Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 Y_RNA.280-201ENST00000364765 112 ntBASIC3.99□□□□□ -1.77
RNF20Q5VTR2 SNORA62.3-201ENST00000365110 153 ntBASIC3.99□□□□□ -1.77
RNF20Q5VTR2 SNORD18B-201ENST00000365659 72 ntBASIC3.99□□□□□ -1.77
RNF20Q5VTR2 MIR200C-201ENST00000384980 68 ntBASIC3.99□□□□□ -1.77
RNF20Q5VTR2 MIR134-201ENST00000385258 73 ntBASIC3.99□□□□□ -1.77
RNF20Q5VTR2 RPS27P22-201ENST00000478056 241 ntBASIC3.99□□□□□ -1.77
RNF20Q5VTR2 AC025647.1-201ENST00000517879 253 ntBASIC3.99□□□□□ -1.77
RNF20Q5VTR2 AC131055.1-201ENST00000584626 316 ntBASIC3.99□□□□□ -1.77
RNF20Q5VTR2 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
RNF20Q5VTR2 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
RNF20Q5VTR2 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
RNF20Q5VTR2 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.98□□□□□ -1.77
RNF20Q5VTR2 SNORA72-201ENST00000384339 132 ntBASIC3.98□□□□□ -1.77
RNF20Q5VTR2 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.98□□□□□ -1.77
RNF20Q5VTR2 RNU6-948P-201ENST00000516374 107 ntBASIC3.98□□□□□ -1.77
RNF20Q5VTR2 Y_RNA.690-201ENST00000516603 95 ntBASIC3.98□□□□□ -1.77
RNF20Q5VTR2 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.98□□□□□ -1.77
RNF20Q5VTR2 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.98□□□□□ -1.77
RNF20Q5VTR2 AC034105.4-201ENST00000568304 277 ntBASIC3.98□□□□□ -1.77
RNF20Q5VTR2 AL670379.3-201ENST00000605040 251 ntBASIC3.98□□□□□ -1.77
RNF20Q5VTR2 SNORA51-201ENST00000606420 132 ntBASIC3.98□□□□□ -1.77
RNF20Q5VTR2 MIR4679-1-201ENST00000637619 75 ntBASIC3.98□□□□□ -1.77
RNF20Q5VTR2 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.97□□□□□ -1.77
RNF20Q5VTR2 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
RNF20Q5VTR2 RNA5SP295-201ENST00000362655 121 ntBASIC3.97□□□□□ -1.77
RNF20Q5VTR2 RNA5SP383-201ENST00000362934 120 ntBASIC3.97□□□□□ -1.77
RNF20Q5VTR2 RNA5SP50-201ENST00000363731 107 ntBASIC3.97□□□□□ -1.77
RNF20Q5VTR2 RNA5SP267-201ENST00000364893 126 ntBASIC3.97□□□□□ -1.77
RNF20Q5VTR2 SNORD31B-201ENST00000364977 69 ntBASIC3.97□□□□□ -1.77
RNF20Q5VTR2 RNU6-117P-201ENST00000365415 107 ntBASIC3.97□□□□□ -1.77
RNF20Q5VTR2 GOT2P5-201ENST00000433995 546 ntBASIC3.97□□□□□ -1.77
RNF20Q5VTR2 MRPS36P2-201ENST00000512569 299 ntBASIC3.97□□□□□ -1.77
RNF20Q5VTR2 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.97□□□□□ -1.77
RNF20Q5VTR2 MIR3922-201ENST00000585192 84 ntBASIC3.97□□□□□ -1.77
RNF20Q5VTR2 uc_338.1-201ENST00000612113 180 ntBASIC3.97□□□□□ -1.77
RNF20Q5VTR2 uc_338.4-201ENST00000616635 176 ntBASIC3.97□□□□□ -1.77
RNF20Q5VTR2 AL049781.1-201ENST00000623195 3585 ntBASIC3.97□□□□□ -1.77
RNF20Q5VTR2 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.97□□□□□ -1.77
RNF20Q5VTR2 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
RNF20Q5VTR2 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
RNF20Q5VTR2 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
RNF20Q5VTR2 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.96□□□□□ -1.78
RNF20Q5VTR2 Y_RNA.634-201ENST00000364811 113 ntBASIC3.96□□□□□ -1.78
RNF20Q5VTR2 MIR548A3-201ENST00000385297 97 ntBASIC3.96□□□□□ -1.78
RNF20Q5VTR2 AC063976.4-201ENST00000421971 163 ntBASIC3.96□□□□□ -1.78
RNF20Q5VTR2 AC009414.1-201ENST00000427200 443 ntBASIC3.96□□□□□ -1.78
RNF20Q5VTR2 CST9LP2-201ENST00000437612 320 ntBASIC3.96□□□□□ -1.78
RNF20Q5VTR2 AC093663.1-201ENST00000497190 394 ntBASIC3.96□□□□□ -1.78
RNF20Q5VTR2 RNA5SP112-201ENST00000515937 99 ntBASIC3.96□□□□□ -1.78
RNF20Q5VTR2 AL160236.1-201ENST00000556317 195 ntBASIC3.96□□□□□ -1.78
RNF20Q5VTR2 AC073476.4-201ENST00000628409 72 ntBASIC3.96□□□□□ -1.78
RNF20Q5VTR2 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
RNF20Q5VTR2 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.96□□□□□ -1.78
RNF20Q5VTR2 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
RNF20Q5VTR2 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
RNF20Q5VTR2 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
RNF20Q5VTR2 Y_RNA.203-201ENST00000364106 102 ntBASIC3.95□□□□□ -1.78
RNF20Q5VTR2 RNU6-309P-201ENST00000364573 106 ntBASIC3.95□□□□□ -1.78
RNF20Q5VTR2 SNORD116-21-201ENST00000384507 92 ntBASIC3.95□□□□□ -1.78
RNF20Q5VTR2 AC023449.1-201ENST00000454464 154 ntBASIC3.95□□□□□ -1.78
RNF20Q5VTR2 RNU2-60P-201ENST00000517290 128 ntBASIC3.95□□□□□ -1.78
RNF20Q5VTR2 AC068657.1-201ENST00000520807 306 ntBASIC3.95□□□□□ -1.78
RNF20Q5VTR2 MIR4276-201ENST00000584832 70 ntBASIC3.95□□□□□ -1.78
RNF20Q5VTR2 SNORA50A-202ENST00000629536 136 ntBASIC3.95□□□□□ -1.78
RNF20Q5VTR2 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
RNF20Q5VTR2 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
RNF20Q5VTR2 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
RNF20Q5VTR2 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.94□□□□□ -1.78
RNF20Q5VTR2 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
RNF20Q5VTR2 Y_RNA.35-201ENST00000362601 101 ntBASIC3.94□□□□□ -1.78
RNF20Q5VTR2 SNORD58C-201ENST00000365223 64 ntBASIC3.94□□□□□ -1.78
RNF20Q5VTR2 RNU6-438P-201ENST00000365561 103 ntBASIC3.94□□□□□ -1.78
RNF20Q5VTR2 RNA5SP89-201ENST00000410300 108 ntBASIC3.94□□□□□ -1.78
RNF20Q5VTR2 AC016909.1-201ENST00000415916 166 ntBASIC3.94□□□□□ -1.78
RNF20Q5VTR2 SNORD77.4-201ENST00000516158 81 ntBASIC3.94□□□□□ -1.78
RNF20Q5VTR2 SCARNA17.1-201ENST00000516211 143 ntBASIC3.94□□□□□ -1.78
RNF20Q5VTR2 SCARNA17.2-201ENST00000516334 143 ntBASIC3.94□□□□□ -1.78
RNF20Q5VTR2 RNU6-781P-201ENST00000516377 101 ntBASIC3.94□□□□□ -1.78
RNF20Q5VTR2 RNA5SP153-201ENST00000516498 76 ntBASIC3.94□□□□□ -1.78
RNF20Q5VTR2 RNU6-965P-201ENST00000516721 96 ntBASIC3.94□□□□□ -1.78
RNF20Q5VTR2 RNA5SP380-201ENST00000517190 98 ntBASIC3.94□□□□□ -1.78
RNF20Q5VTR2 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.94□□□□□ -1.78
RNF20Q5VTR2 MIR3117-201ENST00000584034 78 ntBASIC3.94□□□□□ -1.78
RNF20Q5VTR2 SCARNA17.4-201ENST00000614296 143 ntBASIC3.94□□□□□ -1.78
RNF20Q5VTR2 AL121890.5-201ENST00000620848 304 ntBASIC3.94□□□□□ -1.78
RNF20Q5VTR2 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
RNF20Q5VTR2 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.94□□□□□ -1.78
RNF20Q5VTR2 Z83843.1-201ENST00000604070 3685 ntBASIC3.93□□□□□ -1.78
RNF20Q5VTR2 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
RNF20Q5VTR2 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
RNF20Q5VTR2 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
RNF20Q5VTR2 RNU6-1164P-201ENST00000364428 107 ntBASIC3.93□□□□□ -1.78
RNF20Q5VTR2 RNU6-1240P-201ENST00000365155 104 ntBASIC3.93□□□□□ -1.78
RNF20Q5VTR2 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.93□□□□□ -1.78
RNF20Q5VTR2 RPL30P4-201ENST00000429309 333 ntBASIC3.93□□□□□ -1.78
RNF20Q5VTR2 RPL39P40-201ENST00000445481 146 ntBASIC3.93□□□□□ -1.78
RNF20Q5VTR2 RPS4XP11-201ENST00000446897 772 ntBASIC3.93□□□□□ -1.78
RNF20Q5VTR2 RNU6-711P-201ENST00000517255 106 ntBASIC3.93□□□□□ -1.78
RNF20Q5VTR2 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.93□□□□□ -1.78
RNF20Q5VTR2 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms