Protein–RNA interactions for Protein: Q53F19

NCBP3, Nuclear cap-binding protein subunit 3, humanhuman

Known RBP Predictions only

Length 620 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3Q53F19 FAM27B-201ENST00000610601 213 ntBASIC6.24□□□□□ -1.41
NCBP3Q53F19 MIR8058-201ENST00000615737 89 ntBASIC6.24□□□□□ -1.41
NCBP3Q53F19 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
NCBP3Q53F19 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
NCBP3Q53F19 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC6.24□□□□□ -1.41
NCBP3Q53F19 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC6.24□□□□□ -1.41
NCBP3Q53F19 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
NCBP3Q53F19 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
NCBP3Q53F19 RNU6-457P-201ENST00000363999 107 ntBASIC6.23□□□□□ -1.41
NCBP3Q53F19 Y_RNA.470-201ENST00000384307 117 ntBASIC6.23□□□□□ -1.41
NCBP3Q53F19 Y_RNA.494-201ENST00000384432 111 ntBASIC6.23□□□□□ -1.41
NCBP3Q53F19 MIR921-201ENST00000401133 56 ntBASIC6.23□□□□□ -1.41
NCBP3Q53F19 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC6.23□□□□□ -1.41
NCBP3Q53F19 AL135938.1-201ENST00000443141 297 ntBASIC6.23□□□□□ -1.41
NCBP3Q53F19 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC6.23□□□□□ -1.41
NCBP3Q53F19 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC6.23□□□□□ -1.41
NCBP3Q53F19 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC6.23□□□□□ -1.41
NCBP3Q53F19 MIR3667-201ENST00000581025 74 ntBASIC6.23□□□□□ -1.41
NCBP3Q53F19 RN7SL690P-201ENST00000582087 240 ntBASIC6.23□□□□□ -1.41
NCBP3Q53F19 CTSLP2-204ENST00000629029 392 ntBASIC6.23□□□□□ -1.41
NCBP3Q53F19 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC6.23□□□□□ -1.41
NCBP3Q53F19 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
NCBP3Q53F19 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
NCBP3Q53F19 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
NCBP3Q53F19 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC6.22□□□□□ -1.41
NCBP3Q53F19 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
NCBP3Q53F19 RNU1-101P-201ENST00000391171 127 ntBASIC6.22□□□□□ -1.41
NCBP3Q53F19 AC009414.1-201ENST00000427200 443 ntBASIC6.22□□□□□ -1.41
NCBP3Q53F19 RPS26P2-201ENST00000440331 348 ntBASIC6.22□□□□□ -1.41
NCBP3Q53F19 MIR1270-201ENST00000459320 83 ntBASIC6.22□□□□□ -1.41
NCBP3Q53F19 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC6.22□□□□□ -1.41
NCBP3Q53F19 AC090821.2-201ENST00000523552 176 ntBASIC6.22□□□□□ -1.41
NCBP3Q53F19 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC6.22□□□□□ -1.41
NCBP3Q53F19 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
NCBP3Q53F19 AC092435.4-201ENST00000623012 4159 ntBASIC6.22□□□□□ -1.41
NCBP3Q53F19 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
NCBP3Q53F19 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC6.22□□□□□ -1.41
NCBP3Q53F19 SNORD115-27-201ENST00000364430 82 ntBASIC6.21□□□□□ -1.42
NCBP3Q53F19 Y_RNA.247-201ENST00000364500 92 ntBASIC6.21□□□□□ -1.42
NCBP3Q53F19 RNU6-524P-201ENST00000384270 107 ntBASIC6.21□□□□□ -1.42
NCBP3Q53F19 AL357552.1-201ENST00000445254 415 ntBASIC6.21□□□□□ -1.42
NCBP3Q53F19 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC6.21□□□□□ -1.42
NCBP3Q53F19 AC091042.1-201ENST00000579213 173 ntBASIC6.21□□□□□ -1.42
NCBP3Q53F19 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
NCBP3Q53F19 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
NCBP3Q53F19 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC6.21□□□□□ -1.42
NCBP3Q53F19 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
NCBP3Q53F19 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC6.2□□□□□ -1.42
NCBP3Q53F19 AC091564.4-201ENST00000533934 2194 ntBASIC6.2□□□□□ -1.42
NCBP3Q53F19 FTX-210ENST00000603037 8347 ntTSL 5 BASIC6.2□□□□□ -1.42
NCBP3Q53F19 SNORD115-2-201ENST00000362842 82 ntBASIC6.2□□□□□ -1.42
NCBP3Q53F19 RNU1-132P-201ENST00000364300 164 ntBASIC6.2□□□□□ -1.42
NCBP3Q53F19 SNORD115-20-201ENST00000365099 82 ntBASIC6.2□□□□□ -1.42
NCBP3Q53F19 MIR1271-201ENST00000408537 86 ntBASIC6.2□□□□□ -1.42
NCBP3Q53F19 Z92545.1-201ENST00000411782 234 ntBASIC6.2□□□□□ -1.42
NCBP3Q53F19 AC011753.3-201ENST00000443436 406 ntBASIC6.2□□□□□ -1.42
NCBP3Q53F19 RN7SKP18-201ENST00000516005 275 ntBASIC6.2□□□□□ -1.42
NCBP3Q53F19 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC6.2□□□□□ -1.42
NCBP3Q53F19 MIR3934-201ENST00000579806 107 ntBASIC6.2□□□□□ -1.42
NCBP3Q53F19 AC006130.2-201ENST00000586202 326 ntBASIC6.2□□□□□ -1.42
NCBP3Q53F19 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC6.2□□□□□ -1.42
NCBP3Q53F19 AC008079.2-201ENST00000623543 20396 ntBASIC6.2□□□□□ -1.42
NCBP3Q53F19 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
NCBP3Q53F19 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
NCBP3Q53F19 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
NCBP3Q53F19 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
NCBP3Q53F19 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC6.19□□□□□ -1.42
NCBP3Q53F19 MIR4480-201ENST00000582492 71 ntBASIC6.19□□□□□ -1.42
NCBP3Q53F19 U4atac.1-201ENST00000618345 95 ntBASIC6.19□□□□□ -1.42
NCBP3Q53F19 AC091953.3-201ENST00000623220 236 ntBASIC6.19□□□□□ -1.42
NCBP3Q53F19 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC6.19□□□□□ -1.42
NCBP3Q53F19 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC6.19□□□□□ -1.42
NCBP3Q53F19 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
NCBP3Q53F19 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
NCBP3Q53F19 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
NCBP3Q53F19 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC6.19□□□□□ -1.42
NCBP3Q53F19 LYST-202ENST00000389794 12985 ntTSL 5 BASIC6.18□□□□□ -1.42
NCBP3Q53F19 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
NCBP3Q53F19 SNORA25.6-201ENST00000364121 118 ntBASIC6.18□□□□□ -1.42
NCBP3Q53F19 MIR218-1-201ENST00000384999 110 ntBASIC6.18□□□□□ -1.42
NCBP3Q53F19 AC016831.4-201ENST00000438302 307 ntBASIC6.18□□□□□ -1.42
NCBP3Q53F19 KRTAP19-11P-201ENST00000439851 104 ntBASIC6.18□□□□□ -1.42
NCBP3Q53F19 AL163195.1-201ENST00000496941 348 ntBASIC6.18□□□□□ -1.42
NCBP3Q53F19 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC6.18□□□□□ -1.42
NCBP3Q53F19 AC015912.2-201ENST00000571053 181 ntBASIC6.18□□□□□ -1.42
NCBP3Q53F19 FAM25E-202ENST00000608562 189 ntBASIC6.18□□□□□ -1.42
NCBP3Q53F19 AL353149.1-201ENST00000610667 244 ntBASIC6.18□□□□□ -1.42
NCBP3Q53F19 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC6.18□□□□□ -1.42
NCBP3Q53F19 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
NCBP3Q53F19 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC6.18□□□□□ -1.42
NCBP3Q53F19 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
NCBP3Q53F19 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC6.18□□□□□ -1.42
NCBP3Q53F19 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
NCBP3Q53F19 RNA5SP191-201ENST00000362585 102 ntBASIC6.17□□□□□ -1.42
NCBP3Q53F19 RNVU1-6-201ENST00000364688 164 ntBASIC6.17□□□□□ -1.42
NCBP3Q53F19 PHBP16-201ENST00000446318 950 ntBASIC6.17□□□□□ -1.42
NCBP3Q53F19 TRBV12-1-201ENST00000479785 344 ntBASIC6.17□□□□□ -1.42
NCBP3Q53F19 AC209154.1-201ENST00000582156 337 ntBASIC6.17□□□□□ -1.42
NCBP3Q53F19 uc_338.25-201ENST00000613756 156 ntBASIC6.17□□□□□ -1.42
NCBP3Q53F19 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms