Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
POLR2J3Q9H1A7 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
POLR2J3Q9H1A7 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.51■□□□□ 0.39
POLR2J3Q9H1A7 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC17.51■□□□□ 0.39
POLR2J3Q9H1A7 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
POLR2J3Q9H1A7 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
POLR2J3Q9H1A7 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
POLR2J3Q9H1A7 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
POLR2J3Q9H1A7 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
POLR2J3Q9H1A7 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
POLR2J3Q9H1A7 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
POLR2J3Q9H1A7 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
POLR2J3Q9H1A7 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC17.51■□□□□ 0.39
POLR2J3Q9H1A7 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
POLR2J3Q9H1A7 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
POLR2J3Q9H1A7 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC17.51■□□□□ 0.39
POLR2J3Q9H1A7 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
POLR2J3Q9H1A7 AL160286.2-201ENST00000567150 934 ntBASIC17.51■□□□□ 0.39
POLR2J3Q9H1A7 C1QL1P1-201ENST00000568105 661 ntBASIC17.51■□□□□ 0.39
POLR2J3Q9H1A7 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC17.51■□□□□ 0.39
POLR2J3Q9H1A7 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
POLR2J3Q9H1A7 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
POLR2J3Q9H1A7 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
POLR2J3Q9H1A7 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
POLR2J3Q9H1A7 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
POLR2J3Q9H1A7 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
POLR2J3Q9H1A7 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
POLR2J3Q9H1A7 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
POLR2J3Q9H1A7 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
POLR2J3Q9H1A7 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.51■□□□□ 0.39
POLR2J3Q9H1A7 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.51■□□□□ 0.39
POLR2J3Q9H1A7 NBPF21P-201ENST00000425093 1451 ntBASIC17.5■□□□□ 0.39
POLR2J3Q9H1A7 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
POLR2J3Q9H1A7 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
POLR2J3Q9H1A7 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
POLR2J3Q9H1A7 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
POLR2J3Q9H1A7 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
POLR2J3Q9H1A7 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
POLR2J3Q9H1A7 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
POLR2J3Q9H1A7 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
POLR2J3Q9H1A7 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
POLR2J3Q9H1A7 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
POLR2J3Q9H1A7 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
POLR2J3Q9H1A7 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
POLR2J3Q9H1A7 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
POLR2J3Q9H1A7 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC17.5■□□□□ 0.39
POLR2J3Q9H1A7 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
POLR2J3Q9H1A7 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC17.5■□□□□ 0.39
POLR2J3Q9H1A7 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC17.5■□□□□ 0.39
POLR2J3Q9H1A7 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
POLR2J3Q9H1A7 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
POLR2J3Q9H1A7 AC018470.1-201ENST00000624790 3129 ntBASIC17.5■□□□□ 0.39
POLR2J3Q9H1A7 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
POLR2J3Q9H1A7 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
POLR2J3Q9H1A7 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
POLR2J3Q9H1A7 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
POLR2J3Q9H1A7 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
POLR2J3Q9H1A7 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
POLR2J3Q9H1A7 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.5■□□□□ 0.39
POLR2J3Q9H1A7 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.49■□□□□ 0.39
POLR2J3Q9H1A7 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.49■□□□□ 0.39
POLR2J3Q9H1A7 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
POLR2J3Q9H1A7 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
POLR2J3Q9H1A7 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
POLR2J3Q9H1A7 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
POLR2J3Q9H1A7 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
POLR2J3Q9H1A7 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.49■□□□□ 0.39
POLR2J3Q9H1A7 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
POLR2J3Q9H1A7 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.49■□□□□ 0.39
POLR2J3Q9H1A7 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
POLR2J3Q9H1A7 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC17.49■□□□□ 0.39
POLR2J3Q9H1A7 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
POLR2J3Q9H1A7 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC17.49■□□□□ 0.39
POLR2J3Q9H1A7 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC17.49■□□□□ 0.39
POLR2J3Q9H1A7 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
POLR2J3Q9H1A7 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC17.49■□□□□ 0.39
POLR2J3Q9H1A7 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.49■□□□□ 0.39
POLR2J3Q9H1A7 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC17.49■□□□□ 0.39
POLR2J3Q9H1A7 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
POLR2J3Q9H1A7 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.49■□□□□ 0.39
POLR2J3Q9H1A7 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
POLR2J3Q9H1A7 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
POLR2J3Q9H1A7 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
POLR2J3Q9H1A7 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
POLR2J3Q9H1A7 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
POLR2J3Q9H1A7 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
POLR2J3Q9H1A7 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.48■□□□□ 0.39
POLR2J3Q9H1A7 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
POLR2J3Q9H1A7 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC17.48■□□□□ 0.39
POLR2J3Q9H1A7 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.48■□□□□ 0.39
POLR2J3Q9H1A7 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
POLR2J3Q9H1A7 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
POLR2J3Q9H1A7 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
POLR2J3Q9H1A7 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
POLR2J3Q9H1A7 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
POLR2J3Q9H1A7 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.48■□□□□ 0.39
POLR2J3Q9H1A7 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
POLR2J3Q9H1A7 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
POLR2J3Q9H1A7 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
POLR2J3Q9H1A7 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms