Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC15.92■□□□□ 0.14
FOXC2Q99958 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
FOXC2Q99958 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC15.92■□□□□ 0.14
FOXC2Q99958 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC15.92■□□□□ 0.14
FOXC2Q99958 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
FOXC2Q99958 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
FOXC2Q99958 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC15.92■□□□□ 0.14
FOXC2Q99958 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
FOXC2Q99958 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
FOXC2Q99958 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
FOXC2Q99958 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC15.92■□□□□ 0.14
FOXC2Q99958 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
FOXC2Q99958 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
FOXC2Q99958 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
FOXC2Q99958 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
FOXC2Q99958 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC15.91■□□□□ 0.14
FOXC2Q99958 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC15.91■□□□□ 0.14
FOXC2Q99958 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
FOXC2Q99958 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
FOXC2Q99958 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
FOXC2Q99958 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
FOXC2Q99958 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
FOXC2Q99958 PALM-208ENST00000592155 2272 ntTSL 4 BASIC15.91■□□□□ 0.14
FOXC2Q99958 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC15.91■□□□□ 0.14
FOXC2Q99958 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
FOXC2Q99958 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
FOXC2Q99958 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
FOXC2Q99958 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
FOXC2Q99958 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
FOXC2Q99958 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.91■□□□□ 0.14
FOXC2Q99958 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC15.91■□□□□ 0.14
FOXC2Q99958 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC15.91■□□□□ 0.14
FOXC2Q99958 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
FOXC2Q99958 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
FOXC2Q99958 AP001005.1-201ENST00000571755 1248 ntBASIC15.91■□□□□ 0.14
FOXC2Q99958 TK1-205ENST00000590862 642 ntTSL 3 BASIC15.91■□□□□ 0.14
FOXC2Q99958 AC138894.3-201ENST00000603787 634 ntBASIC15.91■□□□□ 0.14
FOXC2Q99958 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC15.91■□□□□ 0.14
FOXC2Q99958 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
FOXC2Q99958 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
FOXC2Q99958 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC15.91■□□□□ 0.14
FOXC2Q99958 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
FOXC2Q99958 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
FOXC2Q99958 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC15.91■□□□□ 0.14
FOXC2Q99958 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
FOXC2Q99958 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC15.91■□□□□ 0.14
FOXC2Q99958 AL391807.1-203ENST00000604392 2365 ntBASIC15.91■□□□□ 0.14
FOXC2Q99958 IL9RP2-201ENST00000423948 1312 ntBASIC15.91■□□□□ 0.14
FOXC2Q99958 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
FOXC2Q99958 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
FOXC2Q99958 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC15.91■□□□□ 0.14
FOXC2Q99958 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC15.9■□□□□ 0.14
FOXC2Q99958 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
FOXC2Q99958 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
FOXC2Q99958 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
FOXC2Q99958 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
FOXC2Q99958 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
FOXC2Q99958 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
FOXC2Q99958 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
FOXC2Q99958 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
FOXC2Q99958 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
FOXC2Q99958 TSPY12P-201ENST00000421279 868 ntBASIC15.9■□□□□ 0.14
FOXC2Q99958 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC15.9■□□□□ 0.14
FOXC2Q99958 KRT18P58-201ENST00000527480 1120 ntBASIC15.9■□□□□ 0.14
FOXC2Q99958 AC092865.5-201ENST00000545435 363 ntBASIC15.9■□□□□ 0.14
FOXC2Q99958 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
FOXC2Q99958 AC074051.2-201ENST00000565115 352 ntBASIC15.9■□□□□ 0.14
FOXC2Q99958 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
FOXC2Q99958 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC15.9■□□□□ 0.14
FOXC2Q99958 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC15.9■□□□□ 0.14
FOXC2Q99958 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC15.9■□□□□ 0.14
FOXC2Q99958 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
FOXC2Q99958 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC15.9■□□□□ 0.14
FOXC2Q99958 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
FOXC2Q99958 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
FOXC2Q99958 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
FOXC2Q99958 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
FOXC2Q99958 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
FOXC2Q99958 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
FOXC2Q99958 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
FOXC2Q99958 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
FOXC2Q99958 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
FOXC2Q99958 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC15.9■□□□□ 0.14
FOXC2Q99958 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC15.9■□□□□ 0.14
FOXC2Q99958 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
FOXC2Q99958 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
FOXC2Q99958 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC15.9■□□□□ 0.14
FOXC2Q99958 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.14
FOXC2Q99958 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
FOXC2Q99958 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC15.89■□□□□ 0.13
FOXC2Q99958 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
FOXC2Q99958 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
FOXC2Q99958 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
FOXC2Q99958 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC15.89■□□□□ 0.13
FOXC2Q99958 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
FOXC2Q99958 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
FOXC2Q99958 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
FOXC2Q99958 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC15.89■□□□□ 0.13
FOXC2Q99958 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
FOXC2Q99958 TLE1-202ENST00000376484 666 ntTSL 3 BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms