Protein–RNA interactions for Protein: Q99727

TIMP4, Metalloproteinase inhibitor 4, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4Q99727 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
TIMP4Q99727 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TIMP4Q99727 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
TIMP4Q99727 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TIMP4Q99727 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
TIMP4Q99727 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.36■□□□□ 0.37
TIMP4Q99727 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC17.36■□□□□ 0.37
TIMP4Q99727 EGLN1P1-201ENST00000531623 762 ntBASIC17.36■□□□□ 0.37
TIMP4Q99727 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC17.36■□□□□ 0.37
TIMP4Q99727 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TIMP4Q99727 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TIMP4Q99727 ANKRD18DP-204ENST00000455355 1975 ntBASIC17.36■□□□□ 0.37
TIMP4Q99727 AC006333.2-201ENST00000607957 2099 ntBASIC17.36■□□□□ 0.37
TIMP4Q99727 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
TIMP4Q99727 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.36■□□□□ 0.37
TIMP4Q99727 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
TIMP4Q99727 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.36■□□□□ 0.37
TIMP4Q99727 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TIMP4Q99727 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
TIMP4Q99727 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.36■□□□□ 0.37
TIMP4Q99727 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TIMP4Q99727 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
TIMP4Q99727 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC17.36■□□□□ 0.37
TIMP4Q99727 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TIMP4Q99727 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.36■□□□□ 0.37
TIMP4Q99727 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TIMP4Q99727 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
TIMP4Q99727 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TIMP4Q99727 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TIMP4Q99727 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TIMP4Q99727 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TIMP4Q99727 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
TIMP4Q99727 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TIMP4Q99727 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TIMP4Q99727 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TIMP4Q99727 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TIMP4Q99727 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
TIMP4Q99727 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TIMP4Q99727 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TIMP4Q99727 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TIMP4Q99727 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TIMP4Q99727 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TIMP4Q99727 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
TIMP4Q99727 TSPY14P-201ENST00000303979 915 ntBASIC17.35■□□□□ 0.37
TIMP4Q99727 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TIMP4Q99727 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC17.35■□□□□ 0.37
TIMP4Q99727 MIR1224-201ENST00000408193 85 ntBASIC17.35■□□□□ 0.37
TIMP4Q99727 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC17.35■□□□□ 0.37
TIMP4Q99727 TMA16-209ENST00000513272 803 ntTSL 2 BASIC17.35■□□□□ 0.37
TIMP4Q99727 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC17.35■□□□□ 0.37
TIMP4Q99727 TK2-213ENST00000563369 882 ntTSL 5 BASIC17.35■□□□□ 0.37
TIMP4Q99727 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
TIMP4Q99727 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC17.35■□□□□ 0.37
TIMP4Q99727 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TIMP4Q99727 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TIMP4Q99727 AC096733.2-201ENST00000609937 1394 ntBASIC17.35■□□□□ 0.37
TIMP4Q99727 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TIMP4Q99727 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TIMP4Q99727 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC17.35■□□□□ 0.37
TIMP4Q99727 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
TIMP4Q99727 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
TIMP4Q99727 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TIMP4Q99727 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TIMP4Q99727 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TIMP4Q99727 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.35■□□□□ 0.37
TIMP4Q99727 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC17.35■□□□□ 0.37
TIMP4Q99727 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.35■□□□□ 0.37
TIMP4Q99727 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
TIMP4Q99727 AC007613.1-201ENST00000572811 2597 ntBASIC17.35■□□□□ 0.37
TIMP4Q99727 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TIMP4Q99727 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TIMP4Q99727 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC17.34■□□□□ 0.37
TIMP4Q99727 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
TIMP4Q99727 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TIMP4Q99727 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC17.34■□□□□ 0.37
TIMP4Q99727 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
TIMP4Q99727 MFAP1P1-201ENST00000442257 1255 ntBASIC17.34■□□□□ 0.37
TIMP4Q99727 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TIMP4Q99727 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TIMP4Q99727 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
TIMP4Q99727 P4HB-223ENST00000576390 439 ntTSL 4 BASIC17.34■□□□□ 0.37
TIMP4Q99727 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC17.34■□□□□ 0.37
TIMP4Q99727 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
TIMP4Q99727 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
TIMP4Q99727 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
TIMP4Q99727 AC104581.1-202ENST00000635932 2618 ntBASIC17.34■□□□□ 0.37
TIMP4Q99727 AC009113.1-201ENST00000570267 2443 ntBASIC17.33■□□□□ 0.37
TIMP4Q99727 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.33■□□□□ 0.37
TIMP4Q99727 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.33■□□□□ 0.37
TIMP4Q99727 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TIMP4Q99727 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
TIMP4Q99727 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TIMP4Q99727 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
TIMP4Q99727 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.33■□□□□ 0.37
TIMP4Q99727 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TIMP4Q99727 TEX21P-204ENST00000641479 1693 ntBASIC17.33■□□□□ 0.37
TIMP4Q99727 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TIMP4Q99727 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TIMP4Q99727 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
TIMP4Q99727 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms