Protein–RNA interactions for Protein: Q99624

SLC38A3, Sodium-coupled neutral amino acid transporter 3, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A3Q99624 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.34■□□□□ 0.53
SLC38A3Q99624 MIR4674-201ENST00000582457 87 ntBASIC18.34■□□□□ 0.53
SLC38A3Q99624 AC008622.2-201ENST00000617006 1229 ntBASIC18.34■□□□□ 0.53
SLC38A3Q99624 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SLC38A3Q99624 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC38A3Q99624 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SLC38A3Q99624 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
SLC38A3Q99624 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.34■□□□□ 0.53
SLC38A3Q99624 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC38A3Q99624 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC38A3Q99624 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC38A3Q99624 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
SLC38A3Q99624 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.34■□□□□ 0.53
SLC38A3Q99624 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SLC38A3Q99624 AC125437.2-201ENST00000625180 2167 ntBASIC18.34■□□□□ 0.53
SLC38A3Q99624 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
SLC38A3Q99624 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.34■□□□□ 0.53
SLC38A3Q99624 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.34■□□□□ 0.53
SLC38A3Q99624 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC18.34■□□□□ 0.53
SLC38A3Q99624 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC38A3Q99624 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
SLC38A3Q99624 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.34■□□□□ 0.53
SLC38A3Q99624 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SLC38A3Q99624 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.33■□□□□ 0.53
SLC38A3Q99624 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.33■□□□□ 0.53
SLC38A3Q99624 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SLC38A3Q99624 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
SLC38A3Q99624 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SLC38A3Q99624 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SLC38A3Q99624 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.33■□□□□ 0.53
SLC38A3Q99624 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.33■□□□□ 0.53
SLC38A3Q99624 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SLC38A3Q99624 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
SLC38A3Q99624 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
SLC38A3Q99624 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
SLC38A3Q99624 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
SLC38A3Q99624 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SLC38A3Q99624 AL359075.1-203ENST00000462729 1002 ntBASIC18.33■□□□□ 0.52
SLC38A3Q99624 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
SLC38A3Q99624 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
SLC38A3Q99624 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC18.33■□□□□ 0.52
SLC38A3Q99624 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC18.33■□□□□ 0.52
SLC38A3Q99624 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
SLC38A3Q99624 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
SLC38A3Q99624 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
SLC38A3Q99624 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SLC38A3Q99624 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.33■□□□□ 0.52
SLC38A3Q99624 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SLC38A3Q99624 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.33■□□□□ 0.52
SLC38A3Q99624 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.33■□□□□ 0.52
SLC38A3Q99624 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
SLC38A3Q99624 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC38A3Q99624 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
SLC38A3Q99624 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC38A3Q99624 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC38A3Q99624 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SLC38A3Q99624 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC18.32■□□□□ 0.52
SLC38A3Q99624 GAD2-202ENST00000376248 680 ntTSL 5 BASIC18.32■□□□□ 0.52
SLC38A3Q99624 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC18.32■□□□□ 0.52
SLC38A3Q99624 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SLC38A3Q99624 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC38A3Q99624 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC18.32■□□□□ 0.52
SLC38A3Q99624 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC18.32■□□□□ 0.52
SLC38A3Q99624 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SLC38A3Q99624 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.32■□□□□ 0.52
SLC38A3Q99624 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC38A3Q99624 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC18.32■□□□□ 0.52
SLC38A3Q99624 CR769767.2-201ENST00000622735 460 ntBASIC18.32■□□□□ 0.52
SLC38A3Q99624 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.32■□□□□ 0.52
SLC38A3Q99624 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.32■□□□□ 0.52
SLC38A3Q99624 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC38A3Q99624 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC38A3Q99624 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SLC38A3Q99624 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SLC38A3Q99624 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC38A3Q99624 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SLC38A3Q99624 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC38A3Q99624 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.31■□□□□ 0.52
SLC38A3Q99624 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
SLC38A3Q99624 AC138932.1-201ENST00000534164 6830 ntBASIC18.31■□□□□ 0.52
SLC38A3Q99624 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC38A3Q99624 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.31■□□□□ 0.52
SLC38A3Q99624 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SLC38A3Q99624 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC18.31■□□□□ 0.52
SLC38A3Q99624 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SLC38A3Q99624 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.31■□□□□ 0.52
SLC38A3Q99624 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC38A3Q99624 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC38A3Q99624 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC18.31■□□□□ 0.52
SLC38A3Q99624 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC38A3Q99624 AL031133.1-201ENST00000406807 723 ntBASIC18.31■□□□□ 0.52
SLC38A3Q99624 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC18.31■□□□□ 0.52
SLC38A3Q99624 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
SLC38A3Q99624 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC38A3Q99624 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.31■□□□□ 0.52
SLC38A3Q99624 CLN6-204ENST00000564752 900 ntTSL 3 BASIC18.31■□□□□ 0.52
SLC38A3Q99624 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC18.31■□□□□ 0.52
SLC38A3Q99624 MYC-208ENST00000641036 567 ntBASIC18.31■□□□□ 0.52
SLC38A3Q99624 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SLC38A3Q99624 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms