Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 AL356292.1-201ENST00000283110 373 ntBASIC3.19□□□□□ -1.9
CCNFP41002 SNORA27.1-201ENST00000362604 124 ntBASIC3.19□□□□□ -1.9
CCNFP41002 RNU6-271P-201ENST00000363858 105 ntBASIC3.19□□□□□ -1.9
CCNFP41002 RNU6-704P-201ENST00000364162 103 ntBASIC3.19□□□□□ -1.9
CCNFP41002 RNU6-275P-201ENST00000364910 107 ntBASIC3.19□□□□□ -1.9
CCNFP41002 MIR181A2-201ENST00000384863 110 ntBASIC3.19□□□□□ -1.9
CCNFP41002 RNU6-578P-201ENST00000390980 103 ntBASIC3.19□□□□□ -1.9
CCNFP41002 RNU2-63P-201ENST00000410792 194 ntBASIC3.19□□□□□ -1.9
CCNFP41002 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.19□□□□□ -1.9
CCNFP41002 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.19□□□□□ -1.9
CCNFP41002 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC3.19□□□□□ -1.9
CCNFP41002 RNA5SP20-201ENST00000515976 84 ntBASIC3.19□□□□□ -1.9
CCNFP41002 RNU6-63P-201ENST00000516690 95 ntBASIC3.19□□□□□ -1.9
CCNFP41002 RNU6-453P-201ENST00000516819 85 ntBASIC3.19□□□□□ -1.9
CCNFP41002 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.19□□□□□ -1.9
CCNFP41002 MIR4724-201ENST00000579485 89 ntBASIC3.19□□□□□ -1.9
CCNFP41002 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC3.19□□□□□ -1.9
CCNFP41002 MIR3117-201ENST00000584034 78 ntBASIC3.19□□□□□ -1.9
CCNFP41002 AP001485.1-201ENST00000604799 199 ntBASIC3.19□□□□□ -1.9
CCNFP41002 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.19□□□□□ -1.9
CCNFP41002 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
CCNFP41002 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.19□□□□□ -1.9
CCNFP41002 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.19□□□□□ -1.9
CCNFP41002 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
CCNFP41002 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.19□□□□□ -1.9
CCNFP41002 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.19□□□□□ -1.9
CCNFP41002 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.19□□□□□ -1.9
CCNFP41002 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
CCNFP41002 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.18□□□□□ -1.9
CCNFP41002 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.18□□□□□ -1.9
CCNFP41002 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CCNFP41002 Y_RNA.111-201ENST00000363248 100 ntBASIC3.18□□□□□ -1.9
CCNFP41002 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CCNFP41002 RNU6-220P-201ENST00000390919 107 ntBASIC3.18□□□□□ -1.9
CCNFP41002 RNU6-383P-201ENST00000410864 94 ntBASIC3.18□□□□□ -1.9
CCNFP41002 CR769767.1-201ENST00000436337 346 ntBASIC3.18□□□□□ -1.9
CCNFP41002 AL137159.1-201ENST00000452808 512 ntBASIC3.18□□□□□ -1.9
CCNFP41002 AC016925.1-201ENST00000458303 298 ntBASIC3.18□□□□□ -1.9
CCNFP41002 RPS26P55-201ENST00000471178 356 ntBASIC3.18□□□□□ -1.9
CCNFP41002 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC3.18□□□□□ -1.9
CCNFP41002 MIR2682-201ENST00000580305 110 ntBASIC3.18□□□□□ -1.9
CCNFP41002 MIR548AY-201ENST00000617669 107 ntBASIC3.18□□□□□ -1.9
CCNFP41002 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.18□□□□□ -1.9
CCNFP41002 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CCNFP41002 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC3.18□□□□□ -1.9
CCNFP41002 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.17□□□□□ -1.9
CCNFP41002 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CCNFP41002 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CCNFP41002 RNU1-23P-201ENST00000363361 144 ntBASIC3.17□□□□□ -1.9
CCNFP41002 RNU6-103P-201ENST00000363686 107 ntBASIC3.17□□□□□ -1.9
CCNFP41002 MIR627-201ENST00000384979 97 ntBASIC3.17□□□□□ -1.9
CCNFP41002 Z92545.1-201ENST00000411782 234 ntBASIC3.17□□□□□ -1.9
CCNFP41002 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.17□□□□□ -1.9
CCNFP41002 AC104332.2-201ENST00000429959 156 ntBASIC3.17□□□□□ -1.9
CCNFP41002 RPS27P22-201ENST00000478056 241 ntBASIC3.17□□□□□ -1.9
CCNFP41002 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.17□□□□□ -1.9
CCNFP41002 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.17□□□□□ -1.9
CCNFP41002 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC3.17□□□□□ -1.9
CCNFP41002 SCARNA8-201ENST00000515924 131 ntBASIC3.17□□□□□ -1.9
CCNFP41002 AC022616.8-201ENST00000533569 253 ntBASIC3.17□□□□□ -1.9
CCNFP41002 MIR3200-201ENST00000580767 85 ntBASIC3.17□□□□□ -1.9
CCNFP41002 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CCNFP41002 uc_338.25-201ENST00000613756 156 ntBASIC3.17□□□□□ -1.9
CCNFP41002 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.17□□□□□ -1.9
CCNFP41002 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
CCNFP41002 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
CCNFP41002 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
CCNFP41002 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC3.16□□□□□ -1.9
CCNFP41002 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CCNFP41002 RNU6-151P-201ENST00000364158 107 ntBASIC3.16□□□□□ -1.9
CCNFP41002 RNU4-84P-201ENST00000364200 139 ntBASIC3.16□□□□□ -1.9
CCNFP41002 RNA5SP267-201ENST00000364893 126 ntBASIC3.16□□□□□ -1.9
CCNFP41002 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CCNFP41002 RNU6-136P-201ENST00000384663 107 ntBASIC3.16□□□□□ -1.9
CCNFP41002 MT-TT-201ENST00000387460 66 ntBASIC3.16□□□□□ -1.9
CCNFP41002 Y_RNA.580-201ENST00000391004 95 ntBASIC3.16□□□□□ -1.9
CCNFP41002 SNORA36B-201ENST00000410438 131 ntBASIC3.16□□□□□ -1.9
CCNFP41002 RN7SKP220-201ENST00000410611 288 ntBASIC3.16□□□□□ -1.9
CCNFP41002 AC006028.1-201ENST00000438379 402 ntBASIC3.16□□□□□ -1.9
CCNFP41002 Z96811.1-201ENST00000445880 108 ntBASIC3.16□□□□□ -1.9
CCNFP41002 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.16□□□□□ -1.9
CCNFP41002 RNU6-991P-201ENST00000516168 107 ntBASIC3.16□□□□□ -1.9
CCNFP41002 RNU7-115P-201ENST00000516433 55 ntBASIC3.16□□□□□ -1.9
CCNFP41002 AC025647.1-201ENST00000517879 253 ntBASIC3.16□□□□□ -1.9
CCNFP41002 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.16□□□□□ -1.9
CCNFP41002 PRELID2P1-201ENST00000552837 301 ntBASIC3.16□□□□□ -1.9
CCNFP41002 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC3.16□□□□□ -1.9
CCNFP41002 POLR3GP1-201ENST00000594073 261 ntBASIC3.16□□□□□ -1.9
CCNFP41002 AL355297.2-201ENST00000604792 129 ntBASIC3.16□□□□□ -1.9
CCNFP41002 AL449363.1-201ENST00000617815 186 ntBASIC3.16□□□□□ -1.9
CCNFP41002 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
CCNFP41002 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
CCNFP41002 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
CCNFP41002 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
CCNFP41002 Y_RNA.343-201ENST00000365354 112 ntBASIC3.15□□□□□ -1.91
CCNFP41002 RNU6-144P-201ENST00000383951 107 ntBASIC3.15□□□□□ -1.91
CCNFP41002 RNU6-1235P-201ENST00000384559 107 ntBASIC3.15□□□□□ -1.91
CCNFP41002 RNU4-47P-201ENST00000410876 114 ntBASIC3.15□□□□□ -1.91
CCNFP41002 EBAG9P1-201ENST00000418955 543 ntBASIC3.15□□□□□ -1.91
CCNFP41002 AC008134.1-201ENST00000420943 193 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms