Protein–RNA interactions for Protein: P48443

RXRG, Retinoic acid receptor RXR-gamma, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRGP48443 MIR3122-201ENST00000577243 73 ntBASIC1.84□□□□□ -2.11
RXRGP48443 AC104260.1-201ENST00000616660 539 ntBASIC1.84□□□□□ -2.11
RXRGP48443 RNU4-42P-201ENST00000364738 142 ntBASIC1.83□□□□□ -2.12
RXRGP48443 RNU6-331P-201ENST00000384724 107 ntBASIC1.83□□□□□ -2.12
RXRGP48443 MIR625-201ENST00000385047 85 ntBASIC1.83□□□□□ -2.12
RXRGP48443 MTCYBP4-201ENST00000401524 249 ntBASIC1.83□□□□□ -2.12
RXRGP48443 EIF1P2-201ENST00000428233 350 ntBASIC1.83□□□□□ -2.12
RXRGP48443 AC108667.1-201ENST00000428618 249 ntBASIC1.83□□□□□ -2.12
RXRGP48443 AC098614.3-201ENST00000438957 440 ntBASIC1.83□□□□□ -2.12
RXRGP48443 AC005908.1-201ENST00000468701 347 ntBASIC1.83□□□□□ -2.12
RXRGP48443 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC1.83□□□□□ -2.12
RXRGP48443 AC074133.1-201ENST00000515696 183 ntBASIC1.83□□□□□ -2.12
RXRGP48443 SCARNA16.2-201ENST00000516520 172 ntBASIC1.83□□□□□ -2.12
RXRGP48443 Y_RNA.691-201ENST00000516611 103 ntBASIC1.83□□□□□ -2.12
RXRGP48443 AC022868.1-201ENST00000517767 391 ntBASIC1.83□□□□□ -2.12
RXRGP48443 MIR4255-201ENST00000579351 72 ntBASIC1.83□□□□□ -2.12
RXRGP48443 SNRPGP19-201ENST00000603826 189 ntBASIC1.83□□□□□ -2.12
RXRGP48443 AC025253.1-201ENST00000613623 543 ntBASIC1.83□□□□□ -2.12
RXRGP48443 AC022306.2-201ENST00000617563 647 ntBASIC1.83□□□□□ -2.12
RXRGP48443 AL669831.3-213ENST00000636676 183 ntBASIC1.83□□□□□ -2.12
RXRGP48443 RNU6-1264P-201ENST00000383891 107 ntBASIC1.82□□□□□ -2.12
RXRGP48443 MIR9-3-201ENST00000385084 90 ntBASIC1.82□□□□□ -2.12
RXRGP48443 RNU6-1001P-201ENST00000411265 100 ntBASIC1.82□□□□□ -2.12
RXRGP48443 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.82□□□□□ -2.12
RXRGP48443 SNORA25.15-201ENST00000516487 89 ntBASIC1.82□□□□□ -2.12
RXRGP48443 RNU6-250P-201ENST00000516958 103 ntBASIC1.82□□□□□ -2.12
RXRGP48443 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.82□□□□□ -2.12
RXRGP48443 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.82□□□□□ -2.12
RXRGP48443 RNA5SP190-201ENST00000365222 118 ntBASIC1.81□□□□□ -2.12
RXRGP48443 Y_RNA.498-201ENST00000384460 102 ntBASIC1.81□□□□□ -2.12
RXRGP48443 SNORA17.3-201ENST00000391159 129 ntBASIC1.81□□□□□ -2.12
RXRGP48443 RNU1-78P-201ENST00000391248 165 ntBASIC1.81□□□□□ -2.12
RXRGP48443 RN7SKP200-201ENST00000410564 320 ntBASIC1.81□□□□□ -2.12
RXRGP48443 RNU6-370P-201ENST00000411008 104 ntBASIC1.81□□□□□ -2.12
RXRGP48443 RPL23AP36-201ENST00000413895 458 ntBASIC1.81□□□□□ -2.12
RXRGP48443 AC114482.1-201ENST00000418010 247 ntBASIC1.81□□□□□ -2.12
RXRGP48443 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.81□□□□□ -2.12
RXRGP48443 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.81□□□□□ -2.12
RXRGP48443 MIR2053-201ENST00000459295 91 ntBASIC1.81□□□□□ -2.12
RXRGP48443 RPS27P22-201ENST00000478056 241 ntBASIC1.81□□□□□ -2.12
RXRGP48443 AC079140.2-201ENST00000506193 142 ntBASIC1.81□□□□□ -2.12
RXRGP48443 AC010598.1-201ENST00000510378 103 ntBASIC1.81□□□□□ -2.12
RXRGP48443 RNU7-99P-201ENST00000516271 62 ntBASIC1.81□□□□□ -2.12
RXRGP48443 RNU6-970P-201ENST00000516312 107 ntBASIC1.81□□□□□ -2.12
RXRGP48443 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.81□□□□□ -2.12
RXRGP48443 AC084768.2-201ENST00000622736 221 ntBASIC1.81□□□□□ -2.12
RXRGP48443 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
RXRGP48443 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
RXRGP48443 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.8□□□□□ -2.12
RXRGP48443 SNORA33-201ENST00000363664 130 ntBASIC1.8□□□□□ -2.12
RXRGP48443 Y_RNA.238-201ENST00000364441 102 ntBASIC1.8□□□□□ -2.12
RXRGP48443 Y_RNA.358-201ENST00000365491 99 ntBASIC1.8□□□□□ -2.12
RXRGP48443 Y_RNA.404-201ENST00000383978 102 ntBASIC1.8□□□□□ -2.12
RXRGP48443 Y_RNA.557-201ENST00000384680 107 ntBASIC1.8□□□□□ -2.12
RXRGP48443 AC010154.1-201ENST00000425857 269 ntBASIC1.8□□□□□ -2.12
RXRGP48443 AC003989.2-201ENST00000440224 169 ntBASIC1.8□□□□□ -2.12
RXRGP48443 PCNPP5-201ENST00000452246 481 ntBASIC1.8□□□□□ -2.12
RXRGP48443 RN7SKP49-201ENST00000516675 260 ntBASIC1.8□□□□□ -2.12
RXRGP48443 AP003033.1-201ENST00000527244 415 ntBASIC1.8□□□□□ -2.12
RXRGP48443 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.8□□□□□ -2.12
RXRGP48443 AK6P2-201ENST00000549020 471 ntBASIC1.8□□□□□ -2.12
RXRGP48443 RPL21P9-201ENST00000556149 474 ntBASIC1.8□□□□□ -2.12
RXRGP48443 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC1.8□□□□□ -2.12
RXRGP48443 MIR4438-201ENST00000585271 93 ntBASIC1.8□□□□□ -2.12
RXRGP48443 U6.73-201ENST00000619194 103 ntBASIC1.8□□□□□ -2.12
RXRGP48443 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.8□□□□□ -2.12
RXRGP48443 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.8□□□□□ -2.12
RXRGP48443 WWP1P1-201ENST00000466609 2769 ntBASIC1.79□□□□□ -2.12
RXRGP48443 Y_RNA.4-201ENST00000362333 112 ntBASIC1.79□□□□□ -2.12
RXRGP48443 SNORD81.2-201ENST00000365153 76 ntBASIC1.79□□□□□ -2.12
RXRGP48443 RNU6-1065P-201ENST00000384513 106 ntBASIC1.79□□□□□ -2.12
RXRGP48443 MIR329-1-201ENST00000385028 80 ntBASIC1.79□□□□□ -2.12
RXRGP48443 RNU2-20P-201ENST00000410425 191 ntBASIC1.79□□□□□ -2.12
RXRGP48443 RNA5SP475-201ENST00000410568 110 ntBASIC1.79□□□□□ -2.12
RXRGP48443 AC245517.4-201ENST00000448601 281 ntBASIC1.79□□□□□ -2.12
RXRGP48443 AC108729.3-201ENST00000513484 108 ntBASIC1.79□□□□□ -2.12
RXRGP48443 AC024614.2-201ENST00000577584 372 ntBASIC1.79□□□□□ -2.12
RXRGP48443 SNORA77B-201ENST00000578179 125 ntBASIC1.79□□□□□ -2.12
RXRGP48443 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.79□□□□□ -2.12
RXRGP48443 AC099654.14-201ENST00000638599 341 ntBASIC1.79□□□□□ -2.12
RXRGP48443 AC073544.1-201ENST00000600110 1595 ntBASIC1.79□□□□□ -2.12
RXRGP48443 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.78□□□□□ -2.12
RXRGP48443 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.78□□□□□ -2.12
RXRGP48443 RNA5SP109-201ENST00000391010 116 ntBASIC1.78□□□□□ -2.12
RXRGP48443 SNORA67.5-201ENST00000391036 107 ntBASIC1.78□□□□□ -2.12
RXRGP48443 AL627390.1-201ENST00000396055 340 ntBASIC1.78□□□□□ -2.12
RXRGP48443 RPL21P1-201ENST00000399532 476 ntBASIC1.78□□□□□ -2.12
RXRGP48443 AC245047.3-201ENST00000429428 127 ntBASIC1.78□□□□□ -2.12
RXRGP48443 SNORD65B-201ENST00000459126 73 ntBASIC1.78□□□□□ -2.12
RXRGP48443 RNA5SP445-201ENST00000515889 115 ntBASIC1.78□□□□□ -2.12
RXRGP48443 RNU6-1053P-201ENST00000515930 101 ntBASIC1.78□□□□□ -2.12
RXRGP48443 RNU7-4P-201ENST00000516961 62 ntBASIC1.78□□□□□ -2.12
RXRGP48443 AC027419.1-201ENST00000522976 328 ntBASIC1.78□□□□□ -2.12
RXRGP48443 MIR3937-201ENST00000580135 106 ntBASIC1.78□□□□□ -2.12
RXRGP48443 AC125232.2-201ENST00000592457 143 ntBASIC1.78□□□□□ -2.12
RXRGP48443 AP001485.1-201ENST00000604799 199 ntBASIC1.78□□□□□ -2.12
RXRGP48443 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.78□□□□□ -2.12
RXRGP48443 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.78□□□□□ -2.12
RXRGP48443 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.78□□□□□ -2.13
RXRGP48443 RNU6-271P-201ENST00000363858 105 ntBASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 123.8 ms