Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 AC110741.2-201ENST00000605278 268 ntBASIC3.67□□□□□ -1.82
NEUROD4Q9HD90 AC006435.5-201ENST00000624486 112 ntBASIC3.67□□□□□ -1.82
NEUROD4Q9HD90 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
NEUROD4Q9HD90 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
NEUROD4Q9HD90 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.67□□□□□ -1.82
NEUROD4Q9HD90 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
NEUROD4Q9HD90 RNU1-22P-201ENST00000363334 158 ntBASIC3.66□□□□□ -1.82
NEUROD4Q9HD90 RNU6-647P-201ENST00000364243 107 ntBASIC3.66□□□□□ -1.82
NEUROD4Q9HD90 SNORD18B-201ENST00000365659 72 ntBASIC3.66□□□□□ -1.82
NEUROD4Q9HD90 MIR7-3-201ENST00000384898 110 ntBASIC3.66□□□□□ -1.82
NEUROD4Q9HD90 MIR449B-201ENST00000384995 97 ntBASIC3.66□□□□□ -1.82
NEUROD4Q9HD90 MIR5582-201ENST00000579697 68 ntBASIC3.66□□□□□ -1.82
NEUROD4Q9HD90 AL121890.5-201ENST00000620848 304 ntBASIC3.66□□□□□ -1.82
NEUROD4Q9HD90 MIR1248-201ENST00000629190 106 ntBASIC3.66□□□□□ -1.82
NEUROD4Q9HD90 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
NEUROD4Q9HD90 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
NEUROD4Q9HD90 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
NEUROD4Q9HD90 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
NEUROD4Q9HD90 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
NEUROD4Q9HD90 MIR450A1-201ENST00000362262 91 ntBASIC3.65□□□□□ -1.83
NEUROD4Q9HD90 RNA5SP97-201ENST00000365006 84 ntBASIC3.65□□□□□ -1.83
NEUROD4Q9HD90 RNU6-1240P-201ENST00000365155 104 ntBASIC3.65□□□□□ -1.83
NEUROD4Q9HD90 RNU6-1235P-201ENST00000384559 107 ntBASIC3.65□□□□□ -1.83
NEUROD4Q9HD90 MIR562-201ENST00000384894 95 ntBASIC3.65□□□□□ -1.83
NEUROD4Q9HD90 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC3.65□□□□□ -1.83
NEUROD4Q9HD90 Y_RNA.649-201ENST00000459077 103 ntBASIC3.65□□□□□ -1.83
NEUROD4Q9HD90 RNU6-498P-201ENST00000459468 107 ntBASIC3.65□□□□□ -1.83
NEUROD4Q9HD90 RPS29P12-201ENST00000460178 152 ntBASIC3.65□□□□□ -1.83
NEUROD4Q9HD90 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.65□□□□□ -1.83
NEUROD4Q9HD90 RNU7-149P-201ENST00000516739 59 ntBASIC3.65□□□□□ -1.83
NEUROD4Q9HD90 AC007751.1-201ENST00000529260 376 ntBASIC3.65□□□□□ -1.83
NEUROD4Q9HD90 AC105245.1-201ENST00000581934 244 ntBASIC3.65□□□□□ -1.83
NEUROD4Q9HD90 AC006254.2-201ENST00000603259 279 ntBASIC3.65□□□□□ -1.83
NEUROD4Q9HD90 AL022345.2-201ENST00000606307 135 ntBASIC3.65□□□□□ -1.83
NEUROD4Q9HD90 AC090115.4-201ENST00000609970 188 ntBASIC3.65□□□□□ -1.83
NEUROD4Q9HD90 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.65□□□□□ -1.83
NEUROD4Q9HD90 Pinc.1-201ENST00000616452 154 ntBASIC3.65□□□□□ -1.83
NEUROD4Q9HD90 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
NEUROD4Q9HD90 MIR7515-201ENST00000637837 67 ntBASIC3.65□□□□□ -1.83
NEUROD4Q9HD90 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
NEUROD4Q9HD90 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.64□□□□□ -1.83
NEUROD4Q9HD90 Y_RNA.66-201ENST00000362862 102 ntBASIC3.64□□□□□ -1.83
NEUROD4Q9HD90 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.64□□□□□ -1.83
NEUROD4Q9HD90 MIR891A-201ENST00000401237 79 ntBASIC3.64□□□□□ -1.83
NEUROD4Q9HD90 AL159169.1-201ENST00000421119 127 ntBASIC3.64□□□□□ -1.83
NEUROD4Q9HD90 AC063976.3-201ENST00000426849 329 ntBASIC3.64□□□□□ -1.83
NEUROD4Q9HD90 AL133547.1-201ENST00000448546 220 ntBASIC3.64□□□□□ -1.83
NEUROD4Q9HD90 HMGN2P18-201ENST00000450680 270 ntBASIC3.64□□□□□ -1.83
NEUROD4Q9HD90 RNA5SP164-201ENST00000516533 110 ntBASIC3.64□□□□□ -1.83
NEUROD4Q9HD90 RN7SKP209-201ENST00000516888 304 ntBASIC3.64□□□□□ -1.83
NEUROD4Q9HD90 AC107934.2-201ENST00000518653 310 ntBASIC3.64□□□□□ -1.83
NEUROD4Q9HD90 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.64□□□□□ -1.83
NEUROD4Q9HD90 RN7SL703P-201ENST00000578485 302 ntBASIC3.64□□□□□ -1.83
NEUROD4Q9HD90 MIR5685-201ENST00000579080 79 ntBASIC3.64□□□□□ -1.83
NEUROD4Q9HD90 AC020914.4-201ENST00000597690 277 ntBASIC3.64□□□□□ -1.83
NEUROD4Q9HD90 AL137849.1-201ENST00000604767 169 ntBASIC3.64□□□□□ -1.83
NEUROD4Q9HD90 MIR7157-201ENST00000635801 60 ntBASIC3.64□□□□□ -1.83
NEUROD4Q9HD90 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
NEUROD4Q9HD90 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
NEUROD4Q9HD90 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
NEUROD4Q9HD90 AL161912.2-201ENST00000565707 3007 ntBASIC3.63□□□□□ -1.83
NEUROD4Q9HD90 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.63□□□□□ -1.83
NEUROD4Q9HD90 Y_RNA.111-201ENST00000363248 100 ntBASIC3.63□□□□□ -1.83
NEUROD4Q9HD90 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
NEUROD4Q9HD90 ARF4P2-201ENST00000430209 526 ntBASIC3.63□□□□□ -1.83
NEUROD4Q9HD90 GOT2P5-201ENST00000433995 546 ntBASIC3.63□□□□□ -1.83
NEUROD4Q9HD90 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.63□□□□□ -1.83
NEUROD4Q9HD90 AC097462.1-201ENST00000514125 324 ntBASIC3.63□□□□□ -1.83
NEUROD4Q9HD90 RNU6-965P-201ENST00000516721 96 ntBASIC3.63□□□□□ -1.83
NEUROD4Q9HD90 AC011604.1-201ENST00000545978 196 ntBASIC3.63□□□□□ -1.83
NEUROD4Q9HD90 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.63□□□□□ -1.83
NEUROD4Q9HD90 MIR2681-201ENST00000581814 105 ntBASIC3.63□□□□□ -1.83
NEUROD4Q9HD90 AC025166.1-201ENST00000612411 163 ntBASIC3.63□□□□□ -1.83
NEUROD4Q9HD90 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.63□□□□□ -1.83
NEUROD4Q9HD90 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC3.63□□□□□ -1.83
NEUROD4Q9HD90 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
NEUROD4Q9HD90 AC006504.1-201ENST00000562493 3666 ntBASIC3.63□□□□□ -1.83
NEUROD4Q9HD90 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
NEUROD4Q9HD90 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.63□□□□□ -1.83
NEUROD4Q9HD90 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.63□□□□□ -1.83
NEUROD4Q9HD90 MTND5P18-201ENST00000445624 1801 ntBASIC3.63□□□□□ -1.83
NEUROD4Q9HD90 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.62□□□□□ -1.83
NEUROD4Q9HD90 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.62□□□□□ -1.83
NEUROD4Q9HD90 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
NEUROD4Q9HD90 MIR208A-201ENST00000362287 71 ntBASIC3.62□□□□□ -1.83
NEUROD4Q9HD90 SNORA71.3-201ENST00000362582 128 ntBASIC3.62□□□□□ -1.83
NEUROD4Q9HD90 RNU1-18P-201ENST00000363062 164 ntBASIC3.62□□□□□ -1.83
NEUROD4Q9HD90 RNU6-1138P-201ENST00000365359 106 ntBASIC3.62□□□□□ -1.83
NEUROD4Q9HD90 Y_RNA.495-201ENST00000384435 112 ntBASIC3.62□□□□□ -1.83
NEUROD4Q9HD90 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
NEUROD4Q9HD90 RNU6-1328P-201ENST00000410938 106 ntBASIC3.62□□□□□ -1.83
NEUROD4Q9HD90 MTCO1P44-201ENST00000441935 243 ntBASIC3.62□□□□□ -1.83
NEUROD4Q9HD90 RNU7-170P-201ENST00000459303 61 ntBASIC3.62□□□□□ -1.83
NEUROD4Q9HD90 RN7SL93P-201ENST00000463035 293 ntBASIC3.62□□□□□ -1.83
NEUROD4Q9HD90 RAC1P2-201ENST00000511164 579 ntBASIC3.62□□□□□ -1.83
NEUROD4Q9HD90 SCARNA3-201ENST00000517097 143 ntBASIC3.62□□□□□ -1.83
NEUROD4Q9HD90 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.62□□□□□ -1.83
NEUROD4Q9HD90 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.62□□□□□ -1.83
NEUROD4Q9HD90 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.62□□□□□ -1.83
NEUROD4Q9HD90 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms