Protein–RNA interactions for Protein: Q9NYA1

SPHK1, Sphingosine kinase 1, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1Q9NYA1 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC18.23■□□□□ 0.51
SPHK1Q9NYA1 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SPHK1Q9NYA1 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SPHK1Q9NYA1 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
SPHK1Q9NYA1 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SPHK1Q9NYA1 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
SPHK1Q9NYA1 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
SPHK1Q9NYA1 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
SPHK1Q9NYA1 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
SPHK1Q9NYA1 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SPHK1Q9NYA1 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SPHK1Q9NYA1 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC18.22■□□□□ 0.51
SPHK1Q9NYA1 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC18.22■□□□□ 0.51
SPHK1Q9NYA1 TK2-213ENST00000563369 882 ntTSL 5 BASIC18.22■□□□□ 0.51
SPHK1Q9NYA1 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
SPHK1Q9NYA1 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SPHK1Q9NYA1 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.22■□□□□ 0.51
SPHK1Q9NYA1 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SPHK1Q9NYA1 KRT8P45-201ENST00000414328 1447 ntBASIC18.22■□□□□ 0.51
SPHK1Q9NYA1 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
SPHK1Q9NYA1 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
SPHK1Q9NYA1 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
SPHK1Q9NYA1 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.21■□□□□ 0.51
SPHK1Q9NYA1 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SPHK1Q9NYA1 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.21■□□□□ 0.51
SPHK1Q9NYA1 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
SPHK1Q9NYA1 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
SPHK1Q9NYA1 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.21■□□□□ 0.51
SPHK1Q9NYA1 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SPHK1Q9NYA1 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SPHK1Q9NYA1 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SPHK1Q9NYA1 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.21■□□□□ 0.51
SPHK1Q9NYA1 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SPHK1Q9NYA1 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SPHK1Q9NYA1 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC18.21■□□□□ 0.51
SPHK1Q9NYA1 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC18.21■□□□□ 0.51
SPHK1Q9NYA1 LIN28AP1-201ENST00000429574 405 ntBASIC18.21■□□□□ 0.51
SPHK1Q9NYA1 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
SPHK1Q9NYA1 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
SPHK1Q9NYA1 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18.21■□□□□ 0.51
SPHK1Q9NYA1 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC18.21■□□□□ 0.51
SPHK1Q9NYA1 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.21■□□□□ 0.51
SPHK1Q9NYA1 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC18.21■□□□□ 0.51
SPHK1Q9NYA1 AC092865.7-201ENST00000641832 219 ntBASIC18.21■□□□□ 0.51
SPHK1Q9NYA1 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SPHK1Q9NYA1 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC18.21■□□□□ 0.51
SPHK1Q9NYA1 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SPHK1Q9NYA1 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
SPHK1Q9NYA1 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.21■□□□□ 0.51
SPHK1Q9NYA1 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.21■□□□□ 0.51
SPHK1Q9NYA1 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SPHK1Q9NYA1 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
SPHK1Q9NYA1 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
SPHK1Q9NYA1 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18.21■□□□□ 0.5
SPHK1Q9NYA1 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SPHK1Q9NYA1 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SPHK1Q9NYA1 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SPHK1Q9NYA1 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SPHK1Q9NYA1 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.2■□□□□ 0.5
SPHK1Q9NYA1 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
SPHK1Q9NYA1 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.2■□□□□ 0.5
SPHK1Q9NYA1 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SPHK1Q9NYA1 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SPHK1Q9NYA1 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SPHK1Q9NYA1 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC18.2■□□□□ 0.5
SPHK1Q9NYA1 AL023284.2-201ENST00000405850 579 ntBASIC18.2■□□□□ 0.5
SPHK1Q9NYA1 TMPOP1-202ENST00000424642 1267 ntBASIC18.2■□□□□ 0.5
SPHK1Q9NYA1 ATP5G1P1-201ENST00000448724 379 ntBASIC18.2■□□□□ 0.5
SPHK1Q9NYA1 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC18.2■□□□□ 0.5
SPHK1Q9NYA1 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC18.2■□□□□ 0.5
SPHK1Q9NYA1 AL138966.2-201ENST00000621997 464 ntBASIC18.2■□□□□ 0.5
SPHK1Q9NYA1 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC18.2■□□□□ 0.5
SPHK1Q9NYA1 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
SPHK1Q9NYA1 AL512353.2-201ENST00000448759 1962 ntBASIC18.2■□□□□ 0.5
SPHK1Q9NYA1 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
SPHK1Q9NYA1 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
SPHK1Q9NYA1 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.2■□□□□ 0.5
SPHK1Q9NYA1 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
SPHK1Q9NYA1 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.2■□□□□ 0.5
SPHK1Q9NYA1 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SPHK1Q9NYA1 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.2■□□□□ 0.5
SPHK1Q9NYA1 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SPHK1Q9NYA1 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
SPHK1Q9NYA1 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SPHK1Q9NYA1 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
SPHK1Q9NYA1 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
SPHK1Q9NYA1 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
SPHK1Q9NYA1 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SPHK1Q9NYA1 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SPHK1Q9NYA1 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SPHK1Q9NYA1 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.19■□□□□ 0.5
SPHK1Q9NYA1 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
SPHK1Q9NYA1 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SPHK1Q9NYA1 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SPHK1Q9NYA1 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SPHK1Q9NYA1 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SPHK1Q9NYA1 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SPHK1Q9NYA1 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC18.19■□□□□ 0.5
SPHK1Q9NYA1 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SPHK1Q9NYA1 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms