Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.45□□□□□ -2.18
LINC01006Q8NI28 SNORA16B-201ENST00000364674 135 ntBASIC1.45□□□□□ -2.18
LINC01006Q8NI28 RNA5SP160-201ENST00000364866 120 ntBASIC1.45□□□□□ -2.18
LINC01006Q8NI28 RNY3P4-201ENST00000384428 101 ntBASIC1.45□□□□□ -2.18
LINC01006Q8NI28 MIR518A2-201ENST00000384966 87 ntBASIC1.45□□□□□ -2.18
LINC01006Q8NI28 MIR597-201ENST00000384968 97 ntBASIC1.45□□□□□ -2.18
LINC01006Q8NI28 MIR9-3-201ENST00000385084 90 ntBASIC1.45□□□□□ -2.18
LINC01006Q8NI28 AL627390.1-201ENST00000396055 340 ntBASIC1.45□□□□□ -2.18
LINC01006Q8NI28 MIR300-201ENST00000401138 83 ntBASIC1.45□□□□□ -2.18
LINC01006Q8NI28 ELOCP21-201ENST00000412558 336 ntBASIC1.45□□□□□ -2.18
LINC01006Q8NI28 UQCRBP2-201ENST00000447827 297 ntBASIC1.45□□□□□ -2.18
LINC01006Q8NI28 SNORD13-201ENST00000459299 104 ntBASIC1.45□□□□□ -2.18
LINC01006Q8NI28 RNU6-911P-201ENST00000516523 104 ntBASIC1.45□□□□□ -2.18
LINC01006Q8NI28 RNU1-40P-201ENST00000516816 164 ntBASIC1.45□□□□□ -2.18
LINC01006Q8NI28 RNU1-97P-201ENST00000516872 164 ntBASIC1.45□□□□□ -2.18
LINC01006Q8NI28 AC007229.1-201ENST00000590455 412 ntBASIC1.45□□□□□ -2.18
LINC01006Q8NI28 AL109918.3-201ENST00000603072 338 ntBASIC1.45□□□□□ -2.18
LINC01006Q8NI28 AC016925.2-201ENST00000605108 242 ntBASIC1.45□□□□□ -2.18
LINC01006Q8NI28 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.45□□□□□ -2.18
LINC01006Q8NI28 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.45□□□□□ -2.18
LINC01006Q8NI28 LINC02555-201ENST00000563933 1951 ntBASIC1.45□□□□□ -2.18
LINC01006Q8NI28 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.45□□□□□ -2.18
LINC01006Q8NI28 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
LINC01006Q8NI28 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.44□□□□□ -2.18
LINC01006Q8NI28 Y_RNA.27-201ENST00000362540 103 ntBASIC1.44□□□□□ -2.18
LINC01006Q8NI28 RNU6-961P-201ENST00000363893 105 ntBASIC1.44□□□□□ -2.18
LINC01006Q8NI28 RNU6-975P-201ENST00000384296 105 ntBASIC1.44□□□□□ -2.18
LINC01006Q8NI28 MIR1283-2-201ENST00000408621 87 ntBASIC1.44□□□□□ -2.18
LINC01006Q8NI28 RNU6-57P-201ENST00000411348 103 ntBASIC1.44□□□□□ -2.18
LINC01006Q8NI28 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.44□□□□□ -2.18
LINC01006Q8NI28 RNU7-57P-201ENST00000459540 60 ntBASIC1.44□□□□□ -2.18
LINC01006Q8NI28 RPL26P26-201ENST00000480251 434 ntBASIC1.44□□□□□ -2.18
LINC01006Q8NI28 SNORA25.10-201ENST00000515926 124 ntBASIC1.44□□□□□ -2.18
LINC01006Q8NI28 RNU6-1053P-201ENST00000515930 101 ntBASIC1.44□□□□□ -2.18
LINC01006Q8NI28 RNU6-1012P-201ENST00000516606 109 ntBASIC1.44□□□□□ -2.18
LINC01006Q8NI28 RNU6-107P-201ENST00000516643 102 ntBASIC1.44□□□□□ -2.18
LINC01006Q8NI28 RNU6-1137P-201ENST00000517073 99 ntBASIC1.44□□□□□ -2.18
LINC01006Q8NI28 MIR2355-201ENST00000517199 87 ntBASIC1.44□□□□□ -2.18
LINC01006Q8NI28 RNU6-988P-201ENST00000519081 107 ntBASIC1.44□□□□□ -2.18
LINC01006Q8NI28 AP005660.1-201ENST00000522972 293 ntBASIC1.44□□□□□ -2.18
LINC01006Q8NI28 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC1.44□□□□□ -2.18
LINC01006Q8NI28 AC055872.1-201ENST00000570978 278 ntBASIC1.44□□□□□ -2.18
LINC01006Q8NI28 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.44□□□□□ -2.18
LINC01006Q8NI28 MIR5694-201ENST00000581190 76 ntBASIC1.44□□□□□ -2.18
LINC01006Q8NI28 AC104695.3-201ENST00000604052 296 ntBASIC1.44□□□□□ -2.18
LINC01006Q8NI28 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.44□□□□□ -2.18
LINC01006Q8NI28 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.44□□□□□ -2.18
LINC01006Q8NI28 AP000553.5-201ENST00000641933 54 ntBASIC1.44□□□□□ -2.18
LINC01006Q8NI28 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.44□□□□□ -2.18
LINC01006Q8NI28 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.44□□□□□ -2.18
LINC01006Q8NI28 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
LINC01006Q8NI28 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
LINC01006Q8NI28 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
LINC01006Q8NI28 MIR378A-201ENST00000362177 66 ntBASIC1.43□□□□□ -2.18
LINC01006Q8NI28 RNU5F-3P-201ENST00000363767 117 ntBASIC1.43□□□□□ -2.18
LINC01006Q8NI28 RNU6-457P-201ENST00000363999 107 ntBASIC1.43□□□□□ -2.18
LINC01006Q8NI28 RNA5SP493-201ENST00000364115 91 ntBASIC1.43□□□□□ -2.18
LINC01006Q8NI28 SNORA33.2-201ENST00000365413 134 ntBASIC1.43□□□□□ -2.18
LINC01006Q8NI28 RNU4-52P-201ENST00000384209 138 ntBASIC1.43□□□□□ -2.18
LINC01006Q8NI28 RNU6-1011P-201ENST00000384668 107 ntBASIC1.43□□□□□ -2.18
LINC01006Q8NI28 SNORD78.2-201ENST00000391076 69 ntBASIC1.43□□□□□ -2.18
LINC01006Q8NI28 MRPL42P3-201ENST00000401492 326 ntBASIC1.43□□□□□ -2.18
LINC01006Q8NI28 RNA5SP247-201ENST00000411181 105 ntBASIC1.43□□□□□ -2.18
LINC01006Q8NI28 AC016909.1-201ENST00000415916 166 ntBASIC1.43□□□□□ -2.18
LINC01006Q8NI28 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.43□□□□□ -2.18
LINC01006Q8NI28 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.43□□□□□ -2.18
LINC01006Q8NI28 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC1.43□□□□□ -2.18
LINC01006Q8NI28 AC090255.1-201ENST00000495779 349 ntBASIC1.43□□□□□ -2.18
LINC01006Q8NI28 RPS29P11-201ENST00000496507 171 ntBASIC1.43□□□□□ -2.18
LINC01006Q8NI28 SNORA40.14-201ENST00000516543 86 ntBASIC1.43□□□□□ -2.18
LINC01006Q8NI28 RNU6-250P-201ENST00000516958 103 ntBASIC1.43□□□□□ -2.18
LINC01006Q8NI28 AC087441.2-201ENST00000529141 262 ntBASIC1.43□□□□□ -2.18
LINC01006Q8NI28 AC040926.1-201ENST00000530195 238 ntBASIC1.43□□□□□ -2.18
LINC01006Q8NI28 AC018448.1-201ENST00000552843 316 ntBASIC1.43□□□□□ -2.18
LINC01006Q8NI28 MIR4659A-201ENST00000580269 81 ntBASIC1.43□□□□□ -2.18
LINC01006Q8NI28 MIR4680-201ENST00000580906 66 ntBASIC1.43□□□□□ -2.18
LINC01006Q8NI28 MIR8081-201ENST00000611533 95 ntBASIC1.43□□□□□ -2.18
LINC01006Q8NI28 AC022513.1-201ENST00000624512 117 ntBASIC1.43□□□□□ -2.18
LINC01006Q8NI28 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.43□□□□□ -2.18
LINC01006Q8NI28 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.43□□□□□ -2.18
LINC01006Q8NI28 AC008555.8-201ENST00000623602 2168 ntBASIC1.42□□□□□ -2.18
LINC01006Q8NI28 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
LINC01006Q8NI28 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.42□□□□□ -2.18
LINC01006Q8NI28 AL596028.1-201ENST00000326971 197 ntBASIC1.42□□□□□ -2.18
LINC01006Q8NI28 RNU6-23P-201ENST00000363283 107 ntBASIC1.42□□□□□ -2.18
LINC01006Q8NI28 Y_RNA.326-201ENST00000365176 113 ntBASIC1.42□□□□□ -2.18
LINC01006Q8NI28 RNA5SP37-201ENST00000365420 130 ntBASIC1.42□□□□□ -2.18
LINC01006Q8NI28 Y_RNA.527-201ENST00000384573 102 ntBASIC1.42□□□□□ -2.18
LINC01006Q8NI28 RNU6-160P-201ENST00000384591 107 ntBASIC1.42□□□□□ -2.18
LINC01006Q8NI28 RNU6-130P-201ENST00000411112 103 ntBASIC1.42□□□□□ -2.18
LINC01006Q8NI28 RNA5SP450-201ENST00000411206 102 ntBASIC1.42□□□□□ -2.18
LINC01006Q8NI28 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.42□□□□□ -2.18
LINC01006Q8NI28 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
LINC01006Q8NI28 RAB28P5-201ENST00000427490 651 ntBASIC1.42□□□□□ -2.18
LINC01006Q8NI28 RPL23AP7-203ENST00000449021 469 ntBASIC1.42□□□□□ -2.18
LINC01006Q8NI28 PCNPP5-201ENST00000452246 481 ntBASIC1.42□□□□□ -2.18
LINC01006Q8NI28 RNU6-625P-201ENST00000459412 107 ntBASIC1.42□□□□□ -2.18
LINC01006Q8NI28 AC079804.2-201ENST00000490376 200 ntBASIC1.42□□□□□ -2.18
LINC01006Q8NI28 RNU6-408P-201ENST00000515910 100 ntBASIC1.42□□□□□ -2.18
LINC01006Q8NI28 RNU6-475P-201ENST00000516073 104 ntBASIC1.42□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms