Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.1□□□□□ -2.07
CACNA1FO60840 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.09□□□□□ -2.07
CACNA1FO60840 AL391987.6-201ENST00000305671 199 ntBASIC2.09□□□□□ -2.07
CACNA1FO60840 RNU6-770P-201ENST00000363929 105 ntBASIC2.09□□□□□ -2.07
CACNA1FO60840 Y_RNA.447-201ENST00000384184 113 ntBASIC2.09□□□□□ -2.07
CACNA1FO60840 AL512844.2-201ENST00000433990 593 ntBASIC2.09□□□□□ -2.07
CACNA1FO60840 RPL30P10-201ENST00000488148 337 ntBASIC2.09□□□□□ -2.07
CACNA1FO60840 RPL23AP63-201ENST00000498752 471 ntBASIC2.09□□□□□ -2.07
CACNA1FO60840 RNU6-408P-201ENST00000515910 100 ntBASIC2.09□□□□□ -2.07
CACNA1FO60840 SCARNA3-201ENST00000517097 143 ntBASIC2.09□□□□□ -2.07
CACNA1FO60840 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.09□□□□□ -2.07
CACNA1FO60840 AC021739.1-201ENST00000559631 174 ntBASIC2.09□□□□□ -2.07
CACNA1FO60840 MIR8062-201ENST00000621515 85 ntBASIC2.09□□□□□ -2.07
CACNA1FO60840 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.09□□□□□ -2.07
CACNA1FO60840 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.09□□□□□ -2.08
CACNA1FO60840 Z75746.1-201ENST00000440243 2080 ntBASIC2.09□□□□□ -2.08
CACNA1FO60840 RNU6-1141P-201ENST00000364520 107 ntBASIC2.09□□□□□ -2.08
CACNA1FO60840 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.09□□□□□ -2.08
CACNA1FO60840 AC138623.1-201ENST00000418060 216 ntBASIC2.09□□□□□ -2.08
CACNA1FO60840 AC244670.1-201ENST00000436879 112 ntBASIC2.09□□□□□ -2.08
CACNA1FO60840 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.09□□□□□ -2.08
CACNA1FO60840 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.09□□□□□ -2.08
CACNA1FO60840 SNRPGP7-201ENST00000469016 106 ntBASIC2.09□□□□□ -2.08
CACNA1FO60840 RN7SKP49-201ENST00000516675 260 ntBASIC2.09□□□□□ -2.08
CACNA1FO60840 MIR5571-201ENST00000577998 113 ntBASIC2.09□□□□□ -2.08
CACNA1FO60840 BX248123.2-201ENST00000606318 124 ntBASIC2.09□□□□□ -2.08
CACNA1FO60840 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.09□□□□□ -2.08
CACNA1FO60840 SNORD115-8-201ENST00000363856 82 ntBASIC2.08□□□□□ -2.08
CACNA1FO60840 RNU4-13P-201ENST00000364019 141 ntBASIC2.08□□□□□ -2.08
CACNA1FO60840 SNORA16.1-201ENST00000364597 132 ntBASIC2.08□□□□□ -2.08
CACNA1FO60840 RNU4-56P-201ENST00000364700 142 ntBASIC2.08□□□□□ -2.08
CACNA1FO60840 SNORD115-38-201ENST00000365037 82 ntBASIC2.08□□□□□ -2.08
CACNA1FO60840 Y_RNA.526-201ENST00000384572 110 ntBASIC2.08□□□□□ -2.08
CACNA1FO60840 SNORD78.2-201ENST00000391076 69 ntBASIC2.08□□□□□ -2.08
CACNA1FO60840 AC108667.1-201ENST00000428618 249 ntBASIC2.08□□□□□ -2.08
CACNA1FO60840 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.08□□□□□ -2.08
CACNA1FO60840 AL139109.1-201ENST00000455491 297 ntBASIC2.08□□□□□ -2.08
CACNA1FO60840 AC006026.2-201ENST00000457376 180 ntBASIC2.08□□□□□ -2.08
CACNA1FO60840 U8.22-201ENST00000459141 133 ntBASIC2.08□□□□□ -2.08
CACNA1FO60840 SNORA31.16-201ENST00000516773 139 ntBASIC2.08□□□□□ -2.08
CACNA1FO60840 SCARNA24.2-201ENST00000516968 130 ntBASIC2.08□□□□□ -2.08
CACNA1FO60840 Y_RNA.713-201ENST00000517013 96 ntBASIC2.08□□□□□ -2.08
CACNA1FO60840 AC027288.2-201ENST00000553028 243 ntBASIC2.08□□□□□ -2.08
CACNA1FO60840 MIR5694-201ENST00000581190 76 ntBASIC2.08□□□□□ -2.08
CACNA1FO60840 MIR4303-201ENST00000581299 66 ntBASIC2.08□□□□□ -2.08
CACNA1FO60840 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.08□□□□□ -2.08
CACNA1FO60840 MIR3117-201ENST00000584034 78 ntBASIC2.08□□□□□ -2.08
CACNA1FO60840 AP001282.2-201ENST00000616149 309 ntBASIC2.08□□□□□ -2.08
CACNA1FO60840 MIR6134-201ENST00000617606 109 ntBASIC2.08□□□□□ -2.08
CACNA1FO60840 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
CACNA1FO60840 AP000560.1-201ENST00000624150 1937 ntBASIC2.08□□□□□ -2.08
CACNA1FO60840 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2.08□□□□□ -2.08
CACNA1FO60840 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
CACNA1FO60840 Y_RNA.19-201ENST00000362462 99 ntBASIC2.07□□□□□ -2.08
CACNA1FO60840 SNORD27-201ENST00000363981 72 ntBASIC2.07□□□□□ -2.08
CACNA1FO60840 Y_RNA.462-201ENST00000384268 102 ntBASIC2.07□□□□□ -2.08
CACNA1FO60840 Y_RNA.476-201ENST00000384347 108 ntBASIC2.07□□□□□ -2.08
CACNA1FO60840 RNU6-748P-201ENST00000384648 107 ntBASIC2.07□□□□□ -2.08
CACNA1FO60840 MIR144-201ENST00000384886 86 ntBASIC2.07□□□□□ -2.08
CACNA1FO60840 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
CACNA1FO60840 RNU2-38P-201ENST00000410856 79 ntBASIC2.07□□□□□ -2.08
CACNA1FO60840 TRBVB-201ENST00000477100 408 ntBASIC2.07□□□□□ -2.08
CACNA1FO60840 RNU6-1012P-201ENST00000516606 109 ntBASIC2.07□□□□□ -2.08
CACNA1FO60840 RNU6-567P-201ENST00000516746 107 ntBASIC2.07□□□□□ -2.08
CACNA1FO60840 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.07□□□□□ -2.08
CACNA1FO60840 MIR4498-201ENST00000577599 66 ntBASIC2.07□□□□□ -2.08
CACNA1FO60840 AL390123.1-201ENST00000603216 237 ntBASIC2.07□□□□□ -2.08
CACNA1FO60840 HAUS6P2-201ENST00000433254 2404 ntBASIC2.07□□□□□ -2.08
CACNA1FO60840 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
CACNA1FO60840 MIR335-201ENST00000362173 94 ntBASIC2.07□□□□□ -2.08
CACNA1FO60840 RNU6-457P-201ENST00000363999 107 ntBASIC2.07□□□□□ -2.08
CACNA1FO60840 RNA5SP190-201ENST00000365222 118 ntBASIC2.07□□□□□ -2.08
CACNA1FO60840 Y_RNA.405-201ENST00000383979 100 ntBASIC2.07□□□□□ -2.08
CACNA1FO60840 Y_RNA.451-201ENST00000384200 100 ntBASIC2.07□□□□□ -2.08
CACNA1FO60840 Y_RNA.524-201ENST00000384564 100 ntBASIC2.07□□□□□ -2.08
CACNA1FO60840 Y_RNA.561-201ENST00000384694 100 ntBASIC2.07□□□□□ -2.08
CACNA1FO60840 EIF1P2-201ENST00000428233 350 ntBASIC2.07□□□□□ -2.08
CACNA1FO60840 MTND5P15-201ENST00000434246 349 ntBASIC2.07□□□□□ -2.08
CACNA1FO60840 AC007969.2-201ENST00000441891 191 ntBASIC2.07□□□□□ -2.08
CACNA1FO60840 AP001025.1-201ENST00000486139 332 ntBASIC2.07□□□□□ -2.08
CACNA1FO60840 AC067942.3-201ENST00000512025 362 ntBASIC2.07□□□□□ -2.08
CACNA1FO60840 RNU6-1198P-201ENST00000516904 67 ntBASIC2.07□□□□□ -2.08
CACNA1FO60840 DNAJC19P9-201ENST00000555084 351 ntBASIC2.07□□□□□ -2.08
CACNA1FO60840 AC073410.2-201ENST00000603240 332 ntBASIC2.07□□□□□ -2.08
CACNA1FO60840 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
CACNA1FO60840 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
CACNA1FO60840 RNU6-1301P-201ENST00000362724 104 ntBASIC2.06□□□□□ -2.08
CACNA1FO60840 RNU1-76P-201ENST00000362903 159 ntBASIC2.06□□□□□ -2.08
CACNA1FO60840 Y_RNA.84-201ENST00000363011 104 ntBASIC2.06□□□□□ -2.08
CACNA1FO60840 SNORD48-201ENST00000364953 64 ntBASIC2.06□□□□□ -2.08
CACNA1FO60840 Y_RNA.376-201ENST00000365638 108 ntBASIC2.06□□□□□ -2.08
CACNA1FO60840 SNORA29-201ENST00000384183 140 ntBASIC2.06□□□□□ -2.08
CACNA1FO60840 RNU6-19P-201ENST00000384718 107 ntBASIC2.06□□□□□ -2.08
CACNA1FO60840 SNORA53-201ENST00000391141 249 ntBASIC2.06□□□□□ -2.08
CACNA1FO60840 AC009414.1-201ENST00000427200 443 ntBASIC2.06□□□□□ -2.08
CACNA1FO60840 RNU6-1338P-201ENST00000516328 91 ntBASIC2.06□□□□□ -2.08
CACNA1FO60840 RNU5B-3P-201ENST00000516601 115 ntBASIC2.06□□□□□ -2.08
CACNA1FO60840 ACA59.2-201ENST00000517061 156 ntBASIC2.06□□□□□ -2.08
CACNA1FO60840 SCARNA11.3-201ENST00000517276 130 ntBASIC2.06□□□□□ -2.08
CACNA1FO60840 AC034114.1-201ENST00000520293 285 ntBASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms