Protein–RNA interactions for Protein: Q5VXU3

CHIC1, Cysteine-rich hydrophobic domain-containing protein 1, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHIC1Q5VXU3 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.08
CHIC1Q5VXU3 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
CHIC1Q5VXU3 SNORD90-201ENST00000391145 111 ntBASIC8.27□□□□□ -1.09
CHIC1Q5VXU3 RNU6ATAC33P-201ENST00000408647 126 ntBASIC8.27□□□□□ -1.09
CHIC1Q5VXU3 snoU13.20-201ENST00000459180 104 ntBASIC8.27□□□□□ -1.09
CHIC1Q5VXU3 AL671862.1-201ENST00000515851 349 ntBASIC8.27□□□□□ -1.09
CHIC1Q5VXU3 CEP170P1-201ENST00000502249 4587 ntBASIC8.27□□□□□ -1.09
CHIC1Q5VXU3 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
CHIC1Q5VXU3 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC8.26□□□□□ -1.09
CHIC1Q5VXU3 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
CHIC1Q5VXU3 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC8.26□□□□□ -1.09
CHIC1Q5VXU3 RNU6-862P-201ENST00000362804 105 ntBASIC8.26□□□□□ -1.09
CHIC1Q5VXU3 RNU6-291P-201ENST00000384720 107 ntBASIC8.26□□□□□ -1.09
CHIC1Q5VXU3 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC8.26□□□□□ -1.09
CHIC1Q5VXU3 MIR8053-201ENST00000613344 75 ntBASIC8.26□□□□□ -1.09
CHIC1Q5VXU3 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
CHIC1Q5VXU3 AC104623.2-202ENST00000623477 4002 ntBASIC8.26□□□□□ -1.09
CHIC1Q5VXU3 MFSD8-216ENST00000641147 4009 ntBASIC8.26□□□□□ -1.09
CHIC1Q5VXU3 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC8.26□□□□□ -1.09
CHIC1Q5VXU3 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
CHIC1Q5VXU3 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC8.25□□□□□ -1.09
CHIC1Q5VXU3 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
CHIC1Q5VXU3 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
CHIC1Q5VXU3 RNA5SP191-201ENST00000362585 102 ntBASIC8.25□□□□□ -1.09
CHIC1Q5VXU3 MIR516B2-201ENST00000385190 85 ntBASIC8.25□□□□□ -1.09
CHIC1Q5VXU3 MIR548U-201ENST00000390728 81 ntBASIC8.25□□□□□ -1.09
CHIC1Q5VXU3 AC005908.1-201ENST00000468701 347 ntBASIC8.25□□□□□ -1.09
CHIC1Q5VXU3 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC8.25□□□□□ -1.09
CHIC1Q5VXU3 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC8.25□□□□□ -1.09
CHIC1Q5VXU3 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC8.25□□□□□ -1.09
CHIC1Q5VXU3 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC8.25□□□□□ -1.09
CHIC1Q5VXU3 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC8.25□□□□□ -1.09
CHIC1Q5VXU3 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC8.25□□□□□ -1.09
CHIC1Q5VXU3 AP000542.2-201ENST00000623199 6179 ntBASIC8.25□□□□□ -1.09
CHIC1Q5VXU3 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
CHIC1Q5VXU3 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC8.24□□□□□ -1.09
CHIC1Q5VXU3 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC8.24□□□□□ -1.09
CHIC1Q5VXU3 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC8.24□□□□□ -1.09
CHIC1Q5VXU3 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC8.24□□□□□ -1.09
CHIC1Q5VXU3 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
CHIC1Q5VXU3 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
CHIC1Q5VXU3 BX510359.1-201ENST00000456973 237 ntBASIC8.24□□□□□ -1.09
CHIC1Q5VXU3 RNU6-1057P-201ENST00000517162 102 ntBASIC8.24□□□□□ -1.09
CHIC1Q5VXU3 CYCSP40-201ENST00000575927 294 ntBASIC8.24□□□□□ -1.09
CHIC1Q5VXU3 MIR4646-201ENST00000580775 63 ntBASIC8.24□□□□□ -1.09
CHIC1Q5VXU3 MIR3675-201ENST00000583661 73 ntBASIC8.24□□□□□ -1.09
CHIC1Q5VXU3 SNX18P1Y-201ENST00000616231 511 ntBASIC8.24□□□□□ -1.09
CHIC1Q5VXU3 MIR8054-201ENST00000620877 86 ntBASIC8.24□□□□□ -1.09
CHIC1Q5VXU3 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
CHIC1Q5VXU3 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
CHIC1Q5VXU3 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC8.24□□□□□ -1.09
CHIC1Q5VXU3 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC8.24□□□□□ -1.09
CHIC1Q5VXU3 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
CHIC1Q5VXU3 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
CHIC1Q5VXU3 MIR218-1-201ENST00000384999 110 ntBASIC8.23□□□□□ -1.09
CHIC1Q5VXU3 RNA5SP109-201ENST00000391010 116 ntBASIC8.23□□□□□ -1.09
CHIC1Q5VXU3 SNORA40.6-201ENST00000391153 128 ntBASIC8.23□□□□□ -1.09
CHIC1Q5VXU3 RNU2-48P-201ENST00000410694 191 ntBASIC8.23□□□□□ -1.09
CHIC1Q5VXU3 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC8.23□□□□□ -1.09
CHIC1Q5VXU3 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC8.23□□□□□ -1.09
CHIC1Q5VXU3 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
CHIC1Q5VXU3 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC8.23□□□□□ -1.09
CHIC1Q5VXU3 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC8.23□□□□□ -1.09
CHIC1Q5VXU3 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
CHIC1Q5VXU3 AC026523.2-201ENST00000625039 7739 ntBASIC8.22□□□□□ -1.09
CHIC1Q5VXU3 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
CHIC1Q5VXU3 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC8.22□□□□□ -1.09
CHIC1Q5VXU3 AC105129.1-201ENST00000560250 297 ntBASIC8.22□□□□□ -1.09
CHIC1Q5VXU3 AC022149.2-201ENST00000621061 203 ntBASIC8.22□□□□□ -1.09
CHIC1Q5VXU3 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC8.22□□□□□ -1.09
CHIC1Q5VXU3 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC8.22□□□□□ -1.09
CHIC1Q5VXU3 USP8-204ENST00000425032 3559 ntTSL 2 BASIC8.22□□□□□ -1.09
CHIC1Q5VXU3 AL161722.3-201ENST00000605789 2983 ntBASIC8.21□□□□□ -1.09
CHIC1Q5VXU3 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.1
CHIC1Q5VXU3 MIR95-201ENST00000385072 81 ntBASIC8.21□□□□□ -1.1
CHIC1Q5VXU3 MIR136-201ENST00000385207 82 ntBASIC8.21□□□□□ -1.1
CHIC1Q5VXU3 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC8.21□□□□□ -1.1
CHIC1Q5VXU3 CKS1BP6-201ENST00000424932 240 ntBASIC8.21□□□□□ -1.1
CHIC1Q5VXU3 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC8.21□□□□□ -1.1
CHIC1Q5VXU3 AL031183.1-201ENST00000457667 207 ntBASIC8.21□□□□□ -1.1
CHIC1Q5VXU3 SNORA48.11-201ENST00000517015 89 ntBASIC8.21□□□□□ -1.1
CHIC1Q5VXU3 RNU6-709P-201ENST00000517257 104 ntBASIC8.21□□□□□ -1.1
CHIC1Q5VXU3 SCARNA11.3-201ENST00000517276 130 ntBASIC8.21□□□□□ -1.1
CHIC1Q5VXU3 AC133485.1-201ENST00000567176 124 ntBASIC8.21□□□□□ -1.1
CHIC1Q5VXU3 MIR5195-201ENST00000583555 115 ntBASIC8.21□□□□□ -1.1
CHIC1Q5VXU3 MIR6810-201ENST00000622701 70 ntBASIC8.21□□□□□ -1.1
CHIC1Q5VXU3 MIR7157-201ENST00000635801 60 ntBASIC8.21□□□□□ -1.1
CHIC1Q5VXU3 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC8.21□□□□□ -1.1
CHIC1Q5VXU3 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
CHIC1Q5VXU3 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC8.21□□□□□ -1.1
CHIC1Q5VXU3 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
CHIC1Q5VXU3 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
CHIC1Q5VXU3 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
CHIC1Q5VXU3 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC8.2□□□□□ -1.1
CHIC1Q5VXU3 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
CHIC1Q5VXU3 Y_RNA.371-201ENST00000365591 113 ntBASIC8.2□□□□□ -1.1
CHIC1Q5VXU3 RNU6-1067P-201ENST00000384752 107 ntBASIC8.2□□□□□ -1.1
CHIC1Q5VXU3 MIR452-201ENST00000385020 85 ntBASIC8.2□□□□□ -1.1
CHIC1Q5VXU3 AC006466.1-201ENST00000438721 289 ntBASIC8.2□□□□□ -1.1
CHIC1Q5VXU3 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC8.2□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms