□□ -1.91
ATG4DQ86TL0 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
ATG4DQ86TL0 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
ATG4DQ86TL0 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.1□□□□□ -1.91
ATG4DQ86TL0 AL589743.1-201ENST00000551932 2712 ntBASIC3.1□□□□□ -1.91
ATG4DQ86TL0 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.1□□□□□ -1.91
ATG4DQ86TL0 Y_RNA.49-201ENST00000362714 112 ntBASIC3.1□□□□□ -1.91
ATG4DQ86TL0 SNORD32B-201ENST00000364460 84 ntBASIC3.1□□□□□ -1.91
ATG4DQ86TL0 AC109327.2-201ENST00000448339 378 ntBASIC3.1□□□□□ -1.91
ATG4DQ86TL0 RNU7-14P-201ENST00000459331 62 ntBASIC3.1□□□□□ -1.91
ATG4DQ86TL0 RNU6-221P-201ENST00000459541 99 ntBASIC3.1□□□□□ -1.91
ATG4DQ86TL0 snoMBII-202.2-201ENST00000517263 86 ntBASIC3.1□□□□□ -1.91
ATG4DQ86TL0 MIR2681-201ENST00000581814 105 ntBASIC3.1□□□□□ -1.91
ATG4DQ86TL0 MIR4753-201ENST00000585119 83 ntBASIC3.1□□□□□ -1.91
ATG4DQ86TL0 AL110115.1-201ENST00000614396 364 ntBASIC3.1□□□□□ -1.91
ATG4DQ86TL0 AC010889.1-201ENST00000566193 2666 ntBASIC3.1□□□□□ -1.91
ATG4DQ86TL0 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
ATG4DQ86TL0 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
ATG4DQ86TL0 AC017071.1-201ENST00000564407 2204 ntBASIC3.09□□□□□ -1.91
ATG4DQ86TL0 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.09□□□□□ -1.91
ATG4DQ86TL0 MIR562-201ENST00000384894 95 ntBASIC3.09□□□□□ -1.91
ATG4DQ86TL0 MIR450A2-201ENST00000385022 100 ntBASIC3.09□□□□□ -1.91
ATG4DQ86TL0 MIR34B-201ENST00000385076 84 ntBASIC3.09□□□□□ -1.91
ATG4DQ86TL0 MIR181B1-201ENST00000385240 110 ntBASIC3.09□□□□□ -1.91
ATG4DQ86TL0 SNORD17-201ENST00000390930 237 ntBASIC3.09□□□□□ -1.91
ATG4DQ86TL0 HSPE1P26-201ENST00000405341 275 ntBASIC3.09□□□□□ -1.91
ATG4DQ86TL0 AC245291.1-201ENST00000419501 328 ntBASIC3.09□□□□□ -1.91
ATG4DQ86TL0 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC3.09□□□□□ -1.91
ATG4DQ86TL0 RPS4XP11-201ENST00000446897 772 ntBASIC3.09□□□□□ -1.91
ATG4DQ86TL0 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.09□□□□□ -1.91
ATG4DQ86TL0 AC010401.1-201ENST00000463867 348 ntBASIC3.09□□□□□ -1.91
ATG4DQ86TL0 OR9P1P-201ENST00000496431 281 ntBASIC3.09□□□□□ -1.91
ATG4DQ86TL0 IGHVIII-67-2-201ENST00000519849 88 ntBASIC3.09□□□□□ -1.91
ATG4DQ86TL0 MIR3690-201ENST00000580266 75 ntBASIC3.09□□□□□ -1.91
ATG4DQ86TL0 MIR3609-201ENST00000582661 80 ntBASIC3.09□□□□□ -1.91
ATG4DQ86TL0 RPL17P51-201ENST00000605218 238 ntBASIC3.09□□□□□ -1.91
ATG4DQ86TL0 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.09□□□□□ -1.91
ATG4DQ86TL0 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC3.09□□□□□ -1.91
ATG4DQ86TL0 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.92
ATG4DQ86TL0 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
ATG4DQ86TL0 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
ATG4DQ86TL0 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
ATG4DQ86TL0 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.08□□□□□ -1.92
ATG4DQ86TL0 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
ATG4DQ86TL0 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
ATG4DQ86TL0 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.08□□□□□ -1.92
ATG4DQ86TL0 RNU6-820P-201ENST00000384273 107 ntBASIC3.08□□□□□ -1.92
ATG4DQ86TL0 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
ATG4DQ86TL0 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
ATG4DQ86TL0 SNORD78.1-201ENST00000390866 65 ntBASIC3.08□□□□□ -1.92
ATG4DQ86TL0 BX510359.1-201ENST00000456973 237 ntBASIC3.08□□□□□ -1.92
ATG4DQ86TL0 RNU6ATAC17P-201ENST00000516074 71 ntBASIC3.08□□□□□ -1.92
ATG4DQ86TL0 RNU6-1149P-201ENST00000516810 97 ntBASIC3.08□□□□□ -1.92
ATG4DQ86TL0 IGKV2-26-201ENST00000518305 343 ntBASIC3.08□□□□□ -1.92
ATG4DQ86TL0 MIR3200-201ENST00000580767 85 ntBASIC3.08□□□□□ -1.92
ATG4DQ86TL0 MIR3117-201ENST00000584034 78 ntBASIC3.08□□□□□ -1.92
ATG4DQ86TL0 AC107294.3-201ENST00000609211 526 ntBASIC3.08□□□□□ -1.92
ATG4DQ86TL0 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.08□□□□□ -1.92
ATG4DQ86TL0 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.08□□□□□ -1.92
ATG4DQ86TL0 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC3.08□□□□□ -1.92
ATG4DQ86TL0 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
ATG4DQ86TL0 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
ATG4DQ86TL0 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.07□□□□□ -1.92
ATG4DQ86TL0 SNORA31-201ENST00000362607 130 ntBASIC3.07□□□□□ -1.92
ATG4DQ86TL0 RNA5SP50-201ENST00000363731 107 ntBASIC3.07□□□□□ -1.92
ATG4DQ86TL0 RNU6-1138P-201ENST00000365359 106 ntBASIC3.07□□□□□ -1.92
ATG4DQ86TL0 Y_RNA.362-201ENST00000365518 110 ntBASIC3.07□□□□□ -1.92
ATG4DQ86TL0 RNU6-975P-201ENST00000384296 105 ntBASIC3.07□□□□□ -1.92
ATG4DQ86TL0 MTATP8P2-201ENST00000435212 202 ntBASIC3.07□□□□□ -1.92
ATG4DQ86TL0 RPS27P22-201ENST00000478056 241 ntBASIC3.07□□□□□ -1.92
ATG4DQ86TL0 AC005921.1-201ENST00000510589 286 ntBASIC3.07□□□□□ -1.92
ATG4DQ86TL0 AC011406.1-201ENST00000512440 370 ntBASIC3.07□□□□□ -1.92
ATG4DQ86TL0 RNU6-1146P-201ENST00000516282 102 ntBASIC3.07□□□□□ -1.92
ATG4DQ86TL0 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.07□□□□□ -1.92
ATG4DQ86TL0 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.07□□□□□ -1.92
ATG4DQ86TL0 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.07□□□□□ -1.92
ATG4DQ86TL0 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.07□□□□□ -1.92
ATG4DQ86TL0 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC3.07□□□□□ -1.92
ATG4DQ86TL0 SNORD115-40-201ENST00000606510 82 ntBASIC3.07□□□□□ -1.92
ATG4DQ86TL0 MIR8058-201ENST00000615737 89 ntBASIC3.07□□□□□ -1.92
ATG4DQ86TL0 MALAT1.1-201ENST00000618249 95 ntBASIC3.07□□□□□ -1.92
ATG4DQ86TL0 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC3.07□□□□□ -1.92
ATG4DQ86TL0 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
ATG4DQ86TL0 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.07□□□□□ -1.92
ATG4DQ86TL0 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
ATG4DQ86TL0 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.07□□□□□ -1.92
ATG4DQ86TL0 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
ATG4DQ86TL0 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
ATG4DQ86TL0 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
ATG4DQ86TL0 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
ATG4DQ86TL0 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
ATG4DQ86TL0 RNY1P10-201ENST00000363268 113 ntBASIC3.06□□□□□ -1.92
ATG4DQ86TL0 RNA5SP72-201ENST00000364442 117 ntBASIC3.06□□□□□ -1.92
ATG4DQ86TL0 RNU6-1152P-201ENST00000384576 107 ntBASIC3.06□□□□□ -1.92
ATG4DQ86TL0 MIR300-201ENST00000401138 83 ntBASIC3.06□□□□□ -1.92
ATG4DQ86TL0 AL117342.1-201ENST00000404861 406 ntBASIC3.06□□□□□ -1.92
ATG4DQ86TL0 AC006539.3-201ENST00000454258 129 ntBASIC3.06□□□□□ -1.92
ATG4DQ86TL0 RNU6-504P-201ENST00000516568 104 ntBASIC3.06□□□□□ -1.92
ATG4DQ86TL0 RNU6-1270P-201ENST00000517128 108 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 127.2 ms