Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 IGKV3-31-201ENST00000523109 329 ntBASIC3.75□□□□□ -1.81
COL13A1Q5TAT6 AP001328.1-201ENST00000528550 176 ntBASIC3.75□□□□□ -1.81
COL13A1Q5TAT6 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC3.75□□□□□ -1.81
COL13A1Q5TAT6 U7.2-201ENST00000607576 63 ntBASIC3.75□□□□□ -1.81
COL13A1Q5TAT6 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.74□□□□□ -1.81
COL13A1Q5TAT6 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
COL13A1Q5TAT6 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
COL13A1Q5TAT6 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
COL13A1Q5TAT6 SNORD32B-201ENST00000364460 84 ntBASIC3.74□□□□□ -1.81
COL13A1Q5TAT6 U8.7-201ENST00000364940 136 ntBASIC3.74□□□□□ -1.81
COL13A1Q5TAT6 SNORA75.5-201ENST00000391291 81 ntBASIC3.74□□□□□ -1.81
COL13A1Q5TAT6 MIR300-201ENST00000401138 83 ntBASIC3.74□□□□□ -1.81
COL13A1Q5TAT6 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.74□□□□□ -1.81
COL13A1Q5TAT6 RPS27P26-201ENST00000494583 239 ntBASIC3.74□□□□□ -1.81
COL13A1Q5TAT6 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.74□□□□□ -1.81
COL13A1Q5TAT6 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.74□□□□□ -1.81
COL13A1Q5TAT6 RNU6-659P-201ENST00000516454 104 ntBASIC3.74□□□□□ -1.81
COL13A1Q5TAT6 AL670379.2-201ENST00000604983 252 ntBASIC3.74□□□□□ -1.81
COL13A1Q5TAT6 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.74□□□□□ -1.81
COL13A1Q5TAT6 AC012640.5-201ENST00000623897 319 ntBASIC3.74□□□□□ -1.81
COL13A1Q5TAT6 U6.98-201ENST00000637157 84 ntBASIC3.74□□□□□ -1.81
COL13A1Q5TAT6 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.74□□□□□ -1.81
COL13A1Q5TAT6 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
COL13A1Q5TAT6 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
COL13A1Q5TAT6 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
COL13A1Q5TAT6 AP006437.1-201ENST00000641440 3685 ntBASIC3.73□□□□□ -1.81
COL13A1Q5TAT6 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
COL13A1Q5TAT6 SNORA51.4-201ENST00000364993 124 ntBASIC3.73□□□□□ -1.81
COL13A1Q5TAT6 RNU6-1323P-201ENST00000384025 107 ntBASIC3.73□□□□□ -1.81
COL13A1Q5TAT6 RNU6-768P-201ENST00000384683 107 ntBASIC3.73□□□□□ -1.81
COL13A1Q5TAT6 SNORA36B-201ENST00000410438 131 ntBASIC3.73□□□□□ -1.81
COL13A1Q5TAT6 RPL31P61-201ENST00000496160 376 ntBASIC3.73□□□□□ -1.81
COL13A1Q5TAT6 RNU7-116P-201ENST00000516940 62 ntBASIC3.73□□□□□ -1.81
COL13A1Q5TAT6 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.73□□□□□ -1.81
COL13A1Q5TAT6 AP003357.1-201ENST00000604497 148 ntBASIC3.73□□□□□ -1.81
COL13A1Q5TAT6 AC006504.1-201ENST00000562493 3666 ntBASIC3.73□□□□□ -1.81
COL13A1Q5TAT6 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.73□□□□□ -1.81
COL13A1Q5TAT6 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
COL13A1Q5TAT6 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
COL13A1Q5TAT6 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
COL13A1Q5TAT6 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.72□□□□□ -1.81
COL13A1Q5TAT6 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
COL13A1Q5TAT6 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
COL13A1Q5TAT6 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.72□□□□□ -1.81
COL13A1Q5TAT6 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
COL13A1Q5TAT6 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
COL13A1Q5TAT6 MIR518C-201ENST00000384822 101 ntBASIC3.72□□□□□ -1.81
COL13A1Q5TAT6 SNORA79-201ENST00000408376 140 ntBASIC3.72□□□□□ -1.81
COL13A1Q5TAT6 RNA5SP38-201ENST00000410750 119 ntBASIC3.72□□□□□ -1.81
COL13A1Q5TAT6 HMGN2P9-201ENST00000476875 229 ntBASIC3.72□□□□□ -1.81
COL13A1Q5TAT6 RPS26P15-201ENST00000488067 348 ntBASIC3.72□□□□□ -1.81
COL13A1Q5TAT6 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC3.72□□□□□ -1.81
COL13A1Q5TAT6 RNU5F-4P-201ENST00000516581 114 ntBASIC3.72□□□□□ -1.81
COL13A1Q5TAT6 SNORA31.21-201ENST00000517180 77 ntBASIC3.72□□□□□ -1.81
COL13A1Q5TAT6 MIR5047-201ENST00000579212 100 ntBASIC3.72□□□□□ -1.81
COL13A1Q5TAT6 AC008739.2-201ENST00000597006 317 ntBASIC3.72□□□□□ -1.81
COL13A1Q5TAT6 AC068647.2-201ENST00000637380 353 ntBASIC3.72□□□□□ -1.81
COL13A1Q5TAT6 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.72□□□□□ -1.81
COL13A1Q5TAT6 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
COL13A1Q5TAT6 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
COL13A1Q5TAT6 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
COL13A1Q5TAT6 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.71□□□□□ -1.81
COL13A1Q5TAT6 CENPCP1-201ENST00000533085 2578 ntBASIC3.71□□□□□ -1.81
COL13A1Q5TAT6 RNU6-153P-201ENST00000364422 104 ntBASIC3.71□□□□□ -1.82
COL13A1Q5TAT6 RNU6-1180P-201ENST00000364935 107 ntBASIC3.71□□□□□ -1.82
COL13A1Q5TAT6 RNU6-597P-201ENST00000365620 102 ntBASIC3.71□□□□□ -1.82
COL13A1Q5TAT6 RNU2-52P-201ENST00000410680 190 ntBASIC3.71□□□□□ -1.82
COL13A1Q5TAT6 AC117454.1-201ENST00000491120 168 ntBASIC3.71□□□□□ -1.82
COL13A1Q5TAT6 RNU6-561P-201ENST00000516222 102 ntBASIC3.71□□□□□ -1.82
COL13A1Q5TAT6 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC3.71□□□□□ -1.82
COL13A1Q5TAT6 Six3os1_7.1-201ENST00000621512 201 ntBASIC3.71□□□□□ -1.82
COL13A1Q5TAT6 AC006111.3-201ENST00000622137 383 ntBASIC3.71□□□□□ -1.82
COL13A1Q5TAT6 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.71□□□□□ -1.82
COL13A1Q5TAT6 AC018555.1-201ENST00000567548 1980 ntBASIC3.71□□□□□ -1.82
COL13A1Q5TAT6 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.7□□□□□ -1.82
COL13A1Q5TAT6 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.7□□□□□ -1.82
COL13A1Q5TAT6 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.7□□□□□ -1.82
COL13A1Q5TAT6 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
COL13A1Q5TAT6 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
COL13A1Q5TAT6 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
COL13A1Q5TAT6 RNU6-460P-201ENST00000391158 108 ntBASIC3.7□□□□□ -1.82
COL13A1Q5TAT6 SNORA12-201ENST00000391162 147 ntBASIC3.7□□□□□ -1.82
COL13A1Q5TAT6 RNA5SP496-201ENST00000391240 109 ntBASIC3.7□□□□□ -1.82
COL13A1Q5TAT6 AP000567.1-201ENST00000406413 156 ntBASIC3.7□□□□□ -1.82
COL13A1Q5TAT6 AC097463.2-201ENST00000421074 142 ntBASIC3.7□□□□□ -1.82
COL13A1Q5TAT6 AL159169.1-201ENST00000421119 127 ntBASIC3.7□□□□□ -1.82
COL13A1Q5TAT6 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC3.7□□□□□ -1.82
COL13A1Q5TAT6 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC3.7□□□□□ -1.82
COL13A1Q5TAT6 AC079600.2-201ENST00000550076 130 ntBASIC3.7□□□□□ -1.82
COL13A1Q5TAT6 AC090049.2-201ENST00000550377 109 ntBASIC3.7□□□□□ -1.82
COL13A1Q5TAT6 AC127455.1-201ENST00000565496 145 ntBASIC3.7□□□□□ -1.82
COL13A1Q5TAT6 AP003122.5-201ENST00000527668 3766 ntBASIC3.7□□□□□ -1.82
COL13A1Q5TAT6 IPO8P1-201ENST00000455509 3109 ntBASIC3.7□□□□□ -1.82
COL13A1Q5TAT6 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
COL13A1Q5TAT6 AC007256.1-201ENST00000392253 2765 ntBASIC3.69□□□□□ -1.82
COL13A1Q5TAT6 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
COL13A1Q5TAT6 ZNF702P-202ENST00000434269 1966 ntBASIC3.69□□□□□ -1.82
COL13A1Q5TAT6 Y_RNA.251-201ENST00000364551 99 ntBASIC3.69□□□□□ -1.82
COL13A1Q5TAT6 RN7SKP220-201ENST00000410611 288 ntBASIC3.69□□□□□ -1.82
COL13A1Q5TAT6 RNU6-383P-201ENST00000410864 94 ntBASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms