Protein–RNA interactions for Protein: P49765

VEGFB, Vascular endothelial growth factor B, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFBP49765 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
VEGFBP49765 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.12□□□□□ -1.75
VEGFBP49765 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
VEGFBP49765 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
VEGFBP49765 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
VEGFBP49765 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
VEGFBP49765 SNORA63D-201ENST00000364359 132 ntBASIC4.12□□□□□ -1.75
VEGFBP49765 Y_RNA.437-201ENST00000384113 113 ntBASIC4.12□□□□□ -1.75
VEGFBP49765 MIR548B-201ENST00000385247 97 ntBASIC4.12□□□□□ -1.75
VEGFBP49765 SNORD96B-201ENST00000386148 79 ntBASIC4.12□□□□□ -1.75
VEGFBP49765 MT-TI-201ENST00000387365 69 ntBASIC4.12□□□□□ -1.75
VEGFBP49765 AL117342.1-201ENST00000404861 406 ntBASIC4.12□□□□□ -1.75
VEGFBP49765 RPL36AP10-201ENST00000421785 322 ntBASIC4.12□□□□□ -1.75
VEGFBP49765 AC018634.1-201ENST00000437554 401 ntBASIC4.12□□□□□ -1.75
VEGFBP49765 SNORD11-201ENST00000459124 84 ntBASIC4.12□□□□□ -1.75
VEGFBP49765 RPL23AP67-201ENST00000465341 474 ntBASIC4.12□□□□□ -1.75
VEGFBP49765 RPS26P48-201ENST00000491713 339 ntBASIC4.12□□□□□ -1.75
VEGFBP49765 AIG1P1-201ENST00000503376 148 ntBASIC4.12□□□□□ -1.75
VEGFBP49765 AC011406.1-201ENST00000512440 370 ntBASIC4.12□□□□□ -1.75
VEGFBP49765 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC4.12□□□□□ -1.75
VEGFBP49765 RNU1-61P-201ENST00000516107 151 ntBASIC4.12□□□□□ -1.75
VEGFBP49765 SCARNA15-202ENST00000516881 127 ntBASIC4.12□□□□□ -1.75
VEGFBP49765 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC4.12□□□□□ -1.75
VEGFBP49765 MIR4662B-201ENST00000579498 81 ntBASIC4.12□□□□□ -1.75
VEGFBP49765 AF117829.1-206ENST00000621883 3802 ntBASIC4.12□□□□□ -1.75
VEGFBP49765 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
VEGFBP49765 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
VEGFBP49765 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC4.12□□□□□ -1.75
VEGFBP49765 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.12□□□□□ -1.75
VEGFBP49765 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.12□□□□□ -1.75
VEGFBP49765 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.12□□□□□ -1.75
VEGFBP49765 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
VEGFBP49765 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
VEGFBP49765 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
VEGFBP49765 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
VEGFBP49765 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC4.11□□□□□ -1.75
VEGFBP49765 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
VEGFBP49765 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
VEGFBP49765 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
VEGFBP49765 DEFB131E-201ENST00000532329 154 ntBASIC4.11□□□□□ -1.75
VEGFBP49765 AC018692.3-201ENST00000623929 123 ntBASIC4.11□□□□□ -1.75
VEGFBP49765 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
VEGFBP49765 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
VEGFBP49765 Z83843.1-201ENST00000604070 3685 ntBASIC4.11□□□□□ -1.75
VEGFBP49765 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC4.11□□□□□ -1.75
VEGFBP49765 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
VEGFBP49765 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
VEGFBP49765 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.1□□□□□ -1.75
VEGFBP49765 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
VEGFBP49765 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
VEGFBP49765 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.1□□□□□ -1.75
VEGFBP49765 RNY3P2-201ENST00000362918 102 ntBASIC4.1□□□□□ -1.75
VEGFBP49765 RNU6-414P-201ENST00000363705 104 ntBASIC4.1□□□□□ -1.75
VEGFBP49765 RNU4-36P-201ENST00000364294 144 ntBASIC4.1□□□□□ -1.75
VEGFBP49765 MIR562-201ENST00000384894 95 ntBASIC4.1□□□□□ -1.75
VEGFBP49765 AL355796.1-201ENST00000406706 323 ntBASIC4.1□□□□□ -1.75
VEGFBP49765 Y_RNA.601-201ENST00000410500 113 ntBASIC4.1□□□□□ -1.75
VEGFBP49765 RPS26P55-201ENST00000471178 356 ntBASIC4.1□□□□□ -1.75
VEGFBP49765 AC083906.5-201ENST00000503722 328 ntBASIC4.1□□□□□ -1.75
VEGFBP49765 RNU1-117P-201ENST00000517041 158 ntBASIC4.1□□□□□ -1.75
VEGFBP49765 EIF4A1P12-201ENST00000551910 141 ntBASIC4.1□□□□□ -1.75
VEGFBP49765 HMGN2P15-201ENST00000585707 270 ntBASIC4.1□□□□□ -1.75
VEGFBP49765 AL162726.3-218ENST00000636401 95 ntBASIC4.1□□□□□ -1.75
VEGFBP49765 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
VEGFBP49765 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
VEGFBP49765 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.1□□□□□ -1.75
VEGFBP49765 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
VEGFBP49765 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
VEGFBP49765 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.1□□□□□ -1.75
VEGFBP49765 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.09□□□□□ -1.75
VEGFBP49765 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
VEGFBP49765 AC139713.2-215ENST00000641428 5037 ntBASIC4.09□□□□□ -1.75
VEGFBP49765 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.09□□□□□ -1.75
VEGFBP49765 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.09□□□□□ -1.75
VEGFBP49765 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
VEGFBP49765 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC4.09□□□□□ -1.75
VEGFBP49765 SNORD115-13-201ENST00000363358 82 ntBASIC4.09□□□□□ -1.75
VEGFBP49765 SNORD115-16-201ENST00000363887 82 ntBASIC4.09□□□□□ -1.75
VEGFBP49765 Y_RNA.265-201ENST00000364677 108 ntBASIC4.09□□□□□ -1.75
VEGFBP49765 SNORD115-1-201ENST00000364961 82 ntBASIC4.09□□□□□ -1.75
VEGFBP49765 RNA5SP239-201ENST00000410218 129 ntBASIC4.09□□□□□ -1.75
VEGFBP49765 snoU13.28-201ENST00000459235 104 ntBASIC4.09□□□□□ -1.75
VEGFBP49765 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC4.09□□□□□ -1.75
VEGFBP49765 RPL30P14-201ENST00000482744 348 ntBASIC4.09□□□□□ -1.75
VEGFBP49765 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC4.09□□□□□ -1.75
VEGFBP49765 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.09□□□□□ -1.75
VEGFBP49765 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
VEGFBP49765 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
VEGFBP49765 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
VEGFBP49765 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.08□□□□□ -1.76
VEGFBP49765 SNORA27.1-201ENST00000362604 124 ntBASIC4.08□□□□□ -1.76
VEGFBP49765 RNU6-219P-201ENST00000364728 107 ntBASIC4.08□□□□□ -1.76
VEGFBP49765 SNORA1-201ENST00000384107 130 ntBASIC4.08□□□□□ -1.76
VEGFBP49765 MIR548D2-201ENST00000384955 97 ntBASIC4.08□□□□□ -1.76
VEGFBP49765 MIR1185-2-201ENST00000408687 86 ntBASIC4.08□□□□□ -1.76
VEGFBP49765 RNU4-47P-201ENST00000410876 114 ntBASIC4.08□□□□□ -1.76
VEGFBP49765 EIF4EP4-201ENST00000424916 578 ntBASIC4.08□□□□□ -1.76
VEGFBP49765 AC027124.2-201ENST00000428249 105 ntBASIC4.08□□□□□ -1.76
VEGFBP49765 AC097462.1-201ENST00000514125 324 ntBASIC4.08□□□□□ -1.76
VEGFBP49765 RNA5SP356-201ENST00000515972 94 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms