Protein–RNA interactions for Protein: Q9ULD4

BRPF3, Bromodomain and PHD finger-containing protein 3, humanhuman

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3Q9ULD4 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.68□□□□□ -1.82
BRPF3Q9ULD4 Y_RNA.802-201ENST00000614892 130 ntBASIC3.68□□□□□ -1.82
BRPF3Q9ULD4 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
BRPF3Q9ULD4 Y_RNA.23-201ENST00000362496 106 ntBASIC3.67□□□□□ -1.82
BRPF3Q9ULD4 Y_RNA.172-201ENST00000363765 102 ntBASIC3.67□□□□□ -1.82
BRPF3Q9ULD4 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.67□□□□□ -1.82
BRPF3Q9ULD4 SUMO1P4-201ENST00000429430 302 ntBASIC3.67□□□□□ -1.82
BRPF3Q9ULD4 RPS29P6-201ENST00000438196 145 ntBASIC3.67□□□□□ -1.82
BRPF3Q9ULD4 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.67□□□□□ -1.82
BRPF3Q9ULD4 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.67□□□□□ -1.82
BRPF3Q9ULD4 TMSB4XP3-201ENST00000445144 114 ntBASIC3.67□□□□□ -1.82
BRPF3Q9ULD4 AC016925.1-201ENST00000458303 298 ntBASIC3.67□□□□□ -1.82
BRPF3Q9ULD4 RN7SKP164-201ENST00000516138 266 ntBASIC3.67□□□□□ -1.82
BRPF3Q9ULD4 MIR3117-201ENST00000584034 78 ntBASIC3.67□□□□□ -1.82
BRPF3Q9ULD4 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
BRPF3Q9ULD4 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
BRPF3Q9ULD4 RNU6-1205P-201ENST00000363625 106 ntBASIC3.66□□□□□ -1.82
BRPF3Q9ULD4 MIR613-201ENST00000385248 95 ntBASIC3.66□□□□□ -1.82
BRPF3Q9ULD4 RNU4-47P-201ENST00000410876 114 ntBASIC3.66□□□□□ -1.82
BRPF3Q9ULD4 SNORD65B-201ENST00000459126 73 ntBASIC3.66□□□□□ -1.82
BRPF3Q9ULD4 Y_RNA.797-201ENST00000515977 94 ntBASIC3.66□□□□□ -1.82
BRPF3Q9ULD4 RNU6-948P-201ENST00000516374 107 ntBASIC3.66□□□□□ -1.82
BRPF3Q9ULD4 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.66□□□□□ -1.82
BRPF3Q9ULD4 AL356280.1-201ENST00000603614 379 ntBASIC3.66□□□□□ -1.82
BRPF3Q9ULD4 AC004832.4-201ENST00000608952 331 ntBASIC3.66□□□□□ -1.82
BRPF3Q9ULD4 MIR5739-201ENST00000619803 80 ntBASIC3.66□□□□□ -1.82
BRPF3Q9ULD4 MIR1248-201ENST00000629190 106 ntBASIC3.66□□□□□ -1.82
BRPF3Q9ULD4 AC132825.6-201ENST00000638861 357 ntBASIC3.66□□□□□ -1.82
BRPF3Q9ULD4 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC3.66□□□□□ -1.82
BRPF3Q9ULD4 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
BRPF3Q9ULD4 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.65□□□□□ -1.82
BRPF3Q9ULD4 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.82
BRPF3Q9ULD4 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
BRPF3Q9ULD4 SNORA27.1-201ENST00000362604 124 ntBASIC3.65□□□□□ -1.83
BRPF3Q9ULD4 snoU2_19.4-201ENST00000364329 80 ntBASIC3.65□□□□□ -1.83
BRPF3Q9ULD4 RNU6-1130P-201ENST00000365434 107 ntBASIC3.65□□□□□ -1.83
BRPF3Q9ULD4 RNU6-438P-201ENST00000365561 103 ntBASIC3.65□□□□□ -1.83
BRPF3Q9ULD4 SNORD116-18-201ENST00000383961 92 ntBASIC3.65□□□□□ -1.83
BRPF3Q9ULD4 Y_RNA.580-201ENST00000391004 95 ntBASIC3.65□□□□□ -1.83
BRPF3Q9ULD4 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.65□□□□□ -1.83
BRPF3Q9ULD4 SEPT7P4-201ENST00000437076 306 ntBASIC3.65□□□□□ -1.83
BRPF3Q9ULD4 HSPE1P21-201ENST00000438283 308 ntBASIC3.65□□□□□ -1.83
BRPF3Q9ULD4 CYP2C59P-201ENST00000457790 269 ntBASIC3.65□□□□□ -1.83
BRPF3Q9ULD4 AC010598.1-201ENST00000510378 103 ntBASIC3.65□□□□□ -1.83
BRPF3Q9ULD4 AL159152.1-201ENST00000635019 2587 ntBASIC3.65□□□□□ -1.83
BRPF3Q9ULD4 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.64□□□□□ -1.83
BRPF3Q9ULD4 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
BRPF3Q9ULD4 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
BRPF3Q9ULD4 Y_RNA.24-201ENST00000362508 103 ntBASIC3.64□□□□□ -1.83
BRPF3Q9ULD4 RNU6-103P-201ENST00000363686 107 ntBASIC3.64□□□□□ -1.83
BRPF3Q9ULD4 RNU6-271P-201ENST00000363858 105 ntBASIC3.64□□□□□ -1.83
BRPF3Q9ULD4 RNU6-275P-201ENST00000364910 107 ntBASIC3.64□□□□□ -1.83
BRPF3Q9ULD4 Y_RNA.357-201ENST00000365487 109 ntBASIC3.64□□□□□ -1.83
BRPF3Q9ULD4 RNU6-546P-201ENST00000383991 107 ntBASIC3.64□□□□□ -1.83
BRPF3Q9ULD4 RNU6-418P-201ENST00000384035 107 ntBASIC3.64□□□□□ -1.83
BRPF3Q9ULD4 SNORA54-201ENST00000384281 123 ntBASIC3.64□□□□□ -1.83
BRPF3Q9ULD4 Y_RNA.572-201ENST00000384757 98 ntBASIC3.64□□□□□ -1.83
BRPF3Q9ULD4 SNORD67-201ENST00000390833 111 ntBASIC3.64□□□□□ -1.83
BRPF3Q9ULD4 RNU2-32P-201ENST00000411193 191 ntBASIC3.64□□□□□ -1.83
BRPF3Q9ULD4 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC3.64□□□□□ -1.83
BRPF3Q9ULD4 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.64□□□□□ -1.83
BRPF3Q9ULD4 HMGN2P18-201ENST00000450680 270 ntBASIC3.64□□□□□ -1.83
BRPF3Q9ULD4 HSPE1P13-201ENST00000451143 297 ntBASIC3.64□□□□□ -1.83
BRPF3Q9ULD4 EEF1B2P7-201ENST00000451177 676 ntBASIC3.64□□□□□ -1.83
BRPF3Q9ULD4 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.64□□□□□ -1.83
BRPF3Q9ULD4 RNU6-1337P-201ENST00000516525 95 ntBASIC3.64□□□□□ -1.83
BRPF3Q9ULD4 MIR5004-201ENST00000579078 107 ntBASIC3.64□□□□□ -1.83
BRPF3Q9ULD4 AC007179.3-201ENST00000604976 235 ntBASIC3.64□□□□□ -1.83
BRPF3Q9ULD4 MTND1P7-201ENST00000632801 297 ntBASIC3.64□□□□□ -1.83
BRPF3Q9ULD4 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC3.64□□□□□ -1.83
BRPF3Q9ULD4 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.64□□□□□ -1.83
BRPF3Q9ULD4 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.64□□□□□ -1.83
BRPF3Q9ULD4 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.63□□□□□ -1.83
BRPF3Q9ULD4 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.63□□□□□ -1.83
BRPF3Q9ULD4 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.63□□□□□ -1.83
BRPF3Q9ULD4 RNU6-407P-201ENST00000365280 104 ntBASIC3.63□□□□□ -1.83
BRPF3Q9ULD4 MIR526A2-201ENST00000390198 65 ntBASIC3.63□□□□□ -1.83
BRPF3Q9ULD4 AL161788.1-201ENST00000441805 169 ntBASIC3.63□□□□□ -1.83
BRPF3Q9ULD4 RPS26P55-201ENST00000471178 356 ntBASIC3.63□□□□□ -1.83
BRPF3Q9ULD4 CKS1BP2-201ENST00000497342 240 ntBASIC3.63□□□□□ -1.83
BRPF3Q9ULD4 AC005840.1-201ENST00000498412 377 ntBASIC3.63□□□□□ -1.83
BRPF3Q9ULD4 AC027419.1-201ENST00000522976 328 ntBASIC3.63□□□□□ -1.83
BRPF3Q9ULD4 AC022616.8-201ENST00000533569 253 ntBASIC3.63□□□□□ -1.83
BRPF3Q9ULD4 MIR4744-201ENST00000581563 82 ntBASIC3.63□□□□□ -1.83
BRPF3Q9ULD4 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
BRPF3Q9ULD4 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.63□□□□□ -1.83
BRPF3Q9ULD4 RPL12P50-201ENST00000603116 116 ntBASIC3.63□□□□□ -1.83
BRPF3Q9ULD4 AL161756.2-201ENST00000604597 246 ntBASIC3.63□□□□□ -1.83
BRPF3Q9ULD4 AC013412.1-201ENST00000610687 192 ntBASIC3.63□□□□□ -1.83
BRPF3Q9ULD4 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
BRPF3Q9ULD4 AC068647.2-201ENST00000637380 353 ntBASIC3.63□□□□□ -1.83
BRPF3Q9ULD4 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.62□□□□□ -1.83
BRPF3Q9ULD4 RNU6-704P-201ENST00000364162 103 ntBASIC3.62□□□□□ -1.83
BRPF3Q9ULD4 RNU4-84P-201ENST00000364200 139 ntBASIC3.62□□□□□ -1.83
BRPF3Q9ULD4 U8.7-201ENST00000364940 136 ntBASIC3.62□□□□□ -1.83
BRPF3Q9ULD4 RNA5SP240-201ENST00000365355 128 ntBASIC3.62□□□□□ -1.83
BRPF3Q9ULD4 RNU6-969P-201ENST00000383900 105 ntBASIC3.62□□□□□ -1.83
BRPF3Q9ULD4 RNU6-1235P-201ENST00000384559 107 ntBASIC3.62□□□□□ -1.83
BRPF3Q9ULD4 RNU6-578P-201ENST00000390980 103 ntBASIC3.62□□□□□ -1.83
BRPF3Q9ULD4 RNU6-498P-201ENST00000459468 107 ntBASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms