Protein–RNA interactions for Protein: Q70CQ4

USP31, Ubiquitin carboxyl-terminal hydrolase 31, humanhuman

Predictions only

Length 1,352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP31Q70CQ4 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.51□□□□□ -1.85
USP31Q70CQ4 AL365265.1-201ENST00000621045 234 ntBASIC3.51□□□□□ -1.85
USP31Q70CQ4 AC064859.1-201ENST00000624741 174 ntBASIC3.51□□□□□ -1.85
USP31Q70CQ4 AC008264.2-201ENST00000610193 3731 ntBASIC3.5□□□□□ -1.85
USP31Q70CQ4 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.5□□□□□ -1.85
USP31Q70CQ4 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.5□□□□□ -1.85
USP31Q70CQ4 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
USP31Q70CQ4 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.5□□□□□ -1.85
USP31Q70CQ4 RNU6-923P-201ENST00000364753 107 ntBASIC3.5□□□□□ -1.85
USP31Q70CQ4 MIR548M-201ENST00000408260 86 ntBASIC3.5□□□□□ -1.85
USP31Q70CQ4 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.5□□□□□ -1.85
USP31Q70CQ4 RNU2-63P-201ENST00000410792 194 ntBASIC3.5□□□□□ -1.85
USP31Q70CQ4 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC3.5□□□□□ -1.85
USP31Q70CQ4 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.5□□□□□ -1.85
USP31Q70CQ4 RNU6-948P-201ENST00000516374 107 ntBASIC3.5□□□□□ -1.85
USP31Q70CQ4 AC136628.3-201ENST00000521868 290 ntBASIC3.5□□□□□ -1.85
USP31Q70CQ4 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC3.5□□□□□ -1.85
USP31Q70CQ4 snoZ196.1-201ENST00000625269 89 ntBASIC3.5□□□□□ -1.85
USP31Q70CQ4 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.49□□□□□ -1.85
USP31Q70CQ4 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.49□□□□□ -1.85
USP31Q70CQ4 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
USP31Q70CQ4 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
USP31Q70CQ4 ZNF658B-202ENST00000615961 3375 ntBASIC3.49□□□□□ -1.85
USP31Q70CQ4 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
USP31Q70CQ4 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
USP31Q70CQ4 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
USP31Q70CQ4 Y_RNA.341-201ENST00000365341 102 ntBASIC3.49□□□□□ -1.85
USP31Q70CQ4 RNU6-47P-201ENST00000383866 107 ntBASIC3.49□□□□□ -1.85
USP31Q70CQ4 RNU2-32P-201ENST00000411193 191 ntBASIC3.49□□□□□ -1.85
USP31Q70CQ4 SNORD53-201ENST00000579969 78 ntBASIC3.49□□□□□ -1.85
USP31Q70CQ4 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.49□□□□□ -1.85
USP31Q70CQ4 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.48□□□□□ -1.85
USP31Q70CQ4 Y_RNA.304-201ENST00000365011 112 ntBASIC3.48□□□□□ -1.85
USP31Q70CQ4 RNU6-975P-201ENST00000384296 105 ntBASIC3.48□□□□□ -1.85
USP31Q70CQ4 SNORD14D-201ENST00000384390 87 ntBASIC3.48□□□□□ -1.85
USP31Q70CQ4 AL590004.2-201ENST00000404787 371 ntBASIC3.48□□□□□ -1.85
USP31Q70CQ4 AL357139.1-201ENST00000407792 426 ntBASIC3.48□□□□□ -1.85
USP31Q70CQ4 RNU6-855P-201ENST00000410395 104 ntBASIC3.48□□□□□ -1.85
USP31Q70CQ4 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.48□□□□□ -1.85
USP31Q70CQ4 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.48□□□□□ -1.85
USP31Q70CQ4 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.48□□□□□ -1.85
USP31Q70CQ4 RNY3P16-201ENST00000516338 101 ntBASIC3.48□□□□□ -1.85
USP31Q70CQ4 SNORA50A-202ENST00000629536 136 ntBASIC3.48□□□□□ -1.85
USP31Q70CQ4 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
USP31Q70CQ4 AC016717.2-201ENST00000609089 5141 ntBASIC3.47□□□□□ -1.85
USP31Q70CQ4 Y_RNA.287-201ENST00000364853 94 ntBASIC3.47□□□□□ -1.85
USP31Q70CQ4 RNU6-493P-201ENST00000391321 108 ntBASIC3.47□□□□□ -1.85
USP31Q70CQ4 RNU6-57P-201ENST00000411348 103 ntBASIC3.47□□□□□ -1.85
USP31Q70CQ4 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC3.47□□□□□ -1.85
USP31Q70CQ4 AC009969.1-201ENST00000438726 172 ntBASIC3.47□□□□□ -1.85
USP31Q70CQ4 TRAPPC2P7-201ENST00000509650 231 ntBASIC3.47□□□□□ -1.85
USP31Q70CQ4 ATP5EP1-201ENST00000510257 156 ntBASIC3.47□□□□□ -1.85
USP31Q70CQ4 Y_RNA.662-201ENST00000516028 97 ntBASIC3.47□□□□□ -1.85
USP31Q70CQ4 RNU6-861P-201ENST00000516745 106 ntBASIC3.47□□□□□ -1.85
USP31Q70CQ4 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.47□□□□□ -1.85
USP31Q70CQ4 AC022616.8-201ENST00000533569 253 ntBASIC3.47□□□□□ -1.85
USP31Q70CQ4 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.47□□□□□ -1.85
USP31Q70CQ4 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.47□□□□□ -1.85
USP31Q70CQ4 AL008718.3-201ENST00000610217 321 ntBASIC3.47□□□□□ -1.85
USP31Q70CQ4 U4.3-201ENST00000621047 82 ntBASIC3.47□□□□□ -1.85
USP31Q70CQ4 MIR7843-201ENST00000622274 79 ntBASIC3.47□□□□□ -1.85
USP31Q70CQ4 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
USP31Q70CQ4 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
USP31Q70CQ4 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.47□□□□□ -1.85
USP31Q70CQ4 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
USP31Q70CQ4 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.46□□□□□ -1.86
USP31Q70CQ4 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.46□□□□□ -1.86
USP31Q70CQ4 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
USP31Q70CQ4 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
USP31Q70CQ4 RNU6-763P-201ENST00000390865 106 ntBASIC3.46□□□□□ -1.86
USP31Q70CQ4 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC3.46□□□□□ -1.86
USP31Q70CQ4 HMGN2P18-201ENST00000450680 270 ntBASIC3.46□□□□□ -1.86
USP31Q70CQ4 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.46□□□□□ -1.86
USP31Q70CQ4 MIR4769-201ENST00000584126 77 ntBASIC3.46□□□□□ -1.86
USP31Q70CQ4 AL355297.2-201ENST00000604792 129 ntBASIC3.46□□□□□ -1.86
USP31Q70CQ4 AL078604.3-201ENST00000615580 211 ntBASIC3.46□□□□□ -1.86
USP31Q70CQ4 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
USP31Q70CQ4 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.45□□□□□ -1.86
USP31Q70CQ4 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
USP31Q70CQ4 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
USP31Q70CQ4 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
USP31Q70CQ4 RNU6-801P-201ENST00000364087 105 ntBASIC3.45□□□□□ -1.86
USP31Q70CQ4 RNU6-743P-201ENST00000364151 106 ntBASIC3.45□□□□□ -1.86
USP31Q70CQ4 Y_RNA.233-201ENST00000364407 101 ntBASIC3.45□□□□□ -1.86
USP31Q70CQ4 Y_RNA.456-201ENST00000384232 111 ntBASIC3.45□□□□□ -1.86
USP31Q70CQ4 MTND2P29-201ENST00000438595 412 ntBASIC3.45□□□□□ -1.86
USP31Q70CQ4 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC3.45□□□□□ -1.86
USP31Q70CQ4 Y_RNA.637-201ENST00000459424 114 ntBASIC3.45□□□□□ -1.86
USP31Q70CQ4 RNU6-221P-201ENST00000459541 99 ntBASIC3.45□□□□□ -1.86
USP31Q70CQ4 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC3.45□□□□□ -1.86
USP31Q70CQ4 RNA5SP490-201ENST00000517141 136 ntBASIC3.45□□□□□ -1.86
USP31Q70CQ4 AC022559.1-201ENST00000520905 205 ntBASIC3.45□□□□□ -1.86
USP31Q70CQ4 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
USP31Q70CQ4 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC3.45□□□□□ -1.86
USP31Q70CQ4 MIR5692C2-201ENST00000577959 77 ntBASIC3.45□□□□□ -1.86
USP31Q70CQ4 AC009487.4-201ENST00000624969 3585 ntBASIC3.45□□□□□ -1.86
USP31Q70CQ4 RNU6-271P-201ENST00000363858 105 ntBASIC3.44□□□□□ -1.86
USP31Q70CQ4 Y_RNA.368-201ENST00000365547 113 ntBASIC3.44□□□□□ -1.86
USP31Q70CQ4 RNU6-918P-201ENST00000391219 106 ntBASIC3.44□□□□□ -1.86
USP31Q70CQ4 RNU6ATAC15P-201ENST00000408279 121 ntBASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms