Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC19.7■□□□□ 0.74
CDCA3Q99618 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC19.7■□□□□ 0.74
CDCA3Q99618 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC19.7■□□□□ 0.74
CDCA3Q99618 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
CDCA3Q99618 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC19.7■□□□□ 0.74
CDCA3Q99618 GPR32P1-201ENST00000601788 811 ntBASIC19.7■□□□□ 0.74
CDCA3Q99618 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CDCA3Q99618 AC117500.6-201ENST00000624871 588 ntBASIC19.7■□□□□ 0.74
CDCA3Q99618 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDCA3Q99618 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.7■□□□□ 0.74
CDCA3Q99618 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDCA3Q99618 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDCA3Q99618 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDCA3Q99618 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CDCA3Q99618 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CDCA3Q99618 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CDCA3Q99618 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CDCA3Q99618 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC19.7■□□□□ 0.74
CDCA3Q99618 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDCA3Q99618 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDCA3Q99618 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
CDCA3Q99618 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.69■□□□□ 0.74
CDCA3Q99618 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
CDCA3Q99618 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDCA3Q99618 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC19.69■□□□□ 0.74
CDCA3Q99618 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CDCA3Q99618 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDCA3Q99618 TEX30-205ENST00000376029 959 ntTSL 2 BASIC19.69■□□□□ 0.74
CDCA3Q99618 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDCA3Q99618 MRPL3P1-201ENST00000400109 1033 ntBASIC19.69■□□□□ 0.74
CDCA3Q99618 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC19.69■□□□□ 0.74
CDCA3Q99618 VENTXP7-201ENST00000475503 772 ntBASIC19.69■□□□□ 0.74
CDCA3Q99618 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC19.69■□□□□ 0.74
CDCA3Q99618 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
CDCA3Q99618 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC19.69■□□□□ 0.74
CDCA3Q99618 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC19.69■□□□□ 0.74
CDCA3Q99618 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDCA3Q99618 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.69■□□□□ 0.74
CDCA3Q99618 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
CDCA3Q99618 LINC00167-201ENST00000530583 1419 ntBASIC19.68■□□□□ 0.74
CDCA3Q99618 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC19.68■□□□□ 0.74
CDCA3Q99618 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDCA3Q99618 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
CDCA3Q99618 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDCA3Q99618 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDCA3Q99618 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CDCA3Q99618 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDCA3Q99618 RCC2P3-201ENST00000418112 1537 ntBASIC19.68■□□□□ 0.74
CDCA3Q99618 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.68■□□□□ 0.74
CDCA3Q99618 ENSA-205ENST00000361532 792 ntTSL 2 BASIC19.68■□□□□ 0.74
CDCA3Q99618 IGHV3-47-201ENST00000425060 335 ntBASIC19.68■□□□□ 0.74
CDCA3Q99618 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC19.68■□□□□ 0.74
CDCA3Q99618 GUSBP12-201ENST00000513727 720 ntBASIC19.68■□□□□ 0.74
CDCA3Q99618 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CDCA3Q99618 FICD-205ENST00000552758 603 ntTSL 2 BASIC19.68■□□□□ 0.74
CDCA3Q99618 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CDCA3Q99618 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
CDCA3Q99618 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC19.68■□□□□ 0.74
CDCA3Q99618 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC19.68■□□□□ 0.74
CDCA3Q99618 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDCA3Q99618 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.68■□□□□ 0.74
CDCA3Q99618 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC19.68■□□□□ 0.74
CDCA3Q99618 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.68■□□□□ 0.74
CDCA3Q99618 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
CDCA3Q99618 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDCA3Q99618 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDCA3Q99618 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC19.68■□□□□ 0.74
CDCA3Q99618 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CDCA3Q99618 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDCA3Q99618 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDCA3Q99618 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDCA3Q99618 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.67■□□□□ 0.74
CDCA3Q99618 GABARAPL3-202ENST00000624044 1851 ntBASIC19.67■□□□□ 0.74
CDCA3Q99618 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC19.67■□□□□ 0.74
CDCA3Q99618 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDCA3Q99618 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC19.67■□□□□ 0.74
CDCA3Q99618 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDCA3Q99618 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDCA3Q99618 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDCA3Q99618 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDCA3Q99618 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC19.67■□□□□ 0.74
CDCA3Q99618 SAPCD2P3-201ENST00000455031 850 ntBASIC19.67■□□□□ 0.74
CDCA3Q99618 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC19.67■□□□□ 0.74
CDCA3Q99618 HLA-A-201ENST00000376802 1334 ntBASIC19.67■□□□□ 0.74
CDCA3Q99618 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDCA3Q99618 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDCA3Q99618 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.67■□□□□ 0.74
CDCA3Q99618 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDCA3Q99618 KATNBL1P6-202ENST00000562413 1466 ntBASIC19.67■□□□□ 0.74
CDCA3Q99618 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CDCA3Q99618 AL512353.2-201ENST00000448759 1962 ntBASIC19.66■□□□□ 0.74
CDCA3Q99618 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDCA3Q99618 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
CDCA3Q99618 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CDCA3Q99618 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.66■□□□□ 0.74
CDCA3Q99618 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CDCA3Q99618 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CDCA3Q99618 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDCA3Q99618 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDCA3Q99618 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms