Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 PTMAP3-201ENST00000447474 330 ntBASIC1.34□□□□□ -2.19
KRTAP4-3Q9BYR4 RBMY2UP-201ENST00000453474 324 ntBASIC1.34□□□□□ -2.19
KRTAP4-3Q9BYR4 snoU13.22-201ENST00000459428 104 ntBASIC1.34□□□□□ -2.19
KRTAP4-3Q9BYR4 AC080013.2-201ENST00000460866 323 ntBASIC1.34□□□□□ -2.19
KRTAP4-3Q9BYR4 SNRPGP7-201ENST00000469016 106 ntBASIC1.34□□□□□ -2.19
KRTAP4-3Q9BYR4 AC012158.1-204ENST00000483430 465 ntBASIC1.34□□□□□ -2.19
KRTAP4-3Q9BYR4 RPL29P14-201ENST00000495837 428 ntBASIC1.34□□□□□ -2.19
KRTAP4-3Q9BYR4 AC026726.1-201ENST00000512859 601 ntBASIC1.34□□□□□ -2.19
KRTAP4-3Q9BYR4 RNU7-2P-201ENST00000516096 62 ntBASIC1.34□□□□□ -2.19
KRTAP4-3Q9BYR4 SNORA43.2-201ENST00000516652 128 ntBASIC1.34□□□□□ -2.19
KRTAP4-3Q9BYR4 RNU6-63P-201ENST00000516690 95 ntBASIC1.34□□□□□ -2.19
KRTAP4-3Q9BYR4 SNORD36C-201ENST00000516733 66 ntBASIC1.34□□□□□ -2.19
KRTAP4-3Q9BYR4 RNU1-117P-201ENST00000517041 158 ntBASIC1.34□□□□□ -2.19
KRTAP4-3Q9BYR4 AC007536.1-201ENST00000533382 349 ntBASIC1.34□□□□□ -2.19
KRTAP4-3Q9BYR4 MIR548X-201ENST00000580069 75 ntBASIC1.34□□□□□ -2.19
KRTAP4-3Q9BYR4 MIR548AE2-201ENST00000583456 67 ntBASIC1.34□□□□□ -2.19
KRTAP4-3Q9BYR4 MIR3936-201ENST00000584304 110 ntBASIC1.34□□□□□ -2.19
KRTAP4-3Q9BYR4 AC104996.3-201ENST00000590718 94 ntBASIC1.34□□□□□ -2.19
KRTAP4-3Q9BYR4 RNU6-92P-201ENST00000605893 104 ntBASIC1.34□□□□□ -2.19
KRTAP4-3Q9BYR4 AC069200.1-201ENST00000609511 323 ntBASIC1.34□□□□□ -2.19
KRTAP4-3Q9BYR4 AL359198.2-201ENST00000611836 194 ntBASIC1.34□□□□□ -2.19
KRTAP4-3Q9BYR4 JPX_2.1-201ENST00000614161 69 ntBASIC1.34□□□□□ -2.19
KRTAP4-3Q9BYR4 MIR6130-201ENST00000619419 109 ntBASIC1.34□□□□□ -2.19
KRTAP4-3Q9BYR4 DLEU2_6.2-201ENST00000620994 136 ntBASIC1.34□□□□□ -2.19
KRTAP4-3Q9BYR4 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC1.34□□□□□ -2.2
KRTAP4-3Q9BYR4 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC1.34□□□□□ -2.2
KRTAP4-3Q9BYR4 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.2
KRTAP4-3Q9BYR4 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC1.34□□□□□ -2.2
KRTAP4-3Q9BYR4 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC1.34□□□□□ -2.2
KRTAP4-3Q9BYR4 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC1.34□□□□□ -2.2
KRTAP4-3Q9BYR4 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.2
KRTAP4-3Q9BYR4 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.2
KRTAP4-3Q9BYR4 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.34□□□□□ -2.2
KRTAP4-3Q9BYR4 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC1.34□□□□□ -2.2
KRTAP4-3Q9BYR4 MAPK10-253ENST00000641010 4072 ntBASIC1.34□□□□□ -2.2
KRTAP4-3Q9BYR4 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.2
KRTAP4-3Q9BYR4 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.2
KRTAP4-3Q9BYR4 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC1.34□□□□□ -2.2
KRTAP4-3Q9BYR4 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.2
KRTAP4-3Q9BYR4 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC1.34□□□□□ -2.2
KRTAP4-3Q9BYR4 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC1.34□□□□□ -2.2
KRTAP4-3Q9BYR4 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC1.33□□□□□ -2.2
KRTAP4-3Q9BYR4 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC1.33□□□□□ -2.2
KRTAP4-3Q9BYR4 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
KRTAP4-3Q9BYR4 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC1.33□□□□□ -2.2
KRTAP4-3Q9BYR4 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC1.33□□□□□ -2.2
KRTAP4-3Q9BYR4 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC1.33□□□□□ -2.2
KRTAP4-3Q9BYR4 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC1.33□□□□□ -2.2
KRTAP4-3Q9BYR4 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
KRTAP4-3Q9BYR4 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
KRTAP4-3Q9BYR4 AL592182.3-201ENST00000642132 3304 ntBASIC1.33□□□□□ -2.2
KRTAP4-3Q9BYR4 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
KRTAP4-3Q9BYR4 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC1.33□□□□□ -2.2
KRTAP4-3Q9BYR4 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC1.33□□□□□ -2.2
KRTAP4-3Q9BYR4 AC106871.1-201ENST00000568324 3102 ntBASIC1.33□□□□□ -2.2
KRTAP4-3Q9BYR4 RNU6-862P-201ENST00000362804 105 ntBASIC1.33□□□□□ -2.2
KRTAP4-3Q9BYR4 SNORD115-2-201ENST00000362842 82 ntBASIC1.33□□□□□ -2.2
KRTAP4-3Q9BYR4 Y_RNA.171-201ENST00000363760 102 ntBASIC1.33□□□□□ -2.2
KRTAP4-3Q9BYR4 Y_RNA.241-201ENST00000364470 117 ntBASIC1.33□□□□□ -2.2
KRTAP4-3Q9BYR4 Y_RNA.333-201ENST00000365274 102 ntBASIC1.33□□□□□ -2.2
KRTAP4-3Q9BYR4 Y_RNA.351-201ENST00000365436 96 ntBASIC1.33□□□□□ -2.2
KRTAP4-3Q9BYR4 Y_RNA.371-201ENST00000365591 113 ntBASIC1.33□□□□□ -2.2
KRTAP4-3Q9BYR4 SNORD51-201ENST00000384320 80 ntBASIC1.33□□□□□ -2.2
KRTAP4-3Q9BYR4 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC1.33□□□□□ -2.2
KRTAP4-3Q9BYR4 RNA5SP511-201ENST00000410487 115 ntBASIC1.33□□□□□ -2.2
KRTAP4-3Q9BYR4 DBIP2-201ENST00000419076 262 ntBASIC1.33□□□□□ -2.2
KRTAP4-3Q9BYR4 AC022022.1-201ENST00000430304 178 ntBASIC1.33□□□□□ -2.2
KRTAP4-3Q9BYR4 RNU7-113P-201ENST00000459273 62 ntBASIC1.33□□□□□ -2.2
KRTAP4-3Q9BYR4 RNU7-80P-201ENST00000459562 61 ntBASIC1.33□□□□□ -2.2
KRTAP4-3Q9BYR4 AC104619.4-201ENST00000510773 249 ntBASIC1.33□□□□□ -2.2
KRTAP4-3Q9BYR4 RNU6-927P-201ENST00000516199 100 ntBASIC1.33□□□□□ -2.2
KRTAP4-3Q9BYR4 RNU6-982P-201ENST00000516216 102 ntBASIC1.33□□□□□ -2.2
KRTAP4-3Q9BYR4 RNU6-1041P-201ENST00000516254 102 ntBASIC1.33□□□□□ -2.2
KRTAP4-3Q9BYR4 SNORA70.18-201ENST00000516696 98 ntBASIC1.33□□□□□ -2.2
KRTAP4-3Q9BYR4 SNORA31.19-201ENST00000517079 126 ntBASIC1.33□□□□□ -2.2
KRTAP4-3Q9BYR4 RNU6-1073P-201ENST00000517182 106 ntBASIC1.33□□□□□ -2.2
KRTAP4-3Q9BYR4 RNU6-902P-201ENST00000517212 91 ntBASIC1.33□□□□□ -2.2
KRTAP4-3Q9BYR4 AC107934.2-201ENST00000518653 310 ntBASIC1.33□□□□□ -2.2
KRTAP4-3Q9BYR4 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.33□□□□□ -2.2
KRTAP4-3Q9BYR4 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC1.33□□□□□ -2.2
KRTAP4-3Q9BYR4 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC1.33□□□□□ -2.2
KRTAP4-3Q9BYR4 MIR3064-201ENST00000581130 66 ntBASIC1.33□□□□□ -2.2
KRTAP4-3Q9BYR4 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
KRTAP4-3Q9BYR4 AC002984.1-201ENST00000591692 448 ntBASIC1.33□□□□□ -2.2
KRTAP4-3Q9BYR4 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.33□□□□□ -2.2
KRTAP4-3Q9BYR4 AC013412.1-201ENST00000610687 192 ntBASIC1.33□□□□□ -2.2
KRTAP4-3Q9BYR4 AL096861.1-201ENST00000610899 123 ntBASIC1.33□□□□□ -2.2
KRTAP4-3Q9BYR4 AC012676.2-201ENST00000619258 186 ntBASIC1.33□□□□□ -2.2
KRTAP4-3Q9BYR4 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC1.33□□□□□ -2.2
KRTAP4-3Q9BYR4 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC1.33□□□□□ -2.2
KRTAP4-3Q9BYR4 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC1.33□□□□□ -2.2
KRTAP4-3Q9BYR4 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC1.33□□□□□ -2.2
KRTAP4-3Q9BYR4 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC1.33□□□□□ -2.2
KRTAP4-3Q9BYR4 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
KRTAP4-3Q9BYR4 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC1.33□□□□□ -2.2
KRTAP4-3Q9BYR4 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC1.33□□□□□ -2.2
KRTAP4-3Q9BYR4 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC1.33□□□□□ -2.2
KRTAP4-3Q9BYR4 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC1.33□□□□□ -2.2
KRTAP4-3Q9BYR4 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
KRTAP4-3Q9BYR4 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms