Protein–RNA interactions for Protein: Q9P0J7

KCMF1, E3 ubiquitin-protein ligase KCMF1, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCMF1Q9P0J7 RNU7-120P-201ENST00000459334 63 ntBASIC2.87□□□□□ -1.95
KCMF1Q9P0J7 RNU7-57P-201ENST00000459540 60 ntBASIC2.87□□□□□ -1.95
KCMF1Q9P0J7 CKS1BP2-201ENST00000497342 240 ntBASIC2.87□□□□□ -1.95
KCMF1Q9P0J7 RN7SKP282-201ENST00000516824 299 ntBASIC2.87□□□□□ -1.95
KCMF1Q9P0J7 AC009127.3-201ENST00000570531 403 ntBASIC2.87□□□□□ -1.95
KCMF1Q9P0J7 AC004832.5-201ENST00000608677 401 ntBASIC2.87□□□□□ -1.95
KCMF1Q9P0J7 AL008718.3-201ENST00000610217 321 ntBASIC2.87□□□□□ -1.95
KCMF1Q9P0J7 AC007318.2-201ENST00000620999 243 ntBASIC2.87□□□□□ -1.95
KCMF1Q9P0J7 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.87□□□□□ -1.95
KCMF1Q9P0J7 AL035425.3-201ENST00000564206 4996 ntBASIC2.87□□□□□ -1.95
KCMF1Q9P0J7 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
KCMF1Q9P0J7 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.86□□□□□ -1.95
KCMF1Q9P0J7 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.86□□□□□ -1.95
KCMF1Q9P0J7 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.86□□□□□ -1.95
KCMF1Q9P0J7 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.86□□□□□ -1.95
KCMF1Q9P0J7 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.86□□□□□ -1.95
KCMF1Q9P0J7 Y_RNA.180-201ENST00000363867 113 ntBASIC2.86□□□□□ -1.95
KCMF1Q9P0J7 SNORD14D-201ENST00000384390 87 ntBASIC2.86□□□□□ -1.95
KCMF1Q9P0J7 RNU6-493P-201ENST00000391321 108 ntBASIC2.86□□□□□ -1.95
KCMF1Q9P0J7 NDUFB4P4-201ENST00000404822 243 ntBASIC2.86□□□□□ -1.95
KCMF1Q9P0J7 RNA5SP76-201ENST00000516277 87 ntBASIC2.86□□□□□ -1.95
KCMF1Q9P0J7 AC087441.2-201ENST00000529141 262 ntBASIC2.86□□□□□ -1.95
KCMF1Q9P0J7 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.86□□□□□ -1.95
KCMF1Q9P0J7 MIR5739-201ENST00000619803 80 ntBASIC2.86□□□□□ -1.95
KCMF1Q9P0J7 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
KCMF1Q9P0J7 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.85□□□□□ -1.95
KCMF1Q9P0J7 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
KCMF1Q9P0J7 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
KCMF1Q9P0J7 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
KCMF1Q9P0J7 AL365361.1-201ENST00000566942 3481 ntBASIC2.85□□□□□ -1.95
KCMF1Q9P0J7 AC104332.1-201ENST00000440471 797 ntBASIC2.85□□□□□ -1.95
KCMF1Q9P0J7 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.85□□□□□ -1.95
KCMF1Q9P0J7 AC074290.1-201ENST00000448883 135 ntBASIC2.85□□□□□ -1.95
KCMF1Q9P0J7 AC114982.1-201ENST00000469402 321 ntBASIC2.85□□□□□ -1.95
KCMF1Q9P0J7 RNU6-861P-201ENST00000516745 106 ntBASIC2.85□□□□□ -1.95
KCMF1Q9P0J7 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.85□□□□□ -1.95
KCMF1Q9P0J7 AC018630.3-201ENST00000542637 96 ntBASIC2.85□□□□□ -1.95
KCMF1Q9P0J7 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
KCMF1Q9P0J7 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.85□□□□□ -1.95
KCMF1Q9P0J7 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
KCMF1Q9P0J7 AL365265.1-201ENST00000621045 234 ntBASIC2.85□□□□□ -1.95
KCMF1Q9P0J7 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.85□□□□□ -1.95
KCMF1Q9P0J7 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.85□□□□□ -1.95
KCMF1Q9P0J7 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.85□□□□□ -1.95
KCMF1Q9P0J7 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
KCMF1Q9P0J7 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.85□□□□□ -1.95
KCMF1Q9P0J7 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
KCMF1Q9P0J7 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.84□□□□□ -1.95
KCMF1Q9P0J7 SNORA71.1-201ENST00000364523 117 ntBASIC2.84□□□□□ -1.95
KCMF1Q9P0J7 Y_RNA.262-201ENST00000364641 102 ntBASIC2.84□□□□□ -1.95
KCMF1Q9P0J7 SNORD31B-201ENST00000364977 69 ntBASIC2.84□□□□□ -1.95
KCMF1Q9P0J7 Y_RNA.304-201ENST00000365011 112 ntBASIC2.84□□□□□ -1.95
KCMF1Q9P0J7 RNU6-763P-201ENST00000390865 106 ntBASIC2.84□□□□□ -1.95
KCMF1Q9P0J7 MIR1289-1-201ENST00000408836 144 ntBASIC2.84□□□□□ -1.95
KCMF1Q9P0J7 RNA5SP274-201ENST00000410484 108 ntBASIC2.84□□□□□ -1.95
KCMF1Q9P0J7 RNA5SP344-201ENST00000411081 104 ntBASIC2.84□□□□□ -1.95
KCMF1Q9P0J7 RNU2-32P-201ENST00000411193 191 ntBASIC2.84□□□□□ -1.95
KCMF1Q9P0J7 AL135790.2-201ENST00000437701 267 ntBASIC2.84□□□□□ -1.95
KCMF1Q9P0J7 AC016717.1-201ENST00000448918 286 ntBASIC2.84□□□□□ -1.95
KCMF1Q9P0J7 Y_RNA.637-201ENST00000459424 114 ntBASIC2.84□□□□□ -1.95
KCMF1Q9P0J7 S100A11P2-201ENST00000467589 312 ntBASIC2.84□□□□□ -1.95
KCMF1Q9P0J7 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC2.84□□□□□ -1.95
KCMF1Q9P0J7 AP005660.1-201ENST00000522972 293 ntBASIC2.84□□□□□ -1.95
KCMF1Q9P0J7 MIR1248-201ENST00000629190 106 ntBASIC2.84□□□□□ -1.95
KCMF1Q9P0J7 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
KCMF1Q9P0J7 AC093010.3-201ENST00000570269 15214 ntBASIC2.83□□□□□ -1.96
KCMF1Q9P0J7 Z82209.1-201ENST00000422141 2135 ntBASIC2.83□□□□□ -1.96
KCMF1Q9P0J7 RNU6-682P-201ENST00000363843 106 ntBASIC2.83□□□□□ -1.96
KCMF1Q9P0J7 RNU6-743P-201ENST00000364151 106 ntBASIC2.83□□□□□ -1.96
KCMF1Q9P0J7 RNU6-438P-201ENST00000365561 103 ntBASIC2.83□□□□□ -1.96
KCMF1Q9P0J7 RNU6-546P-201ENST00000383991 107 ntBASIC2.83□□□□□ -1.96
KCMF1Q9P0J7 RNU6-918P-201ENST00000391219 106 ntBASIC2.83□□□□□ -1.96
KCMF1Q9P0J7 PCNPP3-201ENST00000393579 471 ntBASIC2.83□□□□□ -1.96
KCMF1Q9P0J7 AL031121.1-201ENST00000406553 254 ntBASIC2.83□□□□□ -1.96
KCMF1Q9P0J7 RNU6-855P-201ENST00000410395 104 ntBASIC2.83□□□□□ -1.96
KCMF1Q9P0J7 RNU6-57P-201ENST00000411348 103 ntBASIC2.83□□□□□ -1.96
KCMF1Q9P0J7 OOSP1P1-201ENST00000423265 274 ntBASIC2.83□□□□□ -1.96
KCMF1Q9P0J7 AC022018.1-201ENST00000430685 241 ntBASIC2.83□□□□□ -1.96
KCMF1Q9P0J7 AL161788.1-201ENST00000441805 169 ntBASIC2.83□□□□□ -1.96
KCMF1Q9P0J7 UQCRHP3-201ENST00000451503 251 ntBASIC2.83□□□□□ -1.96
KCMF1Q9P0J7 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.83□□□□□ -1.96
KCMF1Q9P0J7 U8.19-201ENST00000459095 133 ntBASIC2.83□□□□□ -1.96
KCMF1Q9P0J7 AC080013.2-201ENST00000460866 323 ntBASIC2.83□□□□□ -1.96
KCMF1Q9P0J7 HMGB3P3-201ENST00000510526 400 ntBASIC2.83□□□□□ -1.96
KCMF1Q9P0J7 RN7SKP43-201ENST00000516173 320 ntBASIC2.83□□□□□ -1.96
KCMF1Q9P0J7 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.83□□□□□ -1.96
KCMF1Q9P0J7 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.83□□□□□ -1.96
KCMF1Q9P0J7 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC2.83□□□□□ -1.96
KCMF1Q9P0J7 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.83□□□□□ -1.96
KCMF1Q9P0J7 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
KCMF1Q9P0J7 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
KCMF1Q9P0J7 RNU6-801P-201ENST00000364087 105 ntBASIC2.82□□□□□ -1.96
KCMF1Q9P0J7 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.82□□□□□ -1.96
KCMF1Q9P0J7 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.82□□□□□ -1.96
KCMF1Q9P0J7 RNU6-710P-201ENST00000410424 105 ntBASIC2.82□□□□□ -1.96
KCMF1Q9P0J7 RPL23AP58-201ENST00000440453 469 ntBASIC2.82□□□□□ -1.96
KCMF1Q9P0J7 CYP2C59P-201ENST00000457790 269 ntBASIC2.82□□□□□ -1.96
KCMF1Q9P0J7 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.82□□□□□ -1.96
KCMF1Q9P0J7 AC136628.3-201ENST00000521868 290 ntBASIC2.82□□□□□ -1.96
KCMF1Q9P0J7 AC007536.1-201ENST00000533382 349 ntBASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms