Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
RTFDC1Q9BY42 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RTFDC1Q9BY42 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC23.01■■□□□ 1.27
RTFDC1Q9BY42 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RTFDC1Q9BY42 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RTFDC1Q9BY42 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
RTFDC1Q9BY42 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC23■■□□□ 1.27
RTFDC1Q9BY42 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC23■■□□□ 1.27
RTFDC1Q9BY42 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
RTFDC1Q9BY42 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
RTFDC1Q9BY42 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
RTFDC1Q9BY42 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
RTFDC1Q9BY42 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
RTFDC1Q9BY42 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC23■■□□□ 1.27
RTFDC1Q9BY42 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC23■■□□□ 1.27
RTFDC1Q9BY42 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC23■■□□□ 1.27
RTFDC1Q9BY42 AC091304.2-201ENST00000564639 760 ntBASIC23■■□□□ 1.27
RTFDC1Q9BY42 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC23■■□□□ 1.27
RTFDC1Q9BY42 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC23■■□□□ 1.27
RTFDC1Q9BY42 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC23■■□□□ 1.27
RTFDC1Q9BY42 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
RTFDC1Q9BY42 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
RTFDC1Q9BY42 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC23■■□□□ 1.27
RTFDC1Q9BY42 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC23■■□□□ 1.27
RTFDC1Q9BY42 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
RTFDC1Q9BY42 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC22.99■■□□□ 1.27
RTFDC1Q9BY42 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.27
RTFDC1Q9BY42 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
RTFDC1Q9BY42 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
RTFDC1Q9BY42 BAALC-202ENST00000306391 243 ntTSL 5 BASIC22.99■■□□□ 1.27
RTFDC1Q9BY42 BAALC-204ENST00000330955 222 ntTSL 5 BASIC22.99■■□□□ 1.27
RTFDC1Q9BY42 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
RTFDC1Q9BY42 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC22.99■■□□□ 1.27
RTFDC1Q9BY42 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
RTFDC1Q9BY42 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC22.99■■□□□ 1.27
RTFDC1Q9BY42 LINC00265-3P-201ENST00000447588 903 ntBASIC22.99■■□□□ 1.27
RTFDC1Q9BY42 AC079781.3-201ENST00000449110 356 ntBASIC22.99■■□□□ 1.27
RTFDC1Q9BY42 AP000867.3-201ENST00000524675 377 ntBASIC22.99■■□□□ 1.27
RTFDC1Q9BY42 PNN-202ENST00000553331 656 ntTSL 3 BASIC22.99■■□□□ 1.27
RTFDC1Q9BY42 LITAF-220ENST00000620789 692 ntTSL 5 BASIC22.99■■□□□ 1.27
RTFDC1Q9BY42 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
RTFDC1Q9BY42 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
RTFDC1Q9BY42 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
RTFDC1Q9BY42 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC22.99■■□□□ 1.27
RTFDC1Q9BY42 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
RTFDC1Q9BY42 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC22.99■■□□□ 1.27
RTFDC1Q9BY42 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC22.99■■□□□ 1.27
RTFDC1Q9BY42 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC22.99■■□□□ 1.27
RTFDC1Q9BY42 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
RTFDC1Q9BY42 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
RTFDC1Q9BY42 KRT8P7-201ENST00000533003 1432 ntBASIC22.99■■□□□ 1.27
RTFDC1Q9BY42 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
RTFDC1Q9BY42 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
RTFDC1Q9BY42 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
RTFDC1Q9BY42 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
RTFDC1Q9BY42 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC22.98■■□□□ 1.27
RTFDC1Q9BY42 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC22.98■■□□□ 1.27
RTFDC1Q9BY42 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
RTFDC1Q9BY42 AL109659.2-201ENST00000606809 1674 ntBASIC22.98■■□□□ 1.27
RTFDC1Q9BY42 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
RTFDC1Q9BY42 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
RTFDC1Q9BY42 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
RTFDC1Q9BY42 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC22.98■■□□□ 1.27
RTFDC1Q9BY42 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC22.98■■□□□ 1.27
RTFDC1Q9BY42 KRT18P31-201ENST00000506277 1292 ntBASIC22.98■■□□□ 1.27
RTFDC1Q9BY42 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC22.98■■□□□ 1.27
RTFDC1Q9BY42 AC106795.1-205ENST00000512851 1056 ntBASIC22.98■■□□□ 1.27
RTFDC1Q9BY42 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
RTFDC1Q9BY42 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
RTFDC1Q9BY42 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC22.98■■□□□ 1.27
RTFDC1Q9BY42 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
RTFDC1Q9BY42 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC22.98■■□□□ 1.27
RTFDC1Q9BY42 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
RTFDC1Q9BY42 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
RTFDC1Q9BY42 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC22.97■■□□□ 1.27
RTFDC1Q9BY42 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC22.97■■□□□ 1.27
RTFDC1Q9BY42 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
RTFDC1Q9BY42 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
RTFDC1Q9BY42 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
RTFDC1Q9BY42 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
RTFDC1Q9BY42 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
RTFDC1Q9BY42 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
RTFDC1Q9BY42 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC22.97■■□□□ 1.27
RTFDC1Q9BY42 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
RTFDC1Q9BY42 TOB2P1-201ENST00000469761 992 ntBASIC22.97■■□□□ 1.27
RTFDC1Q9BY42 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC22.97■■□□□ 1.27
RTFDC1Q9BY42 AC104390.1-201ENST00000555663 520 ntBASIC22.97■■□□□ 1.27
RTFDC1Q9BY42 LINC01521-201ENST00000504184 1943 ntBASIC22.97■■□□□ 1.27
RTFDC1Q9BY42 HOXB1-202ENST00000577092 1414 ntBASIC22.97■■□□□ 1.27
RTFDC1Q9BY42 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
RTFDC1Q9BY42 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC22.97■■□□□ 1.27
RTFDC1Q9BY42 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC22.96■■□□□ 1.27
RTFDC1Q9BY42 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
RTFDC1Q9BY42 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
RTFDC1Q9BY42 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
RTFDC1Q9BY42 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC22.96■■□□□ 1.27
RTFDC1Q9BY42 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
RTFDC1Q9BY42 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC22.96■■□□□ 1.27
RTFDC1Q9BY42 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC22.96■■□□□ 1.27
RTFDC1Q9BY42 GXYLT1P4-201ENST00000613576 1192 ntBASIC22.96■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms