Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
KCNIP3Q9Y2W7 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
KCNIP3Q9Y2W7 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.13
KCNIP3Q9Y2W7 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
KCNIP3Q9Y2W7 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
KCNIP3Q9Y2W7 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC15.83■□□□□ 0.13
KCNIP3Q9Y2W7 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
KCNIP3Q9Y2W7 AC104417.2-201ENST00000562989 1793 ntBASIC15.83■□□□□ 0.12
KCNIP3Q9Y2W7 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC15.83■□□□□ 0.12
KCNIP3Q9Y2W7 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
KCNIP3Q9Y2W7 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
KCNIP3Q9Y2W7 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
KCNIP3Q9Y2W7 BET1L-204ENST00000410108 637 ntTSL 3 BASIC15.83■□□□□ 0.12
KCNIP3Q9Y2W7 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC15.83■□□□□ 0.12
KCNIP3Q9Y2W7 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC15.83■□□□□ 0.12
KCNIP3Q9Y2W7 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC15.83■□□□□ 0.12
KCNIP3Q9Y2W7 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
KCNIP3Q9Y2W7 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC15.83■□□□□ 0.12
KCNIP3Q9Y2W7 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
KCNIP3Q9Y2W7 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.12
KCNIP3Q9Y2W7 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
KCNIP3Q9Y2W7 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
KCNIP3Q9Y2W7 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
KCNIP3Q9Y2W7 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
KCNIP3Q9Y2W7 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
KCNIP3Q9Y2W7 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
KCNIP3Q9Y2W7 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC15.83■□□□□ 0.12
KCNIP3Q9Y2W7 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC15.83■□□□□ 0.12
KCNIP3Q9Y2W7 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
KCNIP3Q9Y2W7 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC15.83■□□□□ 0.12
KCNIP3Q9Y2W7 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
KCNIP3Q9Y2W7 ANO7L1-203ENST00000602586 1720 ntBASIC15.82■□□□□ 0.12
KCNIP3Q9Y2W7 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
KCNIP3Q9Y2W7 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
KCNIP3Q9Y2W7 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC15.82■□□□□ 0.12
KCNIP3Q9Y2W7 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
KCNIP3Q9Y2W7 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
KCNIP3Q9Y2W7 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
KCNIP3Q9Y2W7 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
KCNIP3Q9Y2W7 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC15.82■□□□□ 0.12
KCNIP3Q9Y2W7 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
KCNIP3Q9Y2W7 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
KCNIP3Q9Y2W7 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
KCNIP3Q9Y2W7 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
KCNIP3Q9Y2W7 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC15.82■□□□□ 0.12
KCNIP3Q9Y2W7 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
KCNIP3Q9Y2W7 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC15.82■□□□□ 0.12
KCNIP3Q9Y2W7 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
KCNIP3Q9Y2W7 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
KCNIP3Q9Y2W7 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
KCNIP3Q9Y2W7 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
KCNIP3Q9Y2W7 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC15.82■□□□□ 0.12
KCNIP3Q9Y2W7 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC15.82■□□□□ 0.12
KCNIP3Q9Y2W7 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
KCNIP3Q9Y2W7 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
KCNIP3Q9Y2W7 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
KCNIP3Q9Y2W7 MKRN4P-201ENST00000444706 1521 ntBASIC15.82■□□□□ 0.12
KCNIP3Q9Y2W7 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
KCNIP3Q9Y2W7 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
KCNIP3Q9Y2W7 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
KCNIP3Q9Y2W7 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
KCNIP3Q9Y2W7 SDHAP1-207ENST00000440850 2000 ntBASIC15.82■□□□□ 0.12
KCNIP3Q9Y2W7 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
KCNIP3Q9Y2W7 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
KCNIP3Q9Y2W7 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
KCNIP3Q9Y2W7 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
KCNIP3Q9Y2W7 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC15.82■□□□□ 0.12
KCNIP3Q9Y2W7 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
KCNIP3Q9Y2W7 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
KCNIP3Q9Y2W7 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
KCNIP3Q9Y2W7 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC15.81■□□□□ 0.12
KCNIP3Q9Y2W7 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
KCNIP3Q9Y2W7 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
KCNIP3Q9Y2W7 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
KCNIP3Q9Y2W7 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
KCNIP3Q9Y2W7 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
KCNIP3Q9Y2W7 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
KCNIP3Q9Y2W7 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
KCNIP3Q9Y2W7 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
KCNIP3Q9Y2W7 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
KCNIP3Q9Y2W7 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
KCNIP3Q9Y2W7 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
KCNIP3Q9Y2W7 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC15.81■□□□□ 0.12
KCNIP3Q9Y2W7 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
KCNIP3Q9Y2W7 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
KCNIP3Q9Y2W7 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
KCNIP3Q9Y2W7 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC15.81■□□□□ 0.12
KCNIP3Q9Y2W7 MADD-208ENST00000405573 1823 ntTSL 5 BASIC15.81■□□□□ 0.12
KCNIP3Q9Y2W7 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
KCNIP3Q9Y2W7 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC15.81■□□□□ 0.12
KCNIP3Q9Y2W7 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
KCNIP3Q9Y2W7 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
KCNIP3Q9Y2W7 NME1-207ENST00000480143 964 ntTSL 2 BASIC15.81■□□□□ 0.12
KCNIP3Q9Y2W7 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
KCNIP3Q9Y2W7 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
KCNIP3Q9Y2W7 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC15.81■□□□□ 0.12
KCNIP3Q9Y2W7 AC068338.2-201ENST00000563278 1430 ntBASIC15.81■□□□□ 0.12
KCNIP3Q9Y2W7 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC15.81■□□□□ 0.12
KCNIP3Q9Y2W7 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC15.81■□□□□ 0.12
KCNIP3Q9Y2W7 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms