Protein–RNA interactions for Protein: Q9NZU5

LMCD1, LIM and cysteine-rich domains protein 1, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1Q9NZU5 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
LMCD1Q9NZU5 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
LMCD1Q9NZU5 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
LMCD1Q9NZU5 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
LMCD1Q9NZU5 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.53□□□□□ -1.84
LMCD1Q9NZU5 AC073073.2-201ENST00000609827 2578 ntBASIC3.53□□□□□ -1.84
LMCD1Q9NZU5 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.53□□□□□ -1.84
LMCD1Q9NZU5 RNU6-588P-201ENST00000410281 105 ntBASIC3.53□□□□□ -1.84
LMCD1Q9NZU5 BPY2DP-201ENST00000422208 265 ntBASIC3.53□□□□□ -1.84
LMCD1Q9NZU5 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC3.53□□□□□ -1.84
LMCD1Q9NZU5 AL031737.1-201ENST00000450125 223 ntBASIC3.53□□□□□ -1.84
LMCD1Q9NZU5 HSPE1P13-201ENST00000451143 297 ntBASIC3.53□□□□□ -1.84
LMCD1Q9NZU5 RN7SL863P-201ENST00000462370 296 ntBASIC3.53□□□□□ -1.84
LMCD1Q9NZU5 RNU5F-2P-201ENST00000516066 82 ntBASIC3.53□□□□□ -1.84
LMCD1Q9NZU5 RNU1-61P-201ENST00000516107 151 ntBASIC3.53□□□□□ -1.84
LMCD1Q9NZU5 RNU1-117P-201ENST00000517041 158 ntBASIC3.53□□□□□ -1.84
LMCD1Q9NZU5 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.53□□□□□ -1.84
LMCD1Q9NZU5 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.53□□□□□ -1.84
LMCD1Q9NZU5 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.53□□□□□ -1.84
LMCD1Q9NZU5 MIR148B-201ENST00000362252 99 ntBASIC3.52□□□□□ -1.85
LMCD1Q9NZU5 Y_RNA.348-201ENST00000365403 103 ntBASIC3.52□□□□□ -1.85
LMCD1Q9NZU5 SNORA72.4-201ENST00000384174 132 ntBASIC3.52□□□□□ -1.85
LMCD1Q9NZU5 MT-TT-201ENST00000387460 66 ntBASIC3.52□□□□□ -1.85
LMCD1Q9NZU5 AC126124.2-201ENST00000413542 321 ntBASIC3.52□□□□□ -1.85
LMCD1Q9NZU5 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.52□□□□□ -1.85
LMCD1Q9NZU5 AC027124.2-201ENST00000428249 105 ntBASIC3.52□□□□□ -1.85
LMCD1Q9NZU5 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC3.52□□□□□ -1.85
LMCD1Q9NZU5 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.52□□□□□ -1.85
LMCD1Q9NZU5 RPL23AP70-201ENST00000483361 460 ntBASIC3.52□□□□□ -1.85
LMCD1Q9NZU5 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.52□□□□□ -1.85
LMCD1Q9NZU5 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.52□□□□□ -1.85
LMCD1Q9NZU5 AC107294.3-201ENST00000609211 526 ntBASIC3.52□□□□□ -1.85
LMCD1Q9NZU5 MIR1245B-201ENST00000636115 69 ntBASIC3.52□□□□□ -1.85
LMCD1Q9NZU5 MIR3199-2-201ENST00000636243 86 ntBASIC3.52□□□□□ -1.85
LMCD1Q9NZU5 MIR6844-201ENST00000637122 62 ntBASIC3.52□□□□□ -1.85
LMCD1Q9NZU5 AC068647.1-201ENST00000489539 2265 ntBASIC3.52□□□□□ -1.85
LMCD1Q9NZU5 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.52□□□□□ -1.85
LMCD1Q9NZU5 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.52□□□□□ -1.85
LMCD1Q9NZU5 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
LMCD1Q9NZU5 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
LMCD1Q9NZU5 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
LMCD1Q9NZU5 SNORD115-30-201ENST00000364117 82 ntBASIC3.51□□□□□ -1.85
LMCD1Q9NZU5 RNU6-283P-201ENST00000364788 107 ntBASIC3.51□□□□□ -1.85
LMCD1Q9NZU5 RNU6-855P-201ENST00000410395 104 ntBASIC3.51□□□□□ -1.85
LMCD1Q9NZU5 AC004866.1-201ENST00000411748 78 ntBASIC3.51□□□□□ -1.85
LMCD1Q9NZU5 AC006989.1-201ENST00000427212 131 ntBASIC3.51□□□□□ -1.85
LMCD1Q9NZU5 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.51□□□□□ -1.85
LMCD1Q9NZU5 HMGN2P16-201ENST00000456802 261 ntBASIC3.51□□□□□ -1.85
LMCD1Q9NZU5 AC026333.2-201ENST00000542164 106 ntBASIC3.51□□□□□ -1.85
LMCD1Q9NZU5 MIR3136-201ENST00000583498 78 ntBASIC3.51□□□□□ -1.85
LMCD1Q9NZU5 AC025521.1-201ENST00000621624 286 ntBASIC3.51□□□□□ -1.85
LMCD1Q9NZU5 AC012640.5-201ENST00000623897 319 ntBASIC3.51□□□□□ -1.85
LMCD1Q9NZU5 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
LMCD1Q9NZU5 AL596211.1-201ENST00000569873 2277 ntBASIC3.51□□□□□ -1.85
LMCD1Q9NZU5 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
LMCD1Q9NZU5 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.5□□□□□ -1.85
LMCD1Q9NZU5 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.5□□□□□ -1.85
LMCD1Q9NZU5 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
LMCD1Q9NZU5 RNU1-75P-201ENST00000347264 129 ntBASIC3.5□□□□□ -1.85
LMCD1Q9NZU5 RNU6-529P-201ENST00000363383 104 ntBASIC3.5□□□□□ -1.85
LMCD1Q9NZU5 RNA5SP42-201ENST00000364278 115 ntBASIC3.5□□□□□ -1.85
LMCD1Q9NZU5 RNU6-49P-201ENST00000384256 107 ntBASIC3.5□□□□□ -1.85
LMCD1Q9NZU5 Y_RNA.558-201ENST00000384685 113 ntBASIC3.5□□□□□ -1.85
LMCD1Q9NZU5 RNU6-19P-201ENST00000384718 107 ntBASIC3.5□□□□□ -1.85
LMCD1Q9NZU5 AL161651.1-201ENST00000440882 223 ntBASIC3.5□□□□□ -1.85
LMCD1Q9NZU5 AC004386.2-201ENST00000441858 148 ntBASIC3.5□□□□□ -1.85
LMCD1Q9NZU5 RNA5SP310-201ENST00000459084 116 ntBASIC3.5□□□□□ -1.85
LMCD1Q9NZU5 RNU6-561P-201ENST00000516222 102 ntBASIC3.5□□□□□ -1.85
LMCD1Q9NZU5 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.5□□□□□ -1.85
LMCD1Q9NZU5 AC105137.2-201ENST00000569073 466 ntBASIC3.5□□□□□ -1.85
LMCD1Q9NZU5 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
LMCD1Q9NZU5 AC106754.2-201ENST00000623006 233 ntBASIC3.5□□□□□ -1.85
LMCD1Q9NZU5 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.5□□□□□ -1.85
LMCD1Q9NZU5 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
LMCD1Q9NZU5 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
LMCD1Q9NZU5 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.5□□□□□ -1.85
LMCD1Q9NZU5 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
LMCD1Q9NZU5 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
LMCD1Q9NZU5 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
LMCD1Q9NZU5 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
LMCD1Q9NZU5 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.49□□□□□ -1.85
LMCD1Q9NZU5 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.49□□□□□ -1.85
LMCD1Q9NZU5 AC002543.1-201ENST00000299783 1954 ntBASIC3.49□□□□□ -1.85
LMCD1Q9NZU5 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
LMCD1Q9NZU5 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC3.49□□□□□ -1.85
LMCD1Q9NZU5 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
LMCD1Q9NZU5 Y_RNA.341-201ENST00000365341 102 ntBASIC3.49□□□□□ -1.85
LMCD1Q9NZU5 RNU6-487P-201ENST00000365430 104 ntBASIC3.49□□□□□ -1.85
LMCD1Q9NZU5 Y_RNA.393-201ENST00000383936 102 ntBASIC3.49□□□□□ -1.85
LMCD1Q9NZU5 MIR15B-201ENST00000385045 98 ntBASIC3.49□□□□□ -1.85
LMCD1Q9NZU5 MIR616-201ENST00000385293 97 ntBASIC3.49□□□□□ -1.85
LMCD1Q9NZU5 RN7SKP123-201ENST00000410732 291 ntBASIC3.49□□□□□ -1.85
LMCD1Q9NZU5 RPS4XP2-201ENST00000458402 793 ntBASIC3.49□□□□□ -1.85
LMCD1Q9NZU5 RNA5SP356-201ENST00000515972 94 ntBASIC3.49□□□□□ -1.85
LMCD1Q9NZU5 RNU6-65P-201ENST00000516332 98 ntBASIC3.49□□□□□ -1.85
LMCD1Q9NZU5 RNU2-60P-201ENST00000517290 128 ntBASIC3.49□□□□□ -1.85
LMCD1Q9NZU5 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3.49□□□□□ -1.85
LMCD1Q9NZU5 MIR4506-201ENST00000584693 77 ntBASIC3.49□□□□□ -1.85
LMCD1Q9NZU5 HMGN2P15-201ENST00000585707 270 ntBASIC3.49□□□□□ -1.85
LMCD1Q9NZU5 AC062037.1-201ENST00000605302 128 ntBASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 151.5 ms