Protein–RNA interactions for Protein: Q9NRQ5

SMCO4, Single-pass membrane and coiled-coil domain-containing protein 4, humanhuman

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4Q9NRQ5 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
SMCO4Q9NRQ5 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
SMCO4Q9NRQ5 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SMCO4Q9NRQ5 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SMCO4Q9NRQ5 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
SMCO4Q9NRQ5 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SMCO4Q9NRQ5 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SMCO4Q9NRQ5 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SMCO4Q9NRQ5 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SMCO4Q9NRQ5 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SMCO4Q9NRQ5 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
SMCO4Q9NRQ5 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SMCO4Q9NRQ5 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SMCO4Q9NRQ5 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SMCO4Q9NRQ5 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
SMCO4Q9NRQ5 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SMCO4Q9NRQ5 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SMCO4Q9NRQ5 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SMCO4Q9NRQ5 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
SMCO4Q9NRQ5 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SMCO4Q9NRQ5 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC14.89□□□□□ -0.03
SMCO4Q9NRQ5 GTSE1-AS1-202ENST00000623117 1518 ntBASIC14.89□□□□□ -0.03
SMCO4Q9NRQ5 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SMCO4Q9NRQ5 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SMCO4Q9NRQ5 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SMCO4Q9NRQ5 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SMCO4Q9NRQ5 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SMCO4Q9NRQ5 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SMCO4Q9NRQ5 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC14.89□□□□□ -0.03
SMCO4Q9NRQ5 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC14.89□□□□□ -0.03
SMCO4Q9NRQ5 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SMCO4Q9NRQ5 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC14.89□□□□□ -0.03
SMCO4Q9NRQ5 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SMCO4Q9NRQ5 AP001271.2-201ENST00000624018 1556 ntBASIC14.89□□□□□ -0.03
SMCO4Q9NRQ5 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
SMCO4Q9NRQ5 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SMCO4Q9NRQ5 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
SMCO4Q9NRQ5 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SMCO4Q9NRQ5 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
SMCO4Q9NRQ5 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SMCO4Q9NRQ5 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC14.89□□□□□ -0.03
SMCO4Q9NRQ5 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
SMCO4Q9NRQ5 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SMCO4Q9NRQ5 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
SMCO4Q9NRQ5 FLJ38576-201ENST00000623820 2459 ntBASIC14.88□□□□□ -0.03
SMCO4Q9NRQ5 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
SMCO4Q9NRQ5 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SMCO4Q9NRQ5 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC14.88□□□□□ -0.03
SMCO4Q9NRQ5 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC14.88□□□□□ -0.03
SMCO4Q9NRQ5 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC14.88□□□□□ -0.03
SMCO4Q9NRQ5 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SMCO4Q9NRQ5 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
SMCO4Q9NRQ5 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SMCO4Q9NRQ5 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC14.88□□□□□ -0.03
SMCO4Q9NRQ5 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SMCO4Q9NRQ5 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC14.88□□□□□ -0.03
SMCO4Q9NRQ5 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC14.88□□□□□ -0.03
SMCO4Q9NRQ5 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC14.88□□□□□ -0.03
SMCO4Q9NRQ5 AC129492.7-201ENST00000622992 756 ntBASIC14.88□□□□□ -0.03
SMCO4Q9NRQ5 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
SMCO4Q9NRQ5 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SMCO4Q9NRQ5 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SMCO4Q9NRQ5 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SMCO4Q9NRQ5 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SMCO4Q9NRQ5 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SMCO4Q9NRQ5 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SMCO4Q9NRQ5 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
SMCO4Q9NRQ5 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SMCO4Q9NRQ5 AL121761.2-201ENST00000598007 1648 ntBASIC14.88□□□□□ -0.03
SMCO4Q9NRQ5 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SMCO4Q9NRQ5 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SMCO4Q9NRQ5 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SMCO4Q9NRQ5 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SMCO4Q9NRQ5 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
SMCO4Q9NRQ5 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC14.87□□□□□ -0.03
SMCO4Q9NRQ5 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SMCO4Q9NRQ5 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC14.87□□□□□ -0.03
SMCO4Q9NRQ5 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC14.87□□□□□ -0.03
SMCO4Q9NRQ5 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SMCO4Q9NRQ5 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SMCO4Q9NRQ5 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SMCO4Q9NRQ5 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SMCO4Q9NRQ5 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC14.87□□□□□ -0.03
SMCO4Q9NRQ5 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC14.87□□□□□ -0.03
SMCO4Q9NRQ5 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SMCO4Q9NRQ5 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
SMCO4Q9NRQ5 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC14.87□□□□□ -0.03
SMCO4Q9NRQ5 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC14.87□□□□□ -0.03
SMCO4Q9NRQ5 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
SMCO4Q9NRQ5 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC14.87□□□□□ -0.03
SMCO4Q9NRQ5 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC14.87□□□□□ -0.03
SMCO4Q9NRQ5 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
SMCO4Q9NRQ5 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SMCO4Q9NRQ5 IRX1P1-201ENST00000438849 1838 ntBASIC14.87□□□□□ -0.03
SMCO4Q9NRQ5 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
SMCO4Q9NRQ5 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SMCO4Q9NRQ5 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SMCO4Q9NRQ5 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
SMCO4Q9NRQ5 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC14.87□□□□□ -0.03
SMCO4Q9NRQ5 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms