Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.5□□□□□ -1.85
USP11P51784 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.49□□□□□ -1.85
USP11P51784 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
USP11P51784 U8.1-201ENST00000362843 134 ntBASIC3.49□□□□□ -1.85
USP11P51784 RNU6-978P-201ENST00000364371 103 ntBASIC3.49□□□□□ -1.85
USP11P51784 SNORD32B-201ENST00000364460 84 ntBASIC3.49□□□□□ -1.85
USP11P51784 RNU1-57P-201ENST00000384491 166 ntBASIC3.49□□□□□ -1.85
USP11P51784 RNU6-750P-201ENST00000390946 107 ntBASIC3.49□□□□□ -1.85
USP11P51784 Y_RNA.587-201ENST00000391210 103 ntBASIC3.49□□□□□ -1.85
USP11P51784 RN7SKP101-201ENST00000411376 320 ntBASIC3.49□□□□□ -1.85
USP11P51784 AC063976.4-201ENST00000421971 163 ntBASIC3.49□□□□□ -1.85
USP11P51784 AL158147.1-201ENST00000443970 75 ntBASIC3.49□□□□□ -1.85
USP11P51784 RPL27AP5-201ENST00000469428 449 ntBASIC3.49□□□□□ -1.85
USP11P51784 AC090142.3-201ENST00000519012 385 ntBASIC3.49□□□□□ -1.85
USP11P51784 MIR3121-201ENST00000579680 77 ntBASIC3.49□□□□□ -1.85
USP11P51784 POLR3GP1-201ENST00000594073 261 ntBASIC3.49□□□□□ -1.85
USP11P51784 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
USP11P51784 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
USP11P51784 SNORA54-201ENST00000384281 123 ntBASIC3.48□□□□□ -1.85
USP11P51784 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
USP11P51784 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.48□□□□□ -1.85
USP11P51784 AL441985.1-201ENST00000457727 251 ntBASIC3.48□□□□□ -1.85
USP11P51784 RNU7-23P-201ENST00000459465 62 ntBASIC3.48□□□□□ -1.85
USP11P51784 SNORD33.1-201ENST00000516213 88 ntBASIC3.48□□□□□ -1.85
USP11P51784 RN7SKP282-201ENST00000516824 299 ntBASIC3.48□□□□□ -1.85
USP11P51784 AC026241.1-201ENST00000517873 2142 ntBASIC3.48□□□□□ -1.85
USP11P51784 AC245166.1-201ENST00000521012 253 ntBASIC3.48□□□□□ -1.85
USP11P51784 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.48□□□□□ -1.85
USP11P51784 AL021707.8-201ENST00000609428 183 ntBASIC3.48□□□□□ -1.85
USP11P51784 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
USP11P51784 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
USP11P51784 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
USP11P51784 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.47□□□□□ -1.85
USP11P51784 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
USP11P51784 MIR22-201ENST00000362190 85 ntBASIC3.47□□□□□ -1.85
USP11P51784 MIR422A-201ENST00000362286 90 ntBASIC3.47□□□□□ -1.85
USP11P51784 SNORA27.1-201ENST00000362604 124 ntBASIC3.47□□□□□ -1.85
USP11P51784 RNU6-1164P-201ENST00000364428 107 ntBASIC3.47□□□□□ -1.85
USP11P51784 RNU6-484P-201ENST00000384016 107 ntBASIC3.47□□□□□ -1.85
USP11P51784 SNORD67-201ENST00000390833 111 ntBASIC3.47□□□□□ -1.85
USP11P51784 RNU1-101P-201ENST00000391171 127 ntBASIC3.47□□□□□ -1.85
USP11P51784 AL031121.1-201ENST00000406553 254 ntBASIC3.47□□□□□ -1.85
USP11P51784 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.47□□□□□ -1.85
USP11P51784 AC245047.4-201ENST00000433189 144 ntBASIC3.47□□□□□ -1.85
USP11P51784 S100A11P2-201ENST00000467589 312 ntBASIC3.47□□□□□ -1.85
USP11P51784 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.47□□□□□ -1.85
USP11P51784 AC079598.5-201ENST00000547460 117 ntBASIC3.47□□□□□ -1.85
USP11P51784 Y_RNA.757-201ENST00000578934 114 ntBASIC3.47□□□□□ -1.85
USP11P51784 MIR4325-201ENST00000583049 90 ntBASIC3.47□□□□□ -1.85
USP11P51784 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.47□□□□□ -1.85
USP11P51784 Z82209.1-201ENST00000422141 2135 ntBASIC3.47□□□□□ -1.85
USP11P51784 AL035425.3-201ENST00000564206 4996 ntBASIC3.47□□□□□ -1.85
USP11P51784 AL159152.1-201ENST00000635019 2587 ntBASIC3.46□□□□□ -1.86
USP11P51784 AL356292.1-201ENST00000283110 373 ntBASIC3.46□□□□□ -1.86
USP11P51784 SNORA71.1-201ENST00000364523 117 ntBASIC3.46□□□□□ -1.86
USP11P51784 RNA5SP89-201ENST00000410300 108 ntBASIC3.46□□□□□ -1.86
USP11P51784 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.46□□□□□ -1.86
USP11P51784 SNORD65B-201ENST00000459126 73 ntBASIC3.46□□□□□ -1.86
USP11P51784 RNU6-437P-201ENST00000459408 95 ntBASIC3.46□□□□□ -1.86
USP11P51784 RPL36AP21-201ENST00000490372 323 ntBASIC3.46□□□□□ -1.86
USP11P51784 RPL23AP54-201ENST00000495129 419 ntBASIC3.46□□□□□ -1.86
USP11P51784 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC3.46□□□□□ -1.86
USP11P51784 RNA5SP385-201ENST00000515947 110 ntBASIC3.46□□□□□ -1.86
USP11P51784 RNU6-197P-201ENST00000516680 100 ntBASIC3.46□□□□□ -1.86
USP11P51784 SCARNA15.3-201ENST00000626315 122 ntBASIC3.46□□□□□ -1.86
USP11P51784 SCARNA4.1-201ENST00000628597 123 ntBASIC3.46□□□□□ -1.86
USP11P51784 U6.95-201ENST00000636931 70 ntBASIC3.46□□□□□ -1.86
USP11P51784 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
USP11P51784 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC3.46□□□□□ -1.86
USP11P51784 AP003122.5-201ENST00000527668 3766 ntBASIC3.46□□□□□ -1.86
USP11P51784 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
USP11P51784 AC010680.1-201ENST00000590024 3590 ntBASIC3.46□□□□□ -1.86
USP11P51784 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.46□□□□□ -1.86
USP11P51784 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
USP11P51784 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
USP11P51784 AL355596.1-201ENST00000565399 3996 ntBASIC3.45□□□□□ -1.86
USP11P51784 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
USP11P51784 RNU6-508P-201ENST00000363231 103 ntBASIC3.45□□□□□ -1.86
USP11P51784 Y_RNA.114-201ENST00000363265 113 ntBASIC3.45□□□□□ -1.86
USP11P51784 RNU6-674P-201ENST00000363831 107 ntBASIC3.45□□□□□ -1.86
USP11P51784 SNORD14D-201ENST00000384390 87 ntBASIC3.45□□□□□ -1.86
USP11P51784 AL135786.1-201ENST00000415892 214 ntBASIC3.45□□□□□ -1.86
USP11P51784 MLLT10P1-201ENST00000418346 262 ntBASIC3.45□□□□□ -1.86
USP11P51784 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC3.45□□□□□ -1.86
USP11P51784 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.45□□□□□ -1.86
USP11P51784 RPS26P55-201ENST00000471178 356 ntBASIC3.45□□□□□ -1.86
USP11P51784 RN7SL20P-201ENST00000488827 297 ntBASIC3.45□□□□□ -1.86
USP11P51784 Y_RNA.692-201ENST00000516627 105 ntBASIC3.45□□□□□ -1.86
USP11P51784 RNU6-63P-201ENST00000516690 95 ntBASIC3.45□□□□□ -1.86
USP11P51784 SNORA31.26-201ENST00000517250 137 ntBASIC3.45□□□□□ -1.86
USP11P51784 RNU2-60P-201ENST00000517290 128 ntBASIC3.45□□□□□ -1.86
USP11P51784 RPL30P11-203ENST00000598995 310 ntBASIC3.45□□□□□ -1.86
USP11P51784 AC005972.2-201ENST00000604690 348 ntBASIC3.45□□□□□ -1.86
USP11P51784 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.44□□□□□ -1.86
USP11P51784 AL021368.2-201ENST00000606125 5352 ntBASIC3.44□□□□□ -1.86
USP11P51784 AC073325.2-201ENST00000339545 159 ntBASIC3.44□□□□□ -1.86
USP11P51784 Y_RNA.120-201ENST00000363304 110 ntBASIC3.44□□□□□ -1.86
USP11P51784 RNA5SP496-201ENST00000391240 109 ntBASIC3.44□□□□□ -1.86
USP11P51784 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.44□□□□□ -1.86
USP11P51784 RNU7-57P-201ENST00000459540 60 ntBASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms