Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ZFYVE28Q9HCC9 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
ZFYVE28Q9HCC9 KRT18P23-201ENST00000435622 1283 ntBASIC21.62■■□□□ 1.05
ZFYVE28Q9HCC9 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
ZFYVE28Q9HCC9 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC21.62■■□□□ 1.05
ZFYVE28Q9HCC9 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC21.62■■□□□ 1.05
ZFYVE28Q9HCC9 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC21.62■■□□□ 1.05
ZFYVE28Q9HCC9 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC21.62■■□□□ 1.05
ZFYVE28Q9HCC9 AC010240.3-201ENST00000607688 395 ntBASIC21.62■■□□□ 1.05
ZFYVE28Q9HCC9 REXO1L6P-202ENST00000619970 1078 ntBASIC21.62■■□□□ 1.05
ZFYVE28Q9HCC9 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ZFYVE28Q9HCC9 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
ZFYVE28Q9HCC9 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ZFYVE28Q9HCC9 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ZFYVE28Q9HCC9 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
ZFYVE28Q9HCC9 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC21.61■■□□□ 1.05
ZFYVE28Q9HCC9 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
ZFYVE28Q9HCC9 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
ZFYVE28Q9HCC9 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
ZFYVE28Q9HCC9 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
ZFYVE28Q9HCC9 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.61■■□□□ 1.05
ZFYVE28Q9HCC9 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
ZFYVE28Q9HCC9 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC21.61■■□□□ 1.05
ZFYVE28Q9HCC9 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ZFYVE28Q9HCC9 GAS2L1P1-201ENST00000420145 1480 ntBASIC21.61■■□□□ 1.05
ZFYVE28Q9HCC9 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
ZFYVE28Q9HCC9 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
ZFYVE28Q9HCC9 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC21.61■■□□□ 1.05
ZFYVE28Q9HCC9 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC21.61■■□□□ 1.05
ZFYVE28Q9HCC9 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC21.61■■□□□ 1.05
ZFYVE28Q9HCC9 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC21.61■■□□□ 1.05
ZFYVE28Q9HCC9 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC21.61■■□□□ 1.05
ZFYVE28Q9HCC9 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ZFYVE28Q9HCC9 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
ZFYVE28Q9HCC9 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC21.61■■□□□ 1.05
ZFYVE28Q9HCC9 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC21.61■■□□□ 1.05
ZFYVE28Q9HCC9 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC21.61■■□□□ 1.05
ZFYVE28Q9HCC9 DET1-207ENST00000564406 2315 ntTSL 2 BASIC21.61■■□□□ 1.05
ZFYVE28Q9HCC9 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
ZFYVE28Q9HCC9 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.6■■□□□ 1.05
ZFYVE28Q9HCC9 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
ZFYVE28Q9HCC9 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ZFYVE28Q9HCC9 GOLGA6L5P-202ENST00000515341 1828 ntBASIC21.6■■□□□ 1.05
ZFYVE28Q9HCC9 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ZFYVE28Q9HCC9 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ZFYVE28Q9HCC9 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ZFYVE28Q9HCC9 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC21.6■■□□□ 1.05
ZFYVE28Q9HCC9 TLE1-202ENST00000376484 666 ntTSL 3 BASIC21.6■■□□□ 1.05
ZFYVE28Q9HCC9 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC21.6■■□□□ 1.05
ZFYVE28Q9HCC9 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
ZFYVE28Q9HCC9 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC21.6■■□□□ 1.05
ZFYVE28Q9HCC9 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
ZFYVE28Q9HCC9 AF238378.1-201ENST00000526806 358 ntBASIC21.6■■□□□ 1.05
ZFYVE28Q9HCC9 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
ZFYVE28Q9HCC9 AC104390.1-201ENST00000555663 520 ntBASIC21.6■■□□□ 1.05
ZFYVE28Q9HCC9 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
ZFYVE28Q9HCC9 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC21.6■■□□□ 1.05
ZFYVE28Q9HCC9 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ZFYVE28Q9HCC9 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ZFYVE28Q9HCC9 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
ZFYVE28Q9HCC9 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ZFYVE28Q9HCC9 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
ZFYVE28Q9HCC9 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
ZFYVE28Q9HCC9 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ZFYVE28Q9HCC9 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
ZFYVE28Q9HCC9 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ZFYVE28Q9HCC9 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC21.59■■□□□ 1.05
ZFYVE28Q9HCC9 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ZFYVE28Q9HCC9 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ZFYVE28Q9HCC9 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
ZFYVE28Q9HCC9 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ZFYVE28Q9HCC9 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
ZFYVE28Q9HCC9 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ZFYVE28Q9HCC9 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ZFYVE28Q9HCC9 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
ZFYVE28Q9HCC9 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
ZFYVE28Q9HCC9 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
ZFYVE28Q9HCC9 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC21.59■■□□□ 1.05
ZFYVE28Q9HCC9 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC21.59■■□□□ 1.05
ZFYVE28Q9HCC9 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC21.59■■□□□ 1.05
ZFYVE28Q9HCC9 BET1L-206ENST00000486280 665 ntTSL 3 BASIC21.59■■□□□ 1.05
ZFYVE28Q9HCC9 GUSBP12-201ENST00000513727 720 ntBASIC21.59■■□□□ 1.05
ZFYVE28Q9HCC9 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC21.59■■□□□ 1.05
ZFYVE28Q9HCC9 MOK-208ENST00000519058 917 ntTSL 2 BASIC21.59■■□□□ 1.05
ZFYVE28Q9HCC9 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC21.59■■□□□ 1.05
ZFYVE28Q9HCC9 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC21.59■■□□□ 1.05
ZFYVE28Q9HCC9 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC21.59■■□□□ 1.05
ZFYVE28Q9HCC9 GPR32P1-201ENST00000601788 811 ntBASIC21.59■■□□□ 1.05
ZFYVE28Q9HCC9 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC21.59■■□□□ 1.05
ZFYVE28Q9HCC9 AL773604.1-201ENST00000617417 272 ntBASIC21.59■■□□□ 1.05
ZFYVE28Q9HCC9 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC21.59■■□□□ 1.05
ZFYVE28Q9HCC9 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
ZFYVE28Q9HCC9 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ZFYVE28Q9HCC9 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
ZFYVE28Q9HCC9 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
ZFYVE28Q9HCC9 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC21.58■■□□□ 1.05
ZFYVE28Q9HCC9 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
ZFYVE28Q9HCC9 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
ZFYVE28Q9HCC9 SDHAP1-207ENST00000440850 2000 ntBASIC21.58■■□□□ 1.05
ZFYVE28Q9HCC9 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC21.58■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms