Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC2.93□□□□□ -1.94
KRTAP3-3Q9BYR6 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC2.93□□□□□ -1.94
KRTAP3-3Q9BYR6 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
KRTAP3-3Q9BYR6 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
KRTAP3-3Q9BYR6 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
KRTAP3-3Q9BYR6 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC2.92□□□□□ -1.94
KRTAP3-3Q9BYR6 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
KRTAP3-3Q9BYR6 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
KRTAP3-3Q9BYR6 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC2.92□□□□□ -1.94
KRTAP3-3Q9BYR6 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
KRTAP3-3Q9BYR6 TSC1-201ENST00000298552 8604 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
KRTAP3-3Q9BYR6 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC2.92□□□□□ -1.94
KRTAP3-3Q9BYR6 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
KRTAP3-3Q9BYR6 AL022323.4-201ENST00000623980 13120 ntBASIC2.92□□□□□ -1.94
KRTAP3-3Q9BYR6 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
KRTAP3-3Q9BYR6 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
KRTAP3-3Q9BYR6 RNU6-990P-201ENST00000364385 104 ntBASIC2.92□□□□□ -1.94
KRTAP3-3Q9BYR6 KRTAP2-5P-201ENST00000446109 396 ntBASIC2.92□□□□□ -1.94
KRTAP3-3Q9BYR6 SNORD42B-201ENST00000458893 67 ntBASIC2.92□□□□□ -1.94
KRTAP3-3Q9BYR6 RNU7-74P-201ENST00000459104 62 ntBASIC2.92□□□□□ -1.94
KRTAP3-3Q9BYR6 RN7SL274P-201ENST00000492268 272 ntBASIC2.92□□□□□ -1.94
KRTAP3-3Q9BYR6 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC2.92□□□□□ -1.94
KRTAP3-3Q9BYR6 AC138207.3-201ENST00000585289 166 ntBASIC2.92□□□□□ -1.94
KRTAP3-3Q9BYR6 SNRPGP19-201ENST00000603826 189 ntBASIC2.92□□□□□ -1.94
KRTAP3-3Q9BYR6 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC2.92□□□□□ -1.94
KRTAP3-3Q9BYR6 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC2.92□□□□□ -1.94
KRTAP3-3Q9BYR6 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
KRTAP3-3Q9BYR6 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
KRTAP3-3Q9BYR6 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC2.92□□□□□ -1.94
KRTAP3-3Q9BYR6 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC2.92□□□□□ -1.94
KRTAP3-3Q9BYR6 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.91□□□□□ -1.94
KRTAP3-3Q9BYR6 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
KRTAP3-3Q9BYR6 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC2.91□□□□□ -1.94
KRTAP3-3Q9BYR6 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC2.91□□□□□ -1.94
KRTAP3-3Q9BYR6 IDE-202ENST00000371581 4480 ntTSL 2 BASIC2.91□□□□□ -1.94
KRTAP3-3Q9BYR6 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC2.91□□□□□ -1.94
KRTAP3-3Q9BYR6 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.91□□□□□ -1.94
KRTAP3-3Q9BYR6 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
KRTAP3-3Q9BYR6 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
KRTAP3-3Q9BYR6 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC2.91□□□□□ -1.94
KRTAP3-3Q9BYR6 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC2.91□□□□□ -1.94
KRTAP3-3Q9BYR6 RNU6-1123P-201ENST00000362347 106 ntBASIC2.91□□□□□ -1.94
KRTAP3-3Q9BYR6 RNU1-83P-201ENST00000363426 164 ntBASIC2.91□□□□□ -1.94
KRTAP3-3Q9BYR6 RNU6-810P-201ENST00000364001 107 ntBASIC2.91□□□□□ -1.94
KRTAP3-3Q9BYR6 Y_RNA.246-201ENST00000364495 108 ntBASIC2.91□□□□□ -1.94
KRTAP3-3Q9BYR6 RNA5SP211-201ENST00000365516 117 ntBASIC2.91□□□□□ -1.94
KRTAP3-3Q9BYR6 RNU6-1126P-201ENST00000384002 107 ntBASIC2.91□□□□□ -1.94
KRTAP3-3Q9BYR6 MIR27A-201ENST00000385073 78 ntBASIC2.91□□□□□ -1.94
KRTAP3-3Q9BYR6 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
KRTAP3-3Q9BYR6 CRIP1P1-201ENST00000427567 185 ntBASIC2.91□□□□□ -1.94
KRTAP3-3Q9BYR6 RPS10P14-201ENST00000440748 502 ntBASIC2.91□□□□□ -1.94
KRTAP3-3Q9BYR6 RNU7-26P-201ENST00000458980 63 ntBASIC2.91□□□□□ -1.94
KRTAP3-3Q9BYR6 RN7SL39P-201ENST00000462264 297 ntBASIC2.91□□□□□ -1.94
KRTAP3-3Q9BYR6 RN7SL170P-201ENST00000487098 295 ntBASIC2.91□□□□□ -1.94
KRTAP3-3Q9BYR6 AC091912.1-201ENST00000511351 248 ntBASIC2.91□□□□□ -1.94
KRTAP3-3Q9BYR6 SNORA31.11-201ENST00000516528 139 ntBASIC2.91□□□□□ -1.94
KRTAP3-3Q9BYR6 MIR4502-201ENST00000580432 81 ntBASIC2.91□□□□□ -1.94
KRTAP3-3Q9BYR6 5S_rRNA.15-201ENST00000611169 127 ntBASIC2.91□□□□□ -1.94
KRTAP3-3Q9BYR6 AC068213.1-201ENST00000625124 226 ntBASIC2.91□□□□□ -1.94
KRTAP3-3Q9BYR6 AL049767.1-202ENST00000637826 242 ntBASIC2.91□□□□□ -1.94
KRTAP3-3Q9BYR6 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
KRTAP3-3Q9BYR6 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC2.91□□□□□ -1.94
KRTAP3-3Q9BYR6 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
KRTAP3-3Q9BYR6 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC2.91□□□□□ -1.94
KRTAP3-3Q9BYR6 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC2.91□□□□□ -1.94
KRTAP3-3Q9BYR6 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
KRTAP3-3Q9BYR6 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC2.91□□□□□ -1.94
KRTAP3-3Q9BYR6 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC2.91□□□□□ -1.94
KRTAP3-3Q9BYR6 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC2.91□□□□□ -1.94
KRTAP3-3Q9BYR6 MAPK10-322ENST00000641485 4530 ntBASIC2.91□□□□□ -1.94
KRTAP3-3Q9BYR6 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
KRTAP3-3Q9BYR6 ANKRD31-201ENST00000274361 6036 ntAPPRIS P2 TSL 5 BASIC2.9□□□□□ -1.94
KRTAP3-3Q9BYR6 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
KRTAP3-3Q9BYR6 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC2.9□□□□□ -1.94
KRTAP3-3Q9BYR6 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
KRTAP3-3Q9BYR6 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
KRTAP3-3Q9BYR6 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
KRTAP3-3Q9BYR6 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
KRTAP3-3Q9BYR6 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
KRTAP3-3Q9BYR6 RNA5SP110-201ENST00000362638 115 ntBASIC2.9□□□□□ -1.95
KRTAP3-3Q9BYR6 RNA5SP77-201ENST00000365394 120 ntBASIC2.9□□□□□ -1.95
KRTAP3-3Q9BYR6 RNU1-138P-201ENST00000384093 164 ntBASIC2.9□□□□□ -1.95
KRTAP3-3Q9BYR6 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC2.9□□□□□ -1.95
KRTAP3-3Q9BYR6 AC114324.2-202ENST00000503812 134 ntBASIC2.9□□□□□ -1.95
KRTAP3-3Q9BYR6 MIR2117-201ENST00000516780 80 ntBASIC2.9□□□□□ -1.95
KRTAP3-3Q9BYR6 MIR4732-201ENST00000581873 76 ntBASIC2.9□□□□□ -1.95
KRTAP3-3Q9BYR6 SMIM12P1-201ENST00000603004 274 ntBASIC2.9□□□□□ -1.95
KRTAP3-3Q9BYR6 MIR6829-201ENST00000620375 67 ntBASIC2.9□□□□□ -1.95
KRTAP3-3Q9BYR6 MIR6811-201ENST00000620409 58 ntBASIC2.9□□□□□ -1.95
KRTAP3-3Q9BYR6 MIR6503-201ENST00000622884 86 ntBASIC2.9□□□□□ -1.95
KRTAP3-3Q9BYR6 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC2.9□□□□□ -1.95
KRTAP3-3Q9BYR6 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC2.9□□□□□ -1.95
KRTAP3-3Q9BYR6 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
KRTAP3-3Q9BYR6 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC2.9□□□□□ -1.95
KRTAP3-3Q9BYR6 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC2.9□□□□□ -1.95
KRTAP3-3Q9BYR6 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
KRTAP3-3Q9BYR6 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC2.9□□□□□ -1.95
KRTAP3-3Q9BYR6 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC2.9□□□□□ -1.95
KRTAP3-3Q9BYR6 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
KRTAP3-3Q9BYR6 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms