Protein–RNA interactions for Protein: Q9P003

CNIH4, Protein cornichon homolog 4, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4Q9P003 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CNIH4Q9P003 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CNIH4Q9P003 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CNIH4Q9P003 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CNIH4Q9P003 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CNIH4Q9P003 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CNIH4Q9P003 MESTP1-201ENST00000404287 994 ntBASIC17.7■□□□□ 0.42
CNIH4Q9P003 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CNIH4Q9P003 AC011506.1-201ENST00000474329 610 ntBASIC17.7■□□□□ 0.42
CNIH4Q9P003 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CNIH4Q9P003 RPS20-210ENST00000523936 899 ntTSL 2 BASIC17.7■□□□□ 0.42
CNIH4Q9P003 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.7■□□□□ 0.42
CNIH4Q9P003 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17.7■□□□□ 0.42
CNIH4Q9P003 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC17.7■□□□□ 0.42
CNIH4Q9P003 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.7■□□□□ 0.42
CNIH4Q9P003 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CNIH4Q9P003 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CNIH4Q9P003 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.7■□□□□ 0.42
CNIH4Q9P003 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CNIH4Q9P003 NEFHP1-201ENST00000412845 2629 ntBASIC17.7■□□□□ 0.42
CNIH4Q9P003 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CNIH4Q9P003 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CNIH4Q9P003 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CNIH4Q9P003 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC17.7■□□□□ 0.42
CNIH4Q9P003 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.7■□□□□ 0.42
CNIH4Q9P003 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC17.7■□□□□ 0.42
CNIH4Q9P003 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CNIH4Q9P003 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CNIH4Q9P003 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CNIH4Q9P003 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CNIH4Q9P003 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CNIH4Q9P003 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
CNIH4Q9P003 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CNIH4Q9P003 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CNIH4Q9P003 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CNIH4Q9P003 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CNIH4Q9P003 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC17.69■□□□□ 0.42
CNIH4Q9P003 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC17.69■□□□□ 0.42
CNIH4Q9P003 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.69■□□□□ 0.42
CNIH4Q9P003 Z85996.1-201ENST00000494644 937 ntBASIC17.69■□□□□ 0.42
CNIH4Q9P003 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC17.69■□□□□ 0.42
CNIH4Q9P003 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC17.69■□□□□ 0.42
CNIH4Q9P003 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.69■□□□□ 0.42
CNIH4Q9P003 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.69■□□□□ 0.42
CNIH4Q9P003 AC011298.2-201ENST00000617989 482 ntBASIC17.69■□□□□ 0.42
CNIH4Q9P003 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.69■□□□□ 0.42
CNIH4Q9P003 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.69■□□□□ 0.42
CNIH4Q9P003 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CNIH4Q9P003 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CNIH4Q9P003 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.69■□□□□ 0.42
CNIH4Q9P003 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CNIH4Q9P003 AC141586.3-201ENST00000562166 1838 ntBASIC17.69■□□□□ 0.42
CNIH4Q9P003 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CNIH4Q9P003 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CNIH4Q9P003 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CNIH4Q9P003 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CNIH4Q9P003 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CNIH4Q9P003 ZNF815P-204ENST00000434898 1737 ntBASIC17.69■□□□□ 0.42
CNIH4Q9P003 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.69■□□□□ 0.42
CNIH4Q9P003 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.69■□□□□ 0.42
CNIH4Q9P003 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC17.69■□□□□ 0.42
CNIH4Q9P003 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CNIH4Q9P003 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CNIH4Q9P003 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.69■□□□□ 0.42
CNIH4Q9P003 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
CNIH4Q9P003 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.69■□□□□ 0.42
CNIH4Q9P003 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.69■□□□□ 0.42
CNIH4Q9P003 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
CNIH4Q9P003 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CNIH4Q9P003 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC17.68■□□□□ 0.42
CNIH4Q9P003 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CNIH4Q9P003 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CNIH4Q9P003 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CNIH4Q9P003 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CNIH4Q9P003 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CNIH4Q9P003 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
CNIH4Q9P003 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.68■□□□□ 0.42
CNIH4Q9P003 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CNIH4Q9P003 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CNIH4Q9P003 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.68■□□□□ 0.42
CNIH4Q9P003 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.68■□□□□ 0.42
CNIH4Q9P003 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
CNIH4Q9P003 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.68■□□□□ 0.42
CNIH4Q9P003 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC17.68■□□□□ 0.42
CNIH4Q9P003 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC17.68■□□□□ 0.42
CNIH4Q9P003 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.68■□□□□ 0.42
CNIH4Q9P003 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CNIH4Q9P003 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC17.68■□□□□ 0.42
CNIH4Q9P003 AC079598.2-202ENST00000546624 1451 ntBASIC17.68■□□□□ 0.42
CNIH4Q9P003 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CNIH4Q9P003 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CNIH4Q9P003 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CNIH4Q9P003 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.67■□□□□ 0.42
CNIH4Q9P003 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CNIH4Q9P003 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CNIH4Q9P003 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CNIH4Q9P003 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CNIH4Q9P003 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CNIH4Q9P003 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CNIH4Q9P003 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms