Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 RNU6-1235P-201ENST00000384559 107 ntBASIC3.75□□□□□ -1.81
LYSMD3Q7Z3D4 U8.11-201ENST00000384699 133 ntBASIC3.75□□□□□ -1.81
LYSMD3Q7Z3D4 MIR7-3-201ENST00000384898 110 ntBASIC3.75□□□□□ -1.81
LYSMD3Q7Z3D4 MTATP8P2-201ENST00000435212 202 ntBASIC3.75□□□□□ -1.81
LYSMD3Q7Z3D4 U8.18-201ENST00000459285 133 ntBASIC3.75□□□□□ -1.81
LYSMD3Q7Z3D4 RNU6-498P-201ENST00000459468 107 ntBASIC3.75□□□□□ -1.81
LYSMD3Q7Z3D4 AL133162.1-201ENST00000463228 453 ntBASIC3.75□□□□□ -1.81
LYSMD3Q7Z3D4 RNU6ATAC17P-201ENST00000516074 71 ntBASIC3.75□□□□□ -1.81
LYSMD3Q7Z3D4 RNU2-58P-201ENST00000516403 183 ntBASIC3.75□□□□□ -1.81
LYSMD3Q7Z3D4 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.75□□□□□ -1.81
LYSMD3Q7Z3D4 MIR4438-201ENST00000585271 93 ntBASIC3.75□□□□□ -1.81
LYSMD3Q7Z3D4 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC3.75□□□□□ -1.81
LYSMD3Q7Z3D4 AL121772.2-201ENST00000614331 297 ntBASIC3.75□□□□□ -1.81
LYSMD3Q7Z3D4 AC002076.2-201ENST00000617362 122 ntBASIC3.75□□□□□ -1.81
LYSMD3Q7Z3D4 Y_RNA.818-201ENST00000618813 71 ntBASIC3.75□□□□□ -1.81
LYSMD3Q7Z3D4 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.75□□□□□ -1.81
LYSMD3Q7Z3D4 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
LYSMD3Q7Z3D4 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
LYSMD3Q7Z3D4 AP003122.5-201ENST00000527668 3766 ntBASIC3.75□□□□□ -1.81
LYSMD3Q7Z3D4 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
LYSMD3Q7Z3D4 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
LYSMD3Q7Z3D4 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.74□□□□□ -1.81
LYSMD3Q7Z3D4 SNORA71.3-201ENST00000362582 128 ntBASIC3.74□□□□□ -1.81
LYSMD3Q7Z3D4 RNU6-888P-201ENST00000363010 101 ntBASIC3.74□□□□□ -1.81
LYSMD3Q7Z3D4 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
LYSMD3Q7Z3D4 RNU6-1152P-201ENST00000384576 107 ntBASIC3.74□□□□□ -1.81
LYSMD3Q7Z3D4 RNA5SP424-201ENST00000390988 115 ntBASIC3.74□□□□□ -1.81
LYSMD3Q7Z3D4 AL031121.1-201ENST00000406553 254 ntBASIC3.74□□□□□ -1.81
LYSMD3Q7Z3D4 AL513477.1-202ENST00000417061 214 ntBASIC3.74□□□□□ -1.81
LYSMD3Q7Z3D4 Z98742.2-201ENST00000431564 187 ntBASIC3.74□□□□□ -1.81
LYSMD3Q7Z3D4 HMGN2P31-201ENST00000432430 273 ntBASIC3.74□□□□□ -1.81
LYSMD3Q7Z3D4 AC006445.1-201ENST00000491925 405 ntBASIC3.74□□□□□ -1.81
LYSMD3Q7Z3D4 RNU6-240P-201ENST00000516098 97 ntBASIC3.74□□□□□ -1.81
LYSMD3Q7Z3D4 RNU6-158P-201ENST00000517104 100 ntBASIC3.74□□□□□ -1.81
LYSMD3Q7Z3D4 IGKV3-31-201ENST00000523109 329 ntBASIC3.74□□□□□ -1.81
LYSMD3Q7Z3D4 SNORD115-40-201ENST00000606510 82 ntBASIC3.74□□□□□ -1.81
LYSMD3Q7Z3D4 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
LYSMD3Q7Z3D4 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.74□□□□□ -1.81
LYSMD3Q7Z3D4 MAPK10-373ENST00000641983 6772 ntBASIC3.74□□□□□ -1.81
LYSMD3Q7Z3D4 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC3.74□□□□□ -1.81
LYSMD3Q7Z3D4 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
LYSMD3Q7Z3D4 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
LYSMD3Q7Z3D4 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
LYSMD3Q7Z3D4 MAPK10-372ENST00000641954 3413 ntBASIC3.73□□□□□ -1.81
LYSMD3Q7Z3D4 SNORD77.3-201ENST00000391113 65 ntBASIC3.73□□□□□ -1.81
LYSMD3Q7Z3D4 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.73□□□□□ -1.81
LYSMD3Q7Z3D4 AC068339.1-201ENST00000526965 141 ntBASIC3.73□□□□□ -1.81
LYSMD3Q7Z3D4 AC008011.1-201ENST00000545989 227 ntBASIC3.73□□□□□ -1.81
LYSMD3Q7Z3D4 MIR5187-201ENST00000583479 76 ntBASIC3.73□□□□□ -1.81
LYSMD3Q7Z3D4 MALAT1.1-201ENST00000618249 95 ntBASIC3.73□□□□□ -1.81
LYSMD3Q7Z3D4 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
LYSMD3Q7Z3D4 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.73□□□□□ -1.81
LYSMD3Q7Z3D4 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.73□□□□□ -1.81
LYSMD3Q7Z3D4 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.72□□□□□ -1.81
LYSMD3Q7Z3D4 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
LYSMD3Q7Z3D4 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
LYSMD3Q7Z3D4 RNU6-414P-201ENST00000363705 104 ntBASIC3.72□□□□□ -1.81
LYSMD3Q7Z3D4 RNU6-944P-201ENST00000364023 107 ntBASIC3.72□□□□□ -1.81
LYSMD3Q7Z3D4 SNORD46.1-201ENST00000364139 104 ntBASIC3.72□□□□□ -1.81
LYSMD3Q7Z3D4 SNORA70.4-201ENST00000365509 134 ntBASIC3.72□□□□□ -1.81
LYSMD3Q7Z3D4 SNORD24-201ENST00000383884 75 ntBASIC3.72□□□□□ -1.81
LYSMD3Q7Z3D4 AC109327.2-201ENST00000448339 378 ntBASIC3.72□□□□□ -1.81
LYSMD3Q7Z3D4 RPS29P21-201ENST00000496272 170 ntBASIC3.72□□□□□ -1.81
LYSMD3Q7Z3D4 RNU6-1146P-201ENST00000516282 102 ntBASIC3.72□□□□□ -1.81
LYSMD3Q7Z3D4 uc_338.32-201ENST00000615087 172 ntBASIC3.72□□□□□ -1.81
LYSMD3Q7Z3D4 AC015726.2-201ENST00000620112 122 ntBASIC3.72□□□□□ -1.81
LYSMD3Q7Z3D4 MIR2052-201ENST00000636055 55 ntBASIC3.72□□□□□ -1.81
LYSMD3Q7Z3D4 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
LYSMD3Q7Z3D4 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
LYSMD3Q7Z3D4 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.71□□□□□ -1.81
LYSMD3Q7Z3D4 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
LYSMD3Q7Z3D4 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.71□□□□□ -1.81
LYSMD3Q7Z3D4 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
LYSMD3Q7Z3D4 MIR494-201ENST00000349529 81 ntBASIC3.71□□□□□ -1.82
LYSMD3Q7Z3D4 RNA5SP119-201ENST00000362715 117 ntBASIC3.71□□□□□ -1.82
LYSMD3Q7Z3D4 RNA5SP124-201ENST00000362739 110 ntBASIC3.71□□□□□ -1.82
LYSMD3Q7Z3D4 SNORD78.1-201ENST00000390866 65 ntBASIC3.71□□□□□ -1.82
LYSMD3Q7Z3D4 Y_RNA.666-201ENST00000516187 112 ntBASIC3.71□□□□□ -1.82
LYSMD3Q7Z3D4 RNU6-830P-201ENST00000516353 107 ntBASIC3.71□□□□□ -1.82
LYSMD3Q7Z3D4 RN7SKP209-201ENST00000516888 304 ntBASIC3.71□□□□□ -1.82
LYSMD3Q7Z3D4 AC134878.1-201ENST00000619901 243 ntBASIC3.71□□□□□ -1.82
LYSMD3Q7Z3D4 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
LYSMD3Q7Z3D4 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
LYSMD3Q7Z3D4 MFSD8-236ENST00000641509 4050 ntBASIC3.71□□□□□ -1.82
LYSMD3Q7Z3D4 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.71□□□□□ -1.82
LYSMD3Q7Z3D4 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.71□□□□□ -1.82
LYSMD3Q7Z3D4 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.7□□□□□ -1.82
LYSMD3Q7Z3D4 Y_RNA.78-201ENST00000362970 110 ntBASIC3.7□□□□□ -1.82
LYSMD3Q7Z3D4 Y_RNA.213-201ENST00000364178 111 ntBASIC3.7□□□□□ -1.82
LYSMD3Q7Z3D4 Y_RNA.219-201ENST00000364232 113 ntBASIC3.7□□□□□ -1.82
LYSMD3Q7Z3D4 RNU6-1274P-201ENST00000384557 107 ntBASIC3.7□□□□□ -1.82
LYSMD3Q7Z3D4 MIR548A2-201ENST00000384956 97 ntBASIC3.7□□□□□ -1.82
LYSMD3Q7Z3D4 SNORA11.1-201ENST00000408133 129 ntBASIC3.7□□□□□ -1.82
LYSMD3Q7Z3D4 RPS26P48-201ENST00000491713 339 ntBASIC3.7□□□□□ -1.82
LYSMD3Q7Z3D4 RNU6-693P-201ENST00000516134 107 ntBASIC3.7□□□□□ -1.82
LYSMD3Q7Z3D4 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.7□□□□□ -1.82
LYSMD3Q7Z3D4 RNY4P20-201ENST00000516678 93 ntBASIC3.7□□□□□ -1.82
LYSMD3Q7Z3D4 RNU6-1096P-201ENST00000517089 102 ntBASIC3.7□□□□□ -1.82
LYSMD3Q7Z3D4 AC026403.1-201ENST00000518938 295 ntBASIC3.7□□□□□ -1.82
LYSMD3Q7Z3D4 AC141557.1-201ENST00000540982 400 ntBASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 115.3 ms