Protein–RNA interactions for Protein: Q9NXG2

THUMPD1, THUMP domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1Q9NXG2 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC17.82■□□□□ 0.44
THUMPD1Q9NXG2 AC083906.6-201ENST00000641366 219 ntBASIC17.82■□□□□ 0.44
THUMPD1Q9NXG2 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
THUMPD1Q9NXG2 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
THUMPD1Q9NXG2 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
THUMPD1Q9NXG2 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
THUMPD1Q9NXG2 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
THUMPD1Q9NXG2 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.82■□□□□ 0.44
THUMPD1Q9NXG2 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
THUMPD1Q9NXG2 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
THUMPD1Q9NXG2 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.82■□□□□ 0.44
THUMPD1Q9NXG2 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
THUMPD1Q9NXG2 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.82■□□□□ 0.44
THUMPD1Q9NXG2 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
THUMPD1Q9NXG2 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.81■□□□□ 0.44
THUMPD1Q9NXG2 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.81■□□□□ 0.44
THUMPD1Q9NXG2 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
THUMPD1Q9NXG2 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
THUMPD1Q9NXG2 AL512353.2-201ENST00000448759 1962 ntBASIC17.81■□□□□ 0.44
THUMPD1Q9NXG2 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
THUMPD1Q9NXG2 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
THUMPD1Q9NXG2 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
THUMPD1Q9NXG2 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
THUMPD1Q9NXG2 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
THUMPD1Q9NXG2 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC17.81■□□□□ 0.44
THUMPD1Q9NXG2 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC17.81■□□□□ 0.44
THUMPD1Q9NXG2 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.81■□□□□ 0.44
THUMPD1Q9NXG2 F2R-202ENST00000505600 442 ntTSL 2 BASIC17.81■□□□□ 0.44
THUMPD1Q9NXG2 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC17.81■□□□□ 0.44
THUMPD1Q9NXG2 AP003097.1-201ENST00000530657 1135 ntBASIC17.81■□□□□ 0.44
THUMPD1Q9NXG2 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
THUMPD1Q9NXG2 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
THUMPD1Q9NXG2 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC17.81■□□□□ 0.44
THUMPD1Q9NXG2 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
THUMPD1Q9NXG2 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC17.81■□□□□ 0.44
THUMPD1Q9NXG2 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
THUMPD1Q9NXG2 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
THUMPD1Q9NXG2 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
THUMPD1Q9NXG2 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.81■□□□□ 0.44
THUMPD1Q9NXG2 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
THUMPD1Q9NXG2 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
THUMPD1Q9NXG2 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
THUMPD1Q9NXG2 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
THUMPD1Q9NXG2 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
THUMPD1Q9NXG2 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.81■□□□□ 0.44
THUMPD1Q9NXG2 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.81■□□□□ 0.44
THUMPD1Q9NXG2 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
THUMPD1Q9NXG2 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.81■□□□□ 0.44
THUMPD1Q9NXG2 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.8■□□□□ 0.44
THUMPD1Q9NXG2 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
THUMPD1Q9NXG2 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
THUMPD1Q9NXG2 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
THUMPD1Q9NXG2 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
THUMPD1Q9NXG2 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
THUMPD1Q9NXG2 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
THUMPD1Q9NXG2 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
THUMPD1Q9NXG2 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
THUMPD1Q9NXG2 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
THUMPD1Q9NXG2 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
THUMPD1Q9NXG2 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
THUMPD1Q9NXG2 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
THUMPD1Q9NXG2 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
THUMPD1Q9NXG2 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC17.8■□□□□ 0.44
THUMPD1Q9NXG2 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC17.8■□□□□ 0.44
THUMPD1Q9NXG2 AC090192.1-201ENST00000517740 490 ntBASIC17.8■□□□□ 0.44
THUMPD1Q9NXG2 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC17.8■□□□□ 0.44
THUMPD1Q9NXG2 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.8■□□□□ 0.44
THUMPD1Q9NXG2 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
THUMPD1Q9NXG2 HLA-A-209ENST00000638375 975 ntBASIC17.8■□□□□ 0.44
THUMPD1Q9NXG2 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.8■□□□□ 0.44
THUMPD1Q9NXG2 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
THUMPD1Q9NXG2 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
THUMPD1Q9NXG2 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.8■□□□□ 0.44
THUMPD1Q9NXG2 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
THUMPD1Q9NXG2 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
THUMPD1Q9NXG2 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.79■□□□□ 0.44
THUMPD1Q9NXG2 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
THUMPD1Q9NXG2 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC17.79■□□□□ 0.44
THUMPD1Q9NXG2 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
THUMPD1Q9NXG2 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
THUMPD1Q9NXG2 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
THUMPD1Q9NXG2 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
THUMPD1Q9NXG2 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
THUMPD1Q9NXG2 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
THUMPD1Q9NXG2 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.79■□□□□ 0.44
THUMPD1Q9NXG2 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC17.79■□□□□ 0.44
THUMPD1Q9NXG2 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.79■□□□□ 0.44
THUMPD1Q9NXG2 AC008403.3-201ENST00000598924 454 ntBASIC17.79■□□□□ 0.44
THUMPD1Q9NXG2 MTDHP1-201ENST00000605323 784 ntBASIC17.79■□□□□ 0.44
THUMPD1Q9NXG2 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC17.79■□□□□ 0.44
THUMPD1Q9NXG2 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
THUMPD1Q9NXG2 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
THUMPD1Q9NXG2 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.79■□□□□ 0.44
THUMPD1Q9NXG2 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
THUMPD1Q9NXG2 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.79■□□□□ 0.44
THUMPD1Q9NXG2 BICD1-207ENST00000551848 1962 ntBASIC17.79■□□□□ 0.44
THUMPD1Q9NXG2 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.79■□□□□ 0.44
THUMPD1Q9NXG2 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
THUMPD1Q9NXG2 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
THUMPD1Q9NXG2 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms