Protein–RNA interactions for Protein: Q9UMD9

COL17A1, Collagen alpha-1(XVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1Q9UMD9 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC28.67■■■□□ 2.18
COL17A1Q9UMD9 AC104109.2-201ENST00000602919 1418 ntBASIC28.67■■■□□ 2.18
COL17A1Q9UMD9 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
COL17A1Q9UMD9 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
COL17A1Q9UMD9 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC28.67■■■□□ 2.18
COL17A1Q9UMD9 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC28.67■■■□□ 2.18
COL17A1Q9UMD9 BID-203ENST00000399765 1879 ntTSL 2 BASIC28.67■■■□□ 2.18
COL17A1Q9UMD9 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC28.67■■■□□ 2.18
COL17A1Q9UMD9 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC28.66■■■□□ 2.18
COL17A1Q9UMD9 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
COL17A1Q9UMD9 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC28.66■■■□□ 2.18
COL17A1Q9UMD9 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
COL17A1Q9UMD9 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
COL17A1Q9UMD9 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC28.66■■■□□ 2.18
COL17A1Q9UMD9 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC28.66■■■□□ 2.18
COL17A1Q9UMD9 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
COL17A1Q9UMD9 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
COL17A1Q9UMD9 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC28.66■■■□□ 2.18
COL17A1Q9UMD9 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
COL17A1Q9UMD9 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
COL17A1Q9UMD9 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC28.66■■■□□ 2.18
COL17A1Q9UMD9 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC28.66■■■□□ 2.18
COL17A1Q9UMD9 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
COL17A1Q9UMD9 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC28.66■■■□□ 2.18
COL17A1Q9UMD9 DNAJB3-202ENST00000449667 1266 ntBASIC28.66■■■□□ 2.18
COL17A1Q9UMD9 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC28.66■■■□□ 2.18
COL17A1Q9UMD9 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC28.66■■■□□ 2.18
COL17A1Q9UMD9 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC28.66■■■□□ 2.18
COL17A1Q9UMD9 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC28.66■■■□□ 2.18
COL17A1Q9UMD9 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
COL17A1Q9UMD9 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC28.66■■■□□ 2.18
COL17A1Q9UMD9 AC124864.1-201ENST00000623408 392 ntBASIC28.66■■■□□ 2.18
COL17A1Q9UMD9 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC28.65■■■□□ 2.18
COL17A1Q9UMD9 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC28.65■■■□□ 2.18
COL17A1Q9UMD9 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
COL17A1Q9UMD9 MED15P5-201ENST00000423150 992 ntBASIC28.65■■■□□ 2.18
COL17A1Q9UMD9 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC28.65■■■□□ 2.18
COL17A1Q9UMD9 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC28.65■■■□□ 2.18
COL17A1Q9UMD9 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC28.65■■■□□ 2.18
COL17A1Q9UMD9 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC28.65■■■□□ 2.18
COL17A1Q9UMD9 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC28.65■■■□□ 2.18
COL17A1Q9UMD9 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC28.65■■■□□ 2.18
COL17A1Q9UMD9 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC28.65■■■□□ 2.18
COL17A1Q9UMD9 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC28.65■■■□□ 2.18
COL17A1Q9UMD9 SMG8-203ENST00000578922 2178 ntBASIC28.65■■■□□ 2.18
COL17A1Q9UMD9 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
COL17A1Q9UMD9 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
COL17A1Q9UMD9 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
COL17A1Q9UMD9 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC28.64■■■□□ 2.18
COL17A1Q9UMD9 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC28.64■■■□□ 2.18
COL17A1Q9UMD9 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC28.64■■■□□ 2.18
COL17A1Q9UMD9 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC28.64■■■□□ 2.18
COL17A1Q9UMD9 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.17
COL17A1Q9UMD9 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC28.64■■■□□ 2.17
COL17A1Q9UMD9 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.17
COL17A1Q9UMD9 LBH-203ENST00000404397 543 ntTSL 4 BASIC28.64■■■□□ 2.17
COL17A1Q9UMD9 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC28.64■■■□□ 2.17
COL17A1Q9UMD9 CYMP-203ENST00000474680 1263 ntBASIC28.64■■■□□ 2.17
COL17A1Q9UMD9 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC28.64■■■□□ 2.17
COL17A1Q9UMD9 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC28.64■■■□□ 2.17
COL17A1Q9UMD9 AL355877.3-201ENST00000622820 899 ntBASIC28.64■■■□□ 2.17
COL17A1Q9UMD9 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC28.64■■■□□ 2.17
COL17A1Q9UMD9 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC28.64■■■□□ 2.17
COL17A1Q9UMD9 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC28.64■■■□□ 2.17
COL17A1Q9UMD9 AC092720.2-201ENST00000602388 1665 ntBASIC28.64■■■□□ 2.17
COL17A1Q9UMD9 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC28.63■■■□□ 2.17
COL17A1Q9UMD9 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
COL17A1Q9UMD9 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
COL17A1Q9UMD9 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
COL17A1Q9UMD9 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC28.63■■■□□ 2.17
COL17A1Q9UMD9 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC28.63■■■□□ 2.17
COL17A1Q9UMD9 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC28.63■■■□□ 2.17
COL17A1Q9UMD9 IGHGP-201ENST00000390555 1178 ntBASIC28.63■■■□□ 2.17
COL17A1Q9UMD9 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC28.63■■■□□ 2.17
COL17A1Q9UMD9 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
COL17A1Q9UMD9 FGFR3P6-201ENST00000457012 610 ntBASIC28.63■■■□□ 2.17
COL17A1Q9UMD9 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC28.63■■■□□ 2.17
COL17A1Q9UMD9 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC28.63■■■□□ 2.17
COL17A1Q9UMD9 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
COL17A1Q9UMD9 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC28.63■■■□□ 2.17
COL17A1Q9UMD9 AC007375.3-201ENST00000600936 2314 ntBASIC28.63■■■□□ 2.17
COL17A1Q9UMD9 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC28.63■■■□□ 2.17
COL17A1Q9UMD9 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC28.62■■■□□ 2.17
COL17A1Q9UMD9 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
COL17A1Q9UMD9 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
COL17A1Q9UMD9 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC28.62■■■□□ 2.17
COL17A1Q9UMD9 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC28.62■■■□□ 2.17
COL17A1Q9UMD9 AL035633.1-201ENST00000406139 838 ntBASIC28.62■■■□□ 2.17
COL17A1Q9UMD9 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC28.62■■■□□ 2.17
COL17A1Q9UMD9 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
COL17A1Q9UMD9 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC28.62■■■□□ 2.17
COL17A1Q9UMD9 TEN1-204ENST00000588202 862 ntTSL 3 BASIC28.62■■■□□ 2.17
COL17A1Q9UMD9 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC28.62■■■□□ 2.17
COL17A1Q9UMD9 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC28.62■■■□□ 2.17
COL17A1Q9UMD9 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC28.62■■■□□ 2.17
COL17A1Q9UMD9 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
COL17A1Q9UMD9 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC28.62■■■□□ 2.17
COL17A1Q9UMD9 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
COL17A1Q9UMD9 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
COL17A1Q9UMD9 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms