Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 AC107871.2-201ENST00000612894 502 ntBASIC2.47□□□□□ -2.01
SUMO3P55854 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.47□□□□□ -2.01
SUMO3P55854 Y_RNA.26-201ENST00000362539 101 ntBASIC2.46□□□□□ -2.02
SUMO3P55854 SNORD113-8-201ENST00000363497 74 ntBASIC2.46□□□□□ -2.02
SUMO3P55854 Y_RNA.222-201ENST00000364264 102 ntBASIC2.46□□□□□ -2.02
SUMO3P55854 SNORD114-6-201ENST00000364393 72 ntBASIC2.46□□□□□ -2.02
SUMO3P55854 RNU6-1164P-201ENST00000364428 107 ntBASIC2.46□□□□□ -2.02
SUMO3P55854 Y_RNA.446-201ENST00000384178 104 ntBASIC2.46□□□□□ -2.02
SUMO3P55854 RNU6-713P-201ENST00000384761 107 ntBASIC2.46□□□□□ -2.02
SUMO3P55854 MIR181B1-201ENST00000385240 110 ntBASIC2.46□□□□□ -2.02
SUMO3P55854 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.46□□□□□ -2.02
SUMO3P55854 AC005042.3-201ENST00000453230 174 ntBASIC2.46□□□□□ -2.02
SUMO3P55854 RN7SL499P-201ENST00000481141 276 ntBASIC2.46□□□□□ -2.02
SUMO3P55854 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC2.46□□□□□ -2.02
SUMO3P55854 MDM2-232ENST00000544561 213 ntTSL 5 BASIC2.46□□□□□ -2.02
SUMO3P55854 MYL12BP1-201ENST00000569826 507 ntBASIC2.46□□□□□ -2.02
SUMO3P55854 MIR4446-201ENST00000578505 67 ntBASIC2.46□□□□□ -2.02
SUMO3P55854 AC008749.1-201ENST00000597650 306 ntBASIC2.46□□□□□ -2.02
SUMO3P55854 RPL12P50-201ENST00000603116 116 ntBASIC2.46□□□□□ -2.02
SUMO3P55854 SNORD14A-201ENST00000606526 91 ntBASIC2.46□□□□□ -2.02
SUMO3P55854 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.46□□□□□ -2.02
SUMO3P55854 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
SUMO3P55854 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.46□□□□□ -2.02
SUMO3P55854 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
SUMO3P55854 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
SUMO3P55854 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
SUMO3P55854 AP006437.1-201ENST00000641440 3685 ntBASIC2.46□□□□□ -2.02
SUMO3P55854 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
SUMO3P55854 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
SUMO3P55854 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
SUMO3P55854 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.45□□□□□ -2.02
SUMO3P55854 RNU6-1266P-201ENST00000362794 105 ntBASIC2.45□□□□□ -2.02
SUMO3P55854 Y_RNA.243-201ENST00000364481 109 ntBASIC2.45□□□□□ -2.02
SUMO3P55854 RNU6-1240P-201ENST00000365155 104 ntBASIC2.45□□□□□ -2.02
SUMO3P55854 RNU6-21P-201ENST00000384710 107 ntBASIC2.45□□□□□ -2.02
SUMO3P55854 Y_RNA.581-201ENST00000391017 97 ntBASIC2.45□□□□□ -2.02
SUMO3P55854 MIR1302-3-201ENST00000408128 138 ntBASIC2.45□□□□□ -2.02
SUMO3P55854 COTL1P1-201ENST00000422309 375 ntBASIC2.45□□□□□ -2.02
SUMO3P55854 AC025750.2-201ENST00000442609 450 ntBASIC2.45□□□□□ -2.02
SUMO3P55854 SUMO1P2-201ENST00000452524 304 ntBASIC2.45□□□□□ -2.02
SUMO3P55854 AL139109.1-201ENST00000455491 297 ntBASIC2.45□□□□□ -2.02
SUMO3P55854 AP001486.1-201ENST00000463339 476 ntBASIC2.45□□□□□ -2.02
SUMO3P55854 AC098869.1-201ENST00000481627 292 ntBASIC2.45□□□□□ -2.02
SUMO3P55854 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.45□□□□□ -2.02
SUMO3P55854 LARP7P3-201ENST00000579888 337 ntBASIC2.45□□□□□ -2.02
SUMO3P55854 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.45□□□□□ -2.02
SUMO3P55854 MIR7106-201ENST00000612419 65 ntBASIC2.45□□□□□ -2.02
SUMO3P55854 MIR8062-201ENST00000621515 85 ntBASIC2.45□□□□□ -2.02
SUMO3P55854 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.45□□□□□ -2.02
SUMO3P55854 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.45□□□□□ -2.02
SUMO3P55854 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
SUMO3P55854 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.45□□□□□ -2.02
SUMO3P55854 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
SUMO3P55854 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
SUMO3P55854 RNU6-859P-201ENST00000362728 107 ntBASIC2.44□□□□□ -2.02
SUMO3P55854 Y_RNA.331-201ENST00000365267 102 ntBASIC2.44□□□□□ -2.02
SUMO3P55854 MIR568-201ENST00000385036 95 ntBASIC2.44□□□□□ -2.02
SUMO3P55854 RNU6-1199P-201ENST00000411249 104 ntBASIC2.44□□□□□ -2.02
SUMO3P55854 AL353689.1-201ENST00000438895 199 ntBASIC2.44□□□□□ -2.02
SUMO3P55854 IPO7P1-201ENST00000442031 636 ntBASIC2.44□□□□□ -2.02
SUMO3P55854 RN7SL297P-201ENST00000483161 293 ntBASIC2.44□□□□□ -2.02
SUMO3P55854 RNU1-104P-201ENST00000517280 175 ntBASIC2.44□□□□□ -2.02
SUMO3P55854 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.44□□□□□ -2.02
SUMO3P55854 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.44□□□□□ -2.02
SUMO3P55854 AL590240.4-201ENST00000616908 390 ntBASIC2.44□□□□□ -2.02
SUMO3P55854 AC006001.4-201ENST00000622243 395 ntBASIC2.44□□□□□ -2.02
SUMO3P55854 U6.115-201ENST00000636045 103 ntBASIC2.44□□□□□ -2.02
SUMO3P55854 AL159152.1-201ENST00000635019 2587 ntBASIC2.44□□□□□ -2.02
SUMO3P55854 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
SUMO3P55854 snoU2_19.2-201ENST00000363024 80 ntBASIC2.43□□□□□ -2.02
SUMO3P55854 RNA5SP493-201ENST00000364115 91 ntBASIC2.43□□□□□ -2.02
SUMO3P55854 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.43□□□□□ -2.02
SUMO3P55854 Y_RNA.512-201ENST00000384518 102 ntBASIC2.43□□□□□ -2.02
SUMO3P55854 RNU4-30P-201ENST00000410245 143 ntBASIC2.43□□□□□ -2.02
SUMO3P55854 RNA5SP270-201ENST00000411361 118 ntBASIC2.43□□□□□ -2.02
SUMO3P55854 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.43□□□□□ -2.02
SUMO3P55854 RPL21P38-201ENST00000418090 167 ntBASIC2.43□□□□□ -2.02
SUMO3P55854 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC2.43□□□□□ -2.02
SUMO3P55854 AC060773.1-201ENST00000421698 310 ntBASIC2.43□□□□□ -2.02
SUMO3P55854 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.43□□□□□ -2.02
SUMO3P55854 AC010598.1-201ENST00000510378 103 ntBASIC2.43□□□□□ -2.02
SUMO3P55854 RNU6-496P-201ENST00000516145 99 ntBASIC2.43□□□□□ -2.02
SUMO3P55854 RNU6-155P-201ENST00000516347 100 ntBASIC2.43□□□□□ -2.02
SUMO3P55854 RNA5SP282-201ENST00000516355 108 ntBASIC2.43□□□□□ -2.02
SUMO3P55854 AC079600.2-201ENST00000550076 130 ntBASIC2.43□□□□□ -2.02
SUMO3P55854 EIF4BP1-201ENST00000554881 351 ntBASIC2.43□□□□□ -2.02
SUMO3P55854 MIR4635-201ENST00000583759 79 ntBASIC2.43□□□□□ -2.02
SUMO3P55854 AC005828.6-201ENST00000606610 232 ntBASIC2.43□□□□□ -2.02
SUMO3P55854 U6.104-201ENST00000637979 90 ntBASIC2.43□□□□□ -2.02
SUMO3P55854 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
SUMO3P55854 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
SUMO3P55854 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.42□□□□□ -2.02
SUMO3P55854 RNU1-58P-201ENST00000362413 163 ntBASIC2.42□□□□□ -2.02
SUMO3P55854 SNORD114-7-201ENST00000362520 77 ntBASIC2.42□□□□□ -2.02
SUMO3P55854 RNU4-90P-201ENST00000362773 141 ntBASIC2.42□□□□□ -2.02
SUMO3P55854 SNORD115-3-201ENST00000363100 82 ntBASIC2.42□□□□□ -2.02
SUMO3P55854 RNU1-112P-201ENST00000364401 164 ntBASIC2.42□□□□□ -2.02
SUMO3P55854 RNU6-463P-201ENST00000384340 107 ntBASIC2.42□□□□□ -2.02
SUMO3P55854 HMGN2P39-201ENST00000398005 273 ntBASIC2.42□□□□□ -2.02
SUMO3P55854 Y_RNA.602-201ENST00000410535 92 ntBASIC2.42□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 123.6 ms