Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
ACTN4O43707 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
ACTN4O43707 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.18□□□□□ -1.74
ACTN4O43707 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC4.18□□□□□ -1.74
ACTN4O43707 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC4.18□□□□□ -1.74
ACTN4O43707 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
ACTN4O43707 MIR423-201ENST00000362201 94 ntBASIC4.18□□□□□ -1.74
ACTN4O43707 RNU6-944P-201ENST00000364023 107 ntBASIC4.18□□□□□ -1.74
ACTN4O43707 Y_RNA.242-201ENST00000364473 110 ntBASIC4.18□□□□□ -1.74
ACTN4O43707 Y_RNA.298-201ENST00000364960 107 ntBASIC4.18□□□□□ -1.74
ACTN4O43707 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
ACTN4O43707 U8.17-201ENST00000391292 132 ntBASIC4.18□□□□□ -1.74
ACTN4O43707 RN7SL323P-201ENST00000494712 295 ntBASIC4.18□□□□□ -1.74
ACTN4O43707 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.18□□□□□ -1.74
ACTN4O43707 SCARNA23-201ENST00000516060 130 ntBASIC4.18□□□□□ -1.74
ACTN4O43707 RNA5SP164-201ENST00000516533 110 ntBASIC4.18□□□□□ -1.74
ACTN4O43707 RNU6-1231P-201ENST00000517185 103 ntBASIC4.18□□□□□ -1.74
ACTN4O43707 AC008011.1-201ENST00000545989 227 ntBASIC4.18□□□□□ -1.74
ACTN4O43707 AC087499.8-201ENST00000578406 226 ntBASIC4.18□□□□□ -1.74
ACTN4O43707 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
ACTN4O43707 AL162726.3-218ENST00000636401 95 ntBASIC4.18□□□□□ -1.74
ACTN4O43707 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
ACTN4O43707 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
ACTN4O43707 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.17□□□□□ -1.74
ACTN4O43707 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
ACTN4O43707 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
ACTN4O43707 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
ACTN4O43707 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.17□□□□□ -1.74
ACTN4O43707 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
ACTN4O43707 RNY3P2-201ENST00000362918 102 ntBASIC4.17□□□□□ -1.74
ACTN4O43707 RNY1P1-201ENST00000364372 112 ntBASIC4.17□□□□□ -1.74
ACTN4O43707 SNORA2.2-201ENST00000365473 135 ntBASIC4.17□□□□□ -1.74
ACTN4O43707 Y_RNA.466-201ENST00000384294 113 ntBASIC4.17□□□□□ -1.74
ACTN4O43707 RNU6-972P-201ENST00000391208 107 ntBASIC4.17□□□□□ -1.74
ACTN4O43707 HMGN2P31-201ENST00000432430 273 ntBASIC4.17□□□□□ -1.74
ACTN4O43707 AC091390.1-201ENST00000433904 331 ntBASIC4.17□□□□□ -1.74
ACTN4O43707 SNRPGP5-201ENST00000456003 220 ntBASIC4.17□□□□□ -1.74
ACTN4O43707 AC022137.1-201ENST00000483735 151 ntBASIC4.17□□□□□ -1.74
ACTN4O43707 SNORA70.14-201ENST00000516205 110 ntBASIC4.17□□□□□ -1.74
ACTN4O43707 RNU6-65P-201ENST00000516332 98 ntBASIC4.17□□□□□ -1.74
ACTN4O43707 AC022217.4-201ENST00000604389 163 ntBASIC4.17□□□□□ -1.74
ACTN4O43707 IGLL4P-201ENST00000614590 133 ntBASIC4.17□□□□□ -1.74
ACTN4O43707 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
ACTN4O43707 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC4.17□□□□□ -1.74
ACTN4O43707 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
ACTN4O43707 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.16□□□□□ -1.74
ACTN4O43707 RNU6-1274P-201ENST00000384557 107 ntBASIC4.16□□□□□ -1.74
ACTN4O43707 MIR518F-201ENST00000384973 87 ntBASIC4.16□□□□□ -1.74
ACTN4O43707 RN7SKP177-201ENST00000410567 355 ntBASIC4.16□□□□□ -1.74
ACTN4O43707 RHEBP3-201ENST00000411920 351 ntBASIC4.16□□□□□ -1.74
ACTN4O43707 ATP6V0E1P1-201ENST00000412537 226 ntBASIC4.16□□□□□ -1.74
ACTN4O43707 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC4.16□□□□□ -1.74
ACTN4O43707 AC233266.1-201ENST00000454518 96 ntBASIC4.16□□□□□ -1.74
ACTN4O43707 RN7SKP21-201ENST00000516503 220 ntBASIC4.16□□□□□ -1.74
ACTN4O43707 AC004486.1-201ENST00000546846 233 ntBASIC4.16□□□□□ -1.74
ACTN4O43707 AC242852.1-201ENST00000612151 96 ntBASIC4.16□□□□□ -1.74
ACTN4O43707 AC244015.1-201ENST00000622301 99 ntBASIC4.16□□□□□ -1.74
ACTN4O43707 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
ACTN4O43707 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.15□□□□□ -1.74
ACTN4O43707 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC4.15□□□□□ -1.74
ACTN4O43707 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.15□□□□□ -1.74
ACTN4O43707 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
ACTN4O43707 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
ACTN4O43707 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.74
ACTN4O43707 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
ACTN4O43707 Y_RNA.253-201ENST00000364562 112 ntBASIC4.15□□□□□ -1.75
ACTN4O43707 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
ACTN4O43707 MIR1253-201ENST00000408273 105 ntBASIC4.15□□□□□ -1.75
ACTN4O43707 SNORA3.3-201ENST00000408712 125 ntBASIC4.15□□□□□ -1.75
ACTN4O43707 RN7SKP156-201ENST00000410308 342 ntBASIC4.15□□□□□ -1.75
ACTN4O43707 RN7SKP202-201ENST00000410439 330 ntBASIC4.15□□□□□ -1.75
ACTN4O43707 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.15□□□□□ -1.75
ACTN4O43707 AL159169.1-201ENST00000421119 127 ntBASIC4.15□□□□□ -1.75
ACTN4O43707 AL139247.1-201ENST00000422768 325 ntBASIC4.15□□□□□ -1.75
ACTN4O43707 RPL39P39-201ENST00000455840 151 ntBASIC4.15□□□□□ -1.75
ACTN4O43707 HMGN2P16-201ENST00000456802 261 ntBASIC4.15□□□□□ -1.75
ACTN4O43707 RNU7-164P-201ENST00000459221 62 ntBASIC4.15□□□□□ -1.75
ACTN4O43707 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC4.15□□□□□ -1.75
ACTN4O43707 RNU7-70P-201ENST00000516941 66 ntBASIC4.15□□□□□ -1.75
ACTN4O43707 AC103810.1-201ENST00000579873 453 ntBASIC4.15□□□□□ -1.75
ACTN4O43707 MIR3163-201ENST00000581592 73 ntBASIC4.15□□□□□ -1.75
ACTN4O43707 MIR6875-201ENST00000617506 72 ntBASIC4.15□□□□□ -1.75
ACTN4O43707 ZYXP1-201ENST00000617638 118 ntBASIC4.15□□□□□ -1.75
ACTN4O43707 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
ACTN4O43707 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
ACTN4O43707 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
ACTN4O43707 AL049781.1-201ENST00000623195 3585 ntBASIC4.14□□□□□ -1.75
ACTN4O43707 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
ACTN4O43707 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
ACTN4O43707 RNU6-349P-201ENST00000362402 107 ntBASIC4.14□□□□□ -1.75
ACTN4O43707 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
ACTN4O43707 MIR1912-201ENST00000410389 80 ntBASIC4.14□□□□□ -1.75
ACTN4O43707 RPS29P31-201ENST00000446147 164 ntBASIC4.14□□□□□ -1.75
ACTN4O43707 CYCSP30-201ENST00000546447 172 ntBASIC4.14□□□□□ -1.75
ACTN4O43707 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
ACTN4O43707 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.14□□□□□ -1.75
ACTN4O43707 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
ACTN4O43707 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
ACTN4O43707 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
ACTN4O43707 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms