Protein–RNA interactions for Protein: Q96GM5

SMARCD1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, humanhuman

Predictions only

Length 515 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1Q96GM5 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMARCD1Q96GM5 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMARCD1Q96GM5 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMARCD1Q96GM5 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMARCD1Q96GM5 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMARCD1Q96GM5 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SMARCD1Q96GM5 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
SMARCD1Q96GM5 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMARCD1Q96GM5 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC19.9■□□□□ 0.78
SMARCD1Q96GM5 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC19.9■□□□□ 0.78
SMARCD1Q96GM5 WWOX-216ENST00000569818 525 ntBASIC19.9■□□□□ 0.78
SMARCD1Q96GM5 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMARCD1Q96GM5 AC006011.2-201ENST00000621313 1158 ntBASIC19.9■□□□□ 0.78
SMARCD1Q96GM5 CR769767.2-201ENST00000622735 460 ntBASIC19.9■□□□□ 0.78
SMARCD1Q96GM5 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
SMARCD1Q96GM5 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
SMARCD1Q96GM5 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SMARCD1Q96GM5 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
SMARCD1Q96GM5 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMARCD1Q96GM5 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMARCD1Q96GM5 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMARCD1Q96GM5 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
SMARCD1Q96GM5 RCC2P3-201ENST00000418112 1537 ntBASIC19.9■□□□□ 0.78
SMARCD1Q96GM5 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.9■□□□□ 0.78
SMARCD1Q96GM5 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMARCD1Q96GM5 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SMARCD1Q96GM5 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.9■□□□□ 0.78
SMARCD1Q96GM5 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMARCD1Q96GM5 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.9■□□□□ 0.78
SMARCD1Q96GM5 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMARCD1Q96GM5 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
SMARCD1Q96GM5 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SMARCD1Q96GM5 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SMARCD1Q96GM5 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SMARCD1Q96GM5 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC19.89■□□□□ 0.77
SMARCD1Q96GM5 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC19.89■□□□□ 0.77
SMARCD1Q96GM5 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SMARCD1Q96GM5 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC19.89■□□□□ 0.77
SMARCD1Q96GM5 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
SMARCD1Q96GM5 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC19.89■□□□□ 0.77
SMARCD1Q96GM5 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
SMARCD1Q96GM5 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC19.89■□□□□ 0.77
SMARCD1Q96GM5 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC19.89■□□□□ 0.77
SMARCD1Q96GM5 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SMARCD1Q96GM5 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC19.89■□□□□ 0.77
SMARCD1Q96GM5 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SMARCD1Q96GM5 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC19.89■□□□□ 0.77
SMARCD1Q96GM5 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SMARCD1Q96GM5 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SMARCD1Q96GM5 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC19.89■□□□□ 0.77
SMARCD1Q96GM5 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SMARCD1Q96GM5 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SMARCD1Q96GM5 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SMARCD1Q96GM5 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.88■□□□□ 0.77
SMARCD1Q96GM5 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
SMARCD1Q96GM5 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.88■□□□□ 0.77
SMARCD1Q96GM5 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC19.88■□□□□ 0.77
SMARCD1Q96GM5 AC036111.1-201ENST00000533973 1582 ntBASIC19.88■□□□□ 0.77
SMARCD1Q96GM5 KRT8P32-201ENST00000512863 1461 ntBASIC19.88■□□□□ 0.77
SMARCD1Q96GM5 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
SMARCD1Q96GM5 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
SMARCD1Q96GM5 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC19.88■□□□□ 0.77
SMARCD1Q96GM5 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC19.88■□□□□ 0.77
SMARCD1Q96GM5 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SMARCD1Q96GM5 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.88■□□□□ 0.77
SMARCD1Q96GM5 CD70-202ENST00000423145 881 ntTSL 2 BASIC19.88■□□□□ 0.77
SMARCD1Q96GM5 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC19.88■□□□□ 0.77
SMARCD1Q96GM5 AC009947.2-201ENST00000444014 672 ntBASIC19.88■□□□□ 0.77
SMARCD1Q96GM5 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
SMARCD1Q96GM5 COX11P1-201ENST00000489116 835 ntBASIC19.88■□□□□ 0.77
SMARCD1Q96GM5 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC19.88■□□□□ 0.77
SMARCD1Q96GM5 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC19.88■□□□□ 0.77
SMARCD1Q96GM5 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC19.88■□□□□ 0.77
SMARCD1Q96GM5 MIR3180-5-201ENST00000583743 153 ntBASIC19.88■□□□□ 0.77
SMARCD1Q96GM5 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SMARCD1Q96GM5 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC19.88■□□□□ 0.77
SMARCD1Q96GM5 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SMARCD1Q96GM5 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SMARCD1Q96GM5 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
SMARCD1Q96GM5 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SMARCD1Q96GM5 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SMARCD1Q96GM5 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.88■□□□□ 0.77
SMARCD1Q96GM5 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.88■□□□□ 0.77
SMARCD1Q96GM5 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SMARCD1Q96GM5 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SMARCD1Q96GM5 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.88■□□□□ 0.77
SMARCD1Q96GM5 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC19.88■□□□□ 0.77
SMARCD1Q96GM5 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SMARCD1Q96GM5 AL109659.2-201ENST00000606809 1674 ntBASIC19.87■□□□□ 0.77
SMARCD1Q96GM5 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
SMARCD1Q96GM5 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC19.87■□□□□ 0.77
SMARCD1Q96GM5 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SMARCD1Q96GM5 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SMARCD1Q96GM5 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC19.87■□□□□ 0.77
SMARCD1Q96GM5 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC19.87■□□□□ 0.77
SMARCD1Q96GM5 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SMARCD1Q96GM5 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
SMARCD1Q96GM5 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
SMARCD1Q96GM5 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SMARCD1Q96GM5 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms