Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.73□□□□□ -1.81
DEPDC4Q8N2C3 RNA5SP196-201ENST00000625967 102 ntBASIC3.73□□□□□ -1.81
DEPDC4Q8N2C3 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
DEPDC4Q8N2C3 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.73□□□□□ -1.81
DEPDC4Q8N2C3 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
DEPDC4Q8N2C3 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
DEPDC4Q8N2C3 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.72□□□□□ -1.81
DEPDC4Q8N2C3 Y_RNA.111-201ENST00000363248 100 ntBASIC3.72□□□□□ -1.81
DEPDC4Q8N2C3 Y_RNA.120-201ENST00000363304 110 ntBASIC3.72□□□□□ -1.81
DEPDC4Q8N2C3 RNU1-23P-201ENST00000363361 144 ntBASIC3.72□□□□□ -1.81
DEPDC4Q8N2C3 RNU1-96P-201ENST00000364163 162 ntBASIC3.72□□□□□ -1.81
DEPDC4Q8N2C3 Y_RNA.796-201ENST00000364268 102 ntBASIC3.72□□□□□ -1.81
DEPDC4Q8N2C3 Y_RNA.799-201ENST00000364992 102 ntBASIC3.72□□□□□ -1.81
DEPDC4Q8N2C3 RNU6-1056P-201ENST00000383996 107 ntBASIC3.72□□□□□ -1.81
DEPDC4Q8N2C3 RNU6-136P-201ENST00000384663 107 ntBASIC3.72□□□□□ -1.81
DEPDC4Q8N2C3 RNU6-628P-201ENST00000410675 107 ntBASIC3.72□□□□□ -1.81
DEPDC4Q8N2C3 RNU2-48P-201ENST00000410694 191 ntBASIC3.72□□□□□ -1.81
DEPDC4Q8N2C3 RPL39P40-201ENST00000445481 146 ntBASIC3.72□□□□□ -1.81
DEPDC4Q8N2C3 RPS29P12-201ENST00000460178 152 ntBASIC3.72□□□□□ -1.81
DEPDC4Q8N2C3 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC3.72□□□□□ -1.81
DEPDC4Q8N2C3 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.72□□□□□ -1.81
DEPDC4Q8N2C3 AC006130.2-201ENST00000586202 326 ntBASIC3.72□□□□□ -1.81
DEPDC4Q8N2C3 U7.8-201ENST00000619968 63 ntBASIC3.72□□□□□ -1.81
DEPDC4Q8N2C3 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
DEPDC4Q8N2C3 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
DEPDC4Q8N2C3 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.72□□□□□ -1.81
DEPDC4Q8N2C3 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.71□□□□□ -1.81
DEPDC4Q8N2C3 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
DEPDC4Q8N2C3 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
DEPDC4Q8N2C3 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.71□□□□□ -1.82
DEPDC4Q8N2C3 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.71□□□□□ -1.82
DEPDC4Q8N2C3 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
DEPDC4Q8N2C3 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
DEPDC4Q8N2C3 RNU1-14P-201ENST00000362759 152 ntBASIC3.71□□□□□ -1.82
DEPDC4Q8N2C3 RNU1-18P-201ENST00000363062 164 ntBASIC3.71□□□□□ -1.82
DEPDC4Q8N2C3 RNU6-1325P-201ENST00000364905 105 ntBASIC3.71□□□□□ -1.82
DEPDC4Q8N2C3 RNU2-70P-201ENST00000410718 179 ntBASIC3.71□□□□□ -1.82
DEPDC4Q8N2C3 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.71□□□□□ -1.82
DEPDC4Q8N2C3 RNA5SP49-201ENST00000516450 115 ntBASIC3.71□□□□□ -1.82
DEPDC4Q8N2C3 SNORA67.7-201ENST00000516664 135 ntBASIC3.71□□□□□ -1.82
DEPDC4Q8N2C3 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
DEPDC4Q8N2C3 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
DEPDC4Q8N2C3 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
DEPDC4Q8N2C3 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.7□□□□□ -1.82
DEPDC4Q8N2C3 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
DEPDC4Q8N2C3 MIR340-201ENST00000362125 95 ntBASIC3.7□□□□□ -1.82
DEPDC4Q8N2C3 RNU6-1209P-201ENST00000363655 107 ntBASIC3.7□□□□□ -1.82
DEPDC4Q8N2C3 SNORD35B-201ENST00000363660 87 ntBASIC3.7□□□□□ -1.82
DEPDC4Q8N2C3 Y_RNA.634-201ENST00000364811 113 ntBASIC3.7□□□□□ -1.82
DEPDC4Q8N2C3 MIR561-201ENST00000385216 97 ntBASIC3.7□□□□□ -1.82
DEPDC4Q8N2C3 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.7□□□□□ -1.82
DEPDC4Q8N2C3 AL139247.1-201ENST00000422768 325 ntBASIC3.7□□□□□ -1.82
DEPDC4Q8N2C3 AL133162.1-201ENST00000463228 453 ntBASIC3.7□□□□□ -1.82
DEPDC4Q8N2C3 AC106707.2-201ENST00000484182 374 ntBASIC3.7□□□□□ -1.82
DEPDC4Q8N2C3 AC131055.1-201ENST00000584626 316 ntBASIC3.7□□□□□ -1.82
DEPDC4Q8N2C3 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC3.7□□□□□ -1.82
DEPDC4Q8N2C3 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
DEPDC4Q8N2C3 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
DEPDC4Q8N2C3 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.69□□□□□ -1.82
DEPDC4Q8N2C3 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.69□□□□□ -1.82
DEPDC4Q8N2C3 OR9P1P-201ENST00000496431 281 ntBASIC3.69□□□□□ -1.82
DEPDC4Q8N2C3 RNA5SP519-201ENST00000516480 119 ntBASIC3.69□□□□□ -1.82
DEPDC4Q8N2C3 Y_RNA.692-201ENST00000516627 105 ntBASIC3.69□□□□□ -1.82
DEPDC4Q8N2C3 MIR3186-201ENST00000577404 85 ntBASIC3.69□□□□□ -1.82
DEPDC4Q8N2C3 MIR3158-1-201ENST00000583596 81 ntBASIC3.69□□□□□ -1.82
DEPDC4Q8N2C3 MIR3616-201ENST00000584070 92 ntBASIC3.69□□□□□ -1.82
DEPDC4Q8N2C3 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.69□□□□□ -1.82
DEPDC4Q8N2C3 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC3.69□□□□□ -1.82
DEPDC4Q8N2C3 MIR492-201ENST00000638676 116 ntBASIC3.69□□□□□ -1.82
DEPDC4Q8N2C3 AC110774.1-201ENST00000623567 2018 ntBASIC3.69□□□□□ -1.82
DEPDC4Q8N2C3 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
DEPDC4Q8N2C3 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
DEPDC4Q8N2C3 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.68□□□□□ -1.82
DEPDC4Q8N2C3 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.68□□□□□ -1.82
DEPDC4Q8N2C3 RNU6-743P-201ENST00000364151 106 ntBASIC3.68□□□□□ -1.82
DEPDC4Q8N2C3 RNU1-13P-201ENST00000384499 162 ntBASIC3.68□□□□□ -1.82
DEPDC4Q8N2C3 MIR670-201ENST00000390142 98 ntBASIC3.68□□□□□ -1.82
DEPDC4Q8N2C3 AL159169.1-201ENST00000421119 127 ntBASIC3.68□□□□□ -1.82
DEPDC4Q8N2C3 NDUFB1P1-201ENST00000435191 180 ntBASIC3.68□□□□□ -1.82
DEPDC4Q8N2C3 RNU6-991P-201ENST00000516168 107 ntBASIC3.68□□□□□ -1.82
DEPDC4Q8N2C3 MIR4444-1-201ENST00000581696 74 ntBASIC3.68□□□□□ -1.82
DEPDC4Q8N2C3 MIR4444-2-201ENST00000584390 74 ntBASIC3.68□□□□□ -1.82
DEPDC4Q8N2C3 JPX_2.1-201ENST00000614161 69 ntBASIC3.68□□□□□ -1.82
DEPDC4Q8N2C3 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.68□□□□□ -1.82
DEPDC4Q8N2C3 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
DEPDC4Q8N2C3 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
DEPDC4Q8N2C3 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
DEPDC4Q8N2C3 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
DEPDC4Q8N2C3 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
DEPDC4Q8N2C3 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.67□□□□□ -1.82
DEPDC4Q8N2C3 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
DEPDC4Q8N2C3 CEP170P1-201ENST00000502249 4587 ntBASIC3.67□□□□□ -1.82
DEPDC4Q8N2C3 SNORA60-201ENST00000362396 134 ntBASIC3.67□□□□□ -1.82
DEPDC4Q8N2C3 Y_RNA.280-201ENST00000364765 112 ntBASIC3.67□□□□□ -1.82
DEPDC4Q8N2C3 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
DEPDC4Q8N2C3 RNA5SP317-201ENST00000410176 116 ntBASIC3.67□□□□□ -1.82
DEPDC4Q8N2C3 RNA5SP311-201ENST00000411290 116 ntBASIC3.67□□□□□ -1.82
DEPDC4Q8N2C3 AC060773.1-201ENST00000421698 310 ntBASIC3.67□□□□□ -1.82
DEPDC4Q8N2C3 TBCAP1-201ENST00000436520 327 ntBASIC3.67□□□□□ -1.82
DEPDC4Q8N2C3 AL353689.1-201ENST00000438895 199 ntBASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms