Protein–RNA interactions for Protein: Q96JH7

VCPIP1, Deubiquitinating protein VCIP135, humanhuman

Predictions only

Length 1,222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPIP1Q96JH7 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
VCPIP1Q96JH7 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
VCPIP1Q96JH7 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
VCPIP1Q96JH7 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
VCPIP1Q96JH7 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
VCPIP1Q96JH7 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
VCPIP1Q96JH7 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
VCPIP1Q96JH7 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19.95■□□□□ 0.78
VCPIP1Q96JH7 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.94■□□□□ 0.78
VCPIP1Q96JH7 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.94■□□□□ 0.78
VCPIP1Q96JH7 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
VCPIP1Q96JH7 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.94■□□□□ 0.78
VCPIP1Q96JH7 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
VCPIP1Q96JH7 WIZP1-201ENST00000531444 2299 ntBASIC19.94■□□□□ 0.78
VCPIP1Q96JH7 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.94■□□□□ 0.78
VCPIP1Q96JH7 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
VCPIP1Q96JH7 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
VCPIP1Q96JH7 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC19.94■□□□□ 0.78
VCPIP1Q96JH7 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.94■□□□□ 0.78
VCPIP1Q96JH7 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.94■□□□□ 0.78
VCPIP1Q96JH7 AP001412.1-201ENST00000608405 714 ntBASIC19.94■□□□□ 0.78
VCPIP1Q96JH7 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
VCPIP1Q96JH7 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
VCPIP1Q96JH7 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
VCPIP1Q96JH7 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
VCPIP1Q96JH7 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.94■□□□□ 0.78
VCPIP1Q96JH7 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
VCPIP1Q96JH7 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC19.94■□□□□ 0.78
VCPIP1Q96JH7 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
VCPIP1Q96JH7 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
VCPIP1Q96JH7 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
VCPIP1Q96JH7 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC19.94■□□□□ 0.78
VCPIP1Q96JH7 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
VCPIP1Q96JH7 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
VCPIP1Q96JH7 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.93■□□□□ 0.78
VCPIP1Q96JH7 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC19.93■□□□□ 0.78
VCPIP1Q96JH7 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC19.93■□□□□ 0.78
VCPIP1Q96JH7 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
VCPIP1Q96JH7 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
VCPIP1Q96JH7 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.93■□□□□ 0.78
VCPIP1Q96JH7 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.93■□□□□ 0.78
VCPIP1Q96JH7 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.93■□□□□ 0.78
VCPIP1Q96JH7 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
VCPIP1Q96JH7 RPS2P55-201ENST00000397318 883 ntBASIC19.93■□□□□ 0.78
VCPIP1Q96JH7 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
VCPIP1Q96JH7 FAM197Y1-201ENST00000421178 764 ntBASIC19.93■□□□□ 0.78
VCPIP1Q96JH7 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC19.93■□□□□ 0.78
VCPIP1Q96JH7 AC012618.2-201ENST00000428058 849 ntBASIC19.93■□□□□ 0.78
VCPIP1Q96JH7 AC107956.1-201ENST00000494359 873 ntBASIC19.93■□□□□ 0.78
VCPIP1Q96JH7 AC116562.2-201ENST00000507042 360 ntBASIC19.93■□□□□ 0.78
VCPIP1Q96JH7 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC19.93■□□□□ 0.78
VCPIP1Q96JH7 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC19.93■□□□□ 0.78
VCPIP1Q96JH7 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC19.93■□□□□ 0.78
VCPIP1Q96JH7 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
VCPIP1Q96JH7 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
VCPIP1Q96JH7 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
VCPIP1Q96JH7 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
VCPIP1Q96JH7 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
VCPIP1Q96JH7 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
VCPIP1Q96JH7 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
VCPIP1Q96JH7 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.93■□□□□ 0.78
VCPIP1Q96JH7 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
VCPIP1Q96JH7 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.93■□□□□ 0.78
VCPIP1Q96JH7 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC19.93■□□□□ 0.78
VCPIP1Q96JH7 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
VCPIP1Q96JH7 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.92■□□□□ 0.78
VCPIP1Q96JH7 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
VCPIP1Q96JH7 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
VCPIP1Q96JH7 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.92■□□□□ 0.78
VCPIP1Q96JH7 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC19.92■□□□□ 0.78
VCPIP1Q96JH7 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
VCPIP1Q96JH7 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
VCPIP1Q96JH7 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
VCPIP1Q96JH7 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
VCPIP1Q96JH7 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
VCPIP1Q96JH7 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC19.92■□□□□ 0.78
VCPIP1Q96JH7 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
VCPIP1Q96JH7 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
VCPIP1Q96JH7 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.92■□□□□ 0.78
VCPIP1Q96JH7 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC19.92■□□□□ 0.78
VCPIP1Q96JH7 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC19.92■□□□□ 0.78
VCPIP1Q96JH7 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
VCPIP1Q96JH7 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC19.92■□□□□ 0.78
VCPIP1Q96JH7 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.92■□□□□ 0.78
VCPIP1Q96JH7 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC19.92■□□□□ 0.78
VCPIP1Q96JH7 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
VCPIP1Q96JH7 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC19.92■□□□□ 0.78
VCPIP1Q96JH7 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
VCPIP1Q96JH7 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC19.92■□□□□ 0.78
VCPIP1Q96JH7 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19.92■□□□□ 0.78
VCPIP1Q96JH7 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
VCPIP1Q96JH7 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
VCPIP1Q96JH7 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
VCPIP1Q96JH7 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.91■□□□□ 0.78
VCPIP1Q96JH7 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.91■□□□□ 0.78
VCPIP1Q96JH7 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
VCPIP1Q96JH7 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
VCPIP1Q96JH7 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC19.91■□□□□ 0.78
VCPIP1Q96JH7 NFYC-AS1-201ENST00000606277 1687 ntBASIC19.91■□□□□ 0.78
VCPIP1Q96JH7 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms