Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NPAS1Q99742 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NPAS1Q99742 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NPAS1Q99742 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.25■□□□□ 0.35
NPAS1Q99742 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
NPAS1Q99742 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NPAS1Q99742 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NPAS1Q99742 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NPAS1Q99742 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.25■□□□□ 0.35
NPAS1Q99742 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
NPAS1Q99742 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NPAS1Q99742 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.24■□□□□ 0.35
NPAS1Q99742 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.24■□□□□ 0.35
NPAS1Q99742 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NPAS1Q99742 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
NPAS1Q99742 FEM1AP3-201ENST00000403722 1741 ntBASIC17.24■□□□□ 0.35
NPAS1Q99742 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
NPAS1Q99742 AP000974.1-201ENST00000623909 2387 ntBASIC17.24■□□□□ 0.35
NPAS1Q99742 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NPAS1Q99742 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NPAS1Q99742 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NPAS1Q99742 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
NPAS1Q99742 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
NPAS1Q99742 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NPAS1Q99742 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
NPAS1Q99742 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC17.24■□□□□ 0.35
NPAS1Q99742 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC17.24■□□□□ 0.35
NPAS1Q99742 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NPAS1Q99742 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NPAS1Q99742 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC17.24■□□□□ 0.35
NPAS1Q99742 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NPAS1Q99742 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.24■□□□□ 0.35
NPAS1Q99742 AC005082.1-201ENST00000413042 2259 ntBASIC17.24■□□□□ 0.35
NPAS1Q99742 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC17.24■□□□□ 0.35
NPAS1Q99742 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
NPAS1Q99742 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
NPAS1Q99742 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
NPAS1Q99742 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NPAS1Q99742 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.23■□□□□ 0.35
NPAS1Q99742 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NPAS1Q99742 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NPAS1Q99742 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.23■□□□□ 0.35
NPAS1Q99742 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
NPAS1Q99742 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NPAS1Q99742 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NPAS1Q99742 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NPAS1Q99742 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.23■□□□□ 0.35
NPAS1Q99742 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.23■□□□□ 0.35
NPAS1Q99742 INGX-201ENST00000359239 846 ntBASIC17.23■□□□□ 0.35
NPAS1Q99742 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC17.23■□□□□ 0.35
NPAS1Q99742 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NPAS1Q99742 PRSS44-201ENST00000515154 1146 ntBASIC17.23■□□□□ 0.35
NPAS1Q99742 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC17.23■□□□□ 0.35
NPAS1Q99742 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.23■□□□□ 0.35
NPAS1Q99742 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC17.23■□□□□ 0.35
NPAS1Q99742 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NPAS1Q99742 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NPAS1Q99742 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
NPAS1Q99742 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NPAS1Q99742 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
NPAS1Q99742 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC17.23■□□□□ 0.35
NPAS1Q99742 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NPAS1Q99742 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NPAS1Q99742 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NPAS1Q99742 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.22■□□□□ 0.35
NPAS1Q99742 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
NPAS1Q99742 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NPAS1Q99742 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
NPAS1Q99742 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.22■□□□□ 0.35
NPAS1Q99742 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NPAS1Q99742 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.22■□□□□ 0.35
NPAS1Q99742 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.22■□□□□ 0.35
NPAS1Q99742 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
NPAS1Q99742 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
NPAS1Q99742 AC087499.1-201ENST00000418141 1075 ntBASIC17.22■□□□□ 0.35
NPAS1Q99742 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NPAS1Q99742 AP005242.2-201ENST00000580065 1175 ntBASIC17.22■□□□□ 0.35
NPAS1Q99742 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
NPAS1Q99742 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NPAS1Q99742 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NPAS1Q99742 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
NPAS1Q99742 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NPAS1Q99742 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
NPAS1Q99742 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NPAS1Q99742 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
NPAS1Q99742 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC17.21■□□□□ 0.35
NPAS1Q99742 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
NPAS1Q99742 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.21■□□□□ 0.35
NPAS1Q99742 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.21■□□□□ 0.35
NPAS1Q99742 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
NPAS1Q99742 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NPAS1Q99742 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
NPAS1Q99742 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
NPAS1Q99742 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
NPAS1Q99742 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NPAS1Q99742 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NPAS1Q99742 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NPAS1Q99742 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC17.21■□□□□ 0.35
NPAS1Q99742 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NPAS1Q99742 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms