Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC28.16■■■□□ 2.1
SHANK2Q9UPX8 TK1-205ENST00000590862 642 ntTSL 3 BASIC28.16■■■□□ 2.1
SHANK2Q9UPX8 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
SHANK2Q9UPX8 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC28.16■■■□□ 2.1
SHANK2Q9UPX8 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC28.16■■■□□ 2.1
SHANK2Q9UPX8 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC28.16■■■□□ 2.1
SHANK2Q9UPX8 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC28.16■■■□□ 2.1
SHANK2Q9UPX8 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
SHANK2Q9UPX8 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
SHANK2Q9UPX8 POLI-202ENST00000406285 2030 ntTSL 2 BASIC28.15■■■□□ 2.1
SHANK2Q9UPX8 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC28.15■■■□□ 2.1
SHANK2Q9UPX8 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC28.15■■■□□ 2.1
SHANK2Q9UPX8 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
SHANK2Q9UPX8 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC28.15■■■□□ 2.1
SHANK2Q9UPX8 PRR29-207ENST00000580752 458 ntTSL 3 BASIC28.15■■■□□ 2.1
SHANK2Q9UPX8 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC28.15■■■□□ 2.1
SHANK2Q9UPX8 LITAF-220ENST00000620789 692 ntTSL 5 BASIC28.15■■■□□ 2.1
SHANK2Q9UPX8 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC28.15■■■□□ 2.1
SHANK2Q9UPX8 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
SHANK2Q9UPX8 KRT8P10-201ENST00000450021 1447 ntBASIC28.15■■■□□ 2.1
SHANK2Q9UPX8 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC28.15■■■□□ 2.1
SHANK2Q9UPX8 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC28.15■■■□□ 2.1
SHANK2Q9UPX8 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC28.15■■■□□ 2.1
SHANK2Q9UPX8 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
SHANK2Q9UPX8 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC28.15■■■□□ 2.1
SHANK2Q9UPX8 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC28.15■■■□□ 2.1
SHANK2Q9UPX8 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC28.15■■■□□ 2.1
SHANK2Q9UPX8 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
SHANK2Q9UPX8 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
SHANK2Q9UPX8 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
SHANK2Q9UPX8 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC28.15■■■□□ 2.1
SHANK2Q9UPX8 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
SHANK2Q9UPX8 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC28.15■■■□□ 2.1
SHANK2Q9UPX8 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC28.15■■■□□ 2.1
SHANK2Q9UPX8 BX276092.5-203ENST00000456199 560 ntBASIC28.15■■■□□ 2.1
SHANK2Q9UPX8 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC28.15■■■□□ 2.1
SHANK2Q9UPX8 TPSP2-201ENST00000561760 610 ntBASIC28.15■■■□□ 2.1
SHANK2Q9UPX8 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC28.15■■■□□ 2.1
SHANK2Q9UPX8 TEN1-204ENST00000588202 862 ntTSL 3 BASIC28.15■■■□□ 2.1
SHANK2Q9UPX8 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
SHANK2Q9UPX8 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
SHANK2Q9UPX8 FEM1AP3-201ENST00000403722 1741 ntBASIC28.14■■■□□ 2.1
SHANK2Q9UPX8 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC28.14■■■□□ 2.1
SHANK2Q9UPX8 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC28.14■■■□□ 2.1
SHANK2Q9UPX8 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
SHANK2Q9UPX8 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC28.14■■■□□ 2.1
SHANK2Q9UPX8 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
SHANK2Q9UPX8 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
SHANK2Q9UPX8 KRT17P6-201ENST00000453795 1220 ntBASIC28.14■■■□□ 2.09
SHANK2Q9UPX8 RNF126P1-202ENST00000569893 925 ntBASIC28.14■■■□□ 2.09
SHANK2Q9UPX8 AC068587.9-201ENST00000641814 219 ntBASIC28.14■■■□□ 2.09
SHANK2Q9UPX8 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC28.14■■■□□ 2.09
SHANK2Q9UPX8 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
SHANK2Q9UPX8 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC28.13■■■□□ 2.09
SHANK2Q9UPX8 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC28.13■■■□□ 2.09
SHANK2Q9UPX8 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
SHANK2Q9UPX8 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC28.13■■■□□ 2.09
SHANK2Q9UPX8 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC28.13■■■□□ 2.09
SHANK2Q9UPX8 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC28.13■■■□□ 2.09
SHANK2Q9UPX8 MIR3180-4-201ENST00000582223 153 ntBASIC28.13■■■□□ 2.09
SHANK2Q9UPX8 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC28.13■■■□□ 2.09
SHANK2Q9UPX8 FP475955.4-201ENST00000623131 1990 ntBASIC28.13■■■□□ 2.09
SHANK2Q9UPX8 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC28.12■■■□□ 2.09
SHANK2Q9UPX8 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
SHANK2Q9UPX8 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
SHANK2Q9UPX8 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
SHANK2Q9UPX8 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC28.12■■■□□ 2.09
SHANK2Q9UPX8 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC28.12■■■□□ 2.09
SHANK2Q9UPX8 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
SHANK2Q9UPX8 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC28.12■■■□□ 2.09
SHANK2Q9UPX8 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC28.12■■■□□ 2.09
SHANK2Q9UPX8 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC28.12■■■□□ 2.09
SHANK2Q9UPX8 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC28.12■■■□□ 2.09
SHANK2Q9UPX8 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
SHANK2Q9UPX8 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC28.11■■■□□ 2.09
SHANK2Q9UPX8 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
SHANK2Q9UPX8 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
SHANK2Q9UPX8 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
SHANK2Q9UPX8 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC28.11■■■□□ 2.09
SHANK2Q9UPX8 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
SHANK2Q9UPX8 SKP2-204ENST00000508514 821 ntTSL 3 BASIC28.11■■■□□ 2.09
SHANK2Q9UPX8 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC28.11■■■□□ 2.09
SHANK2Q9UPX8 CIB2-208ENST00000560618 804 ntTSL 2 BASIC28.11■■■□□ 2.09
SHANK2Q9UPX8 NAT14-202ENST00000587400 416 ntTSL 5 BASIC28.11■■■□□ 2.09
SHANK2Q9UPX8 AP002414.4-201ENST00000589764 1148 ntBASIC28.11■■■□□ 2.09
SHANK2Q9UPX8 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC28.11■■■□□ 2.09
SHANK2Q9UPX8 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC28.11■■■□□ 2.09
SHANK2Q9UPX8 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC28.11■■■□□ 2.09
SHANK2Q9UPX8 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
SHANK2Q9UPX8 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
SHANK2Q9UPX8 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
SHANK2Q9UPX8 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
SHANK2Q9UPX8 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC28.11■■■□□ 2.09
SHANK2Q9UPX8 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
SHANK2Q9UPX8 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC28.1■■■□□ 2.09
SHANK2Q9UPX8 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC28.1■■■□□ 2.09
SHANK2Q9UPX8 BAALC-202ENST00000306391 243 ntTSL 5 BASIC28.1■■■□□ 2.09
SHANK2Q9UPX8 BAALC-204ENST00000330955 222 ntTSL 5 BASIC28.1■■■□□ 2.09
SHANK2Q9UPX8 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC28.1■■■□□ 2.09
SHANK2Q9UPX8 DRAXINP1-201ENST00000437611 948 ntBASIC28.1■■■□□ 2.09
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms