Protein–RNA interactions for Protein: Q9UJK0

TSR3, Ribosome biogenesis protein TSR3 homolog, humanhuman

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSR3Q9UJK0 IFITM8P-201ENST00000522529 394 ntBASIC4.13□□□□□ -1.75
TSR3Q9UJK0 CYP4A43P-201ENST00000568156 121 ntBASIC4.13□□□□□ -1.75
TSR3Q9UJK0 AC006441.5-201ENST00000612680 209 ntBASIC4.13□□□□□ -1.75
TSR3Q9UJK0 MIR7154-201ENST00000620673 73 ntBASIC4.13□□□□□ -1.75
TSR3Q9UJK0 MFSD8-236ENST00000641509 4050 ntBASIC4.13□□□□□ -1.75
TSR3Q9UJK0 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC4.12□□□□□ -1.75
TSR3Q9UJK0 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC4.12□□□□□ -1.75
TSR3Q9UJK0 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
TSR3Q9UJK0 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC4.12□□□□□ -1.75
TSR3Q9UJK0 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
TSR3Q9UJK0 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
TSR3Q9UJK0 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
TSR3Q9UJK0 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.12□□□□□ -1.75
TSR3Q9UJK0 MIR448-201ENST00000362131 111 ntBASIC4.12□□□□□ -1.75
TSR3Q9UJK0 SNORD116-10-201ENST00000363791 102 ntBASIC4.12□□□□□ -1.75
TSR3Q9UJK0 Y_RNA.377-201ENST00000365644 108 ntBASIC4.12□□□□□ -1.75
TSR3Q9UJK0 RNU6-1274P-201ENST00000384557 107 ntBASIC4.12□□□□□ -1.75
TSR3Q9UJK0 RNU6-1186P-201ENST00000410429 97 ntBASIC4.12□□□□□ -1.75
TSR3Q9UJK0 RNU2-40P-201ENST00000410833 196 ntBASIC4.12□□□□□ -1.75
TSR3Q9UJK0 AL512326.2-201ENST00000426359 151 ntBASIC4.12□□□□□ -1.75
TSR3Q9UJK0 Z98742.2-201ENST00000431564 187 ntBASIC4.12□□□□□ -1.75
TSR3Q9UJK0 AL445646.1-201ENST00000431784 216 ntBASIC4.12□□□□□ -1.75
TSR3Q9UJK0 FTH1P12-201ENST00000432137 551 ntBASIC4.12□□□□□ -1.75
TSR3Q9UJK0 RNU6-1006P-201ENST00000516998 103 ntBASIC4.12□□□□□ -1.75
TSR3Q9UJK0 AC002984.1-201ENST00000591692 448 ntBASIC4.12□□□□□ -1.75
TSR3Q9UJK0 MIR7641-1-201ENST00000627518 61 ntBASIC4.12□□□□□ -1.75
TSR3Q9UJK0 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC4.12□□□□□ -1.75
TSR3Q9UJK0 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
TSR3Q9UJK0 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC4.12□□□□□ -1.75
TSR3Q9UJK0 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.11□□□□□ -1.75
TSR3Q9UJK0 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
TSR3Q9UJK0 MIR522-201ENST00000385071 87 ntBASIC4.11□□□□□ -1.75
TSR3Q9UJK0 MIR1179-201ENST00000408703 91 ntBASIC4.11□□□□□ -1.75
TSR3Q9UJK0 RPL32P35-201ENST00000415214 394 ntBASIC4.11□□□□□ -1.75
TSR3Q9UJK0 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC4.11□□□□□ -1.75
TSR3Q9UJK0 AC009220.1-201ENST00000451614 275 ntBASIC4.11□□□□□ -1.75
TSR3Q9UJK0 HMGN2P7-201ENST00000456186 273 ntBASIC4.11□□□□□ -1.75
TSR3Q9UJK0 RPL23AP63-201ENST00000498752 471 ntBASIC4.11□□□□□ -1.75
TSR3Q9UJK0 RNU1-61P-201ENST00000516107 151 ntBASIC4.11□□□□□ -1.75
TSR3Q9UJK0 SNORA31.9-201ENST00000516429 84 ntBASIC4.11□□□□□ -1.75
TSR3Q9UJK0 IGHVII-40-1-201ENST00000517316 58 ntBASIC4.11□□□□□ -1.75
TSR3Q9UJK0 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.11□□□□□ -1.75
TSR3Q9UJK0 AC004812.1-201ENST00000540773 146 ntBASIC4.11□□□□□ -1.75
TSR3Q9UJK0 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
TSR3Q9UJK0 MIR3939-201ENST00000582614 106 ntBASIC4.11□□□□□ -1.75
TSR3Q9UJK0 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC4.11□□□□□ -1.75
TSR3Q9UJK0 Clostridiales-1.3-201ENST00000637703 147 ntBASIC4.11□□□□□ -1.75
TSR3Q9UJK0 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
TSR3Q9UJK0 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
TSR3Q9UJK0 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
TSR3Q9UJK0 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
TSR3Q9UJK0 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.1□□□□□ -1.75
TSR3Q9UJK0 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4.1□□□□□ -1.75
TSR3Q9UJK0 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.1□□□□□ -1.75
TSR3Q9UJK0 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC4.1□□□□□ -1.75
TSR3Q9UJK0 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
TSR3Q9UJK0 AC018630.2-201ENST00000534866 2403 ntBASIC4.1□□□□□ -1.75
TSR3Q9UJK0 AP003122.5-201ENST00000527668 3766 ntBASIC4.1□□□□□ -1.75
TSR3Q9UJK0 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
TSR3Q9UJK0 Y_RNA.267-201ENST00000364679 109 ntBASIC4.1□□□□□ -1.75
TSR3Q9UJK0 SNORD58A-201ENST00000383875 65 ntBASIC4.1□□□□□ -1.75
TSR3Q9UJK0 RNU6-198P-201ENST00000384258 104 ntBASIC4.1□□□□□ -1.75
TSR3Q9UJK0 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC4.1□□□□□ -1.75
TSR3Q9UJK0 AP001486.1-201ENST00000463339 476 ntBASIC4.1□□□□□ -1.75
TSR3Q9UJK0 RN7SL481P-201ENST00000477764 299 ntBASIC4.1□□□□□ -1.75
TSR3Q9UJK0 CYCSP29-201ENST00000533731 318 ntBASIC4.1□□□□□ -1.75
TSR3Q9UJK0 AC091544.4-201ENST00000555268 342 ntBASIC4.1□□□□□ -1.75
TSR3Q9UJK0 MIR3138-201ENST00000585238 82 ntBASIC4.1□□□□□ -1.75
TSR3Q9UJK0 MIR378J-201ENST00000611988 109 ntBASIC4.1□□□□□ -1.75
TSR3Q9UJK0 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
TSR3Q9UJK0 UBE3AP2-201ENST00000429033 2259 ntBASIC4.1□□□□□ -1.75
TSR3Q9UJK0 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
TSR3Q9UJK0 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
TSR3Q9UJK0 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.1□□□□□ -1.75
TSR3Q9UJK0 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
TSR3Q9UJK0 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.09□□□□□ -1.75
TSR3Q9UJK0 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.09□□□□□ -1.75
TSR3Q9UJK0 SNORD35B-201ENST00000363660 87 ntBASIC4.09□□□□□ -1.75
TSR3Q9UJK0 RNU6-1201P-201ENST00000384227 107 ntBASIC4.09□□□□□ -1.75
TSR3Q9UJK0 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
TSR3Q9UJK0 RN7SKP200-201ENST00000410564 320 ntBASIC4.09□□□□□ -1.75
TSR3Q9UJK0 RNU4-69P-201ENST00000410677 143 ntBASIC4.09□□□□□ -1.75
TSR3Q9UJK0 RNA5SP144-201ENST00000410846 116 ntBASIC4.09□□□□□ -1.75
TSR3Q9UJK0 Y_RNA.625-201ENST00000411256 107 ntBASIC4.09□□□□□ -1.75
TSR3Q9UJK0 RPS15AP28-201ENST00000435088 386 ntBASIC4.09□□□□□ -1.75
TSR3Q9UJK0 SNORA71B-202ENST00000439232 272 ntBASIC4.09□□□□□ -1.75
TSR3Q9UJK0 AC025554.1-201ENST00000505641 188 ntBASIC4.09□□□□□ -1.75
TSR3Q9UJK0 AP003484.1-201ENST00000530974 250 ntBASIC4.09□□□□□ -1.75
TSR3Q9UJK0 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.09□□□□□ -1.75
TSR3Q9UJK0 U2.20-201ENST00000613956 192 ntBASIC4.09□□□□□ -1.75
TSR3Q9UJK0 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
TSR3Q9UJK0 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
TSR3Q9UJK0 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.08□□□□□ -1.76
TSR3Q9UJK0 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
TSR3Q9UJK0 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.08□□□□□ -1.76
TSR3Q9UJK0 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
TSR3Q9UJK0 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.08□□□□□ -1.76
TSR3Q9UJK0 RNA5SP388-201ENST00000362584 119 ntBASIC4.08□□□□□ -1.76
TSR3Q9UJK0 RNU6-1229P-201ENST00000364295 107 ntBASIC4.08□□□□□ -1.76
TSR3Q9UJK0 RNU6-442P-201ENST00000383968 104 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms