Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PDLIM7Q9NR12 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PDLIM7Q9NR12 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC21.2■□□□□ 0.99
PDLIM7Q9NR12 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
PDLIM7Q9NR12 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
PDLIM7Q9NR12 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC21.2■□□□□ 0.99
PDLIM7Q9NR12 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PDLIM7Q9NR12 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
PDLIM7Q9NR12 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PDLIM7Q9NR12 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PDLIM7Q9NR12 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC21.2■□□□□ 0.98
PDLIM7Q9NR12 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC21.2■□□□□ 0.98
PDLIM7Q9NR12 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC21.2■□□□□ 0.98
PDLIM7Q9NR12 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC21.2■□□□□ 0.98
PDLIM7Q9NR12 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC21.2■□□□□ 0.98
PDLIM7Q9NR12 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC21.2■□□□□ 0.98
PDLIM7Q9NR12 AC006538.3-201ENST00000612495 578 ntBASIC21.2■□□□□ 0.98
PDLIM7Q9NR12 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PDLIM7Q9NR12 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC21.2■□□□□ 0.98
PDLIM7Q9NR12 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PDLIM7Q9NR12 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC21.2■□□□□ 0.98
PDLIM7Q9NR12 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PDLIM7Q9NR12 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PDLIM7Q9NR12 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PDLIM7Q9NR12 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC21.19■□□□□ 0.98
PDLIM7Q9NR12 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC21.19■□□□□ 0.98
PDLIM7Q9NR12 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PDLIM7Q9NR12 TEX21P-204ENST00000641479 1693 ntBASIC21.19■□□□□ 0.98
PDLIM7Q9NR12 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
PDLIM7Q9NR12 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PDLIM7Q9NR12 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PDLIM7Q9NR12 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
PDLIM7Q9NR12 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PDLIM7Q9NR12 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
PDLIM7Q9NR12 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
PDLIM7Q9NR12 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
PDLIM7Q9NR12 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
PDLIM7Q9NR12 TSSC2-201ENST00000450217 709 ntBASIC21.19■□□□□ 0.98
PDLIM7Q9NR12 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
PDLIM7Q9NR12 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC21.19■□□□□ 0.98
PDLIM7Q9NR12 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC21.19■□□□□ 0.98
PDLIM7Q9NR12 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PDLIM7Q9NR12 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
PDLIM7Q9NR12 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
PDLIM7Q9NR12 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PDLIM7Q9NR12 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
PDLIM7Q9NR12 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PDLIM7Q9NR12 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC21.19■□□□□ 0.98
PDLIM7Q9NR12 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PDLIM7Q9NR12 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC21.18■□□□□ 0.98
PDLIM7Q9NR12 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PDLIM7Q9NR12 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC21.18■□□□□ 0.98
PDLIM7Q9NR12 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PDLIM7Q9NR12 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
PDLIM7Q9NR12 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC21.18■□□□□ 0.98
PDLIM7Q9NR12 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PDLIM7Q9NR12 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PDLIM7Q9NR12 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PDLIM7Q9NR12 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PDLIM7Q9NR12 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
PDLIM7Q9NR12 PPIH-202ENST00000372549 327 ntTSL 3 BASIC21.18■□□□□ 0.98
PDLIM7Q9NR12 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PDLIM7Q9NR12 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC21.18■□□□□ 0.98
PDLIM7Q9NR12 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC21.18■□□□□ 0.98
PDLIM7Q9NR12 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC21.18■□□□□ 0.98
PDLIM7Q9NR12 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
PDLIM7Q9NR12 AC004263.2-201ENST00000617183 678 ntBASIC21.18■□□□□ 0.98
PDLIM7Q9NR12 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC21.18■□□□□ 0.98
PDLIM7Q9NR12 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC21.18■□□□□ 0.98
PDLIM7Q9NR12 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PDLIM7Q9NR12 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PDLIM7Q9NR12 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
PDLIM7Q9NR12 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
PDLIM7Q9NR12 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
PDLIM7Q9NR12 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC21.17■□□□□ 0.98
PDLIM7Q9NR12 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PDLIM7Q9NR12 AC093484.2-201ENST00000580996 2166 ntBASIC21.17■□□□□ 0.98
PDLIM7Q9NR12 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
PDLIM7Q9NR12 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC21.17■□□□□ 0.98
PDLIM7Q9NR12 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PDLIM7Q9NR12 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PDLIM7Q9NR12 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
PDLIM7Q9NR12 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC21.17■□□□□ 0.98
PDLIM7Q9NR12 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
PDLIM7Q9NR12 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PDLIM7Q9NR12 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
PDLIM7Q9NR12 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC21.17■□□□□ 0.98
PDLIM7Q9NR12 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
PDLIM7Q9NR12 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC21.17■□□□□ 0.98
PDLIM7Q9NR12 GAS2L1P1-201ENST00000420145 1480 ntBASIC21.17■□□□□ 0.98
PDLIM7Q9NR12 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC21.17■□□□□ 0.98
PDLIM7Q9NR12 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PDLIM7Q9NR12 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
PDLIM7Q9NR12 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PDLIM7Q9NR12 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC21.17■□□□□ 0.98
PDLIM7Q9NR12 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC21.16■□□□□ 0.98
PDLIM7Q9NR12 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC21.16■□□□□ 0.98
PDLIM7Q9NR12 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
PDLIM7Q9NR12 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
PDLIM7Q9NR12 GOLGA6L5P-202ENST00000515341 1828 ntBASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms