Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SH3KBP1Q96B97 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SH3KBP1Q96B97 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC18.74■□□□□ 0.59
SH3KBP1Q96B97 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
SH3KBP1Q96B97 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SH3KBP1Q96B97 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
SH3KBP1Q96B97 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SH3KBP1Q96B97 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.73■□□□□ 0.59
SH3KBP1Q96B97 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SH3KBP1Q96B97 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SH3KBP1Q96B97 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SH3KBP1Q96B97 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.73■□□□□ 0.59
SH3KBP1Q96B97 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
SH3KBP1Q96B97 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SH3KBP1Q96B97 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.73■□□□□ 0.59
SH3KBP1Q96B97 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SH3KBP1Q96B97 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SH3KBP1Q96B97 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
SH3KBP1Q96B97 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SH3KBP1Q96B97 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SH3KBP1Q96B97 AC113347.1-201ENST00000413321 391 ntBASIC18.73■□□□□ 0.59
SH3KBP1Q96B97 AL137013.1-201ENST00000432946 1228 ntBASIC18.73■□□□□ 0.59
SH3KBP1Q96B97 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.73■□□□□ 0.59
SH3KBP1Q96B97 AC008040.2-201ENST00000461049 708 ntBASIC18.73■□□□□ 0.59
SH3KBP1Q96B97 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC18.73■□□□□ 0.59
SH3KBP1Q96B97 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
SH3KBP1Q96B97 DUT-205ENST00000558813 769 ntTSL 2 BASIC18.73■□□□□ 0.59
SH3KBP1Q96B97 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
SH3KBP1Q96B97 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SH3KBP1Q96B97 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SH3KBP1Q96B97 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SH3KBP1Q96B97 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SH3KBP1Q96B97 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.73■□□□□ 0.59
SH3KBP1Q96B97 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SH3KBP1Q96B97 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.72■□□□□ 0.59
SH3KBP1Q96B97 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SH3KBP1Q96B97 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
SH3KBP1Q96B97 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SH3KBP1Q96B97 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.72■□□□□ 0.59
SH3KBP1Q96B97 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC18.72■□□□□ 0.59
SH3KBP1Q96B97 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.72■□□□□ 0.59
SH3KBP1Q96B97 TMPOP1-202ENST00000424642 1267 ntBASIC18.72■□□□□ 0.59
SH3KBP1Q96B97 CCR12P-201ENST00000446203 998 ntBASIC18.72■□□□□ 0.59
SH3KBP1Q96B97 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SH3KBP1Q96B97 P4HB-223ENST00000576390 439 ntTSL 4 BASIC18.72■□□□□ 0.59
SH3KBP1Q96B97 AC116562.4-202ENST00000641738 218 ntBASIC18.72■□□□□ 0.59
SH3KBP1Q96B97 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
SH3KBP1Q96B97 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SH3KBP1Q96B97 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SH3KBP1Q96B97 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SH3KBP1Q96B97 LINC01465-201ENST00000408887 1940 ntBASIC18.72■□□□□ 0.59
SH3KBP1Q96B97 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SH3KBP1Q96B97 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SH3KBP1Q96B97 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.71■□□□□ 0.59
SH3KBP1Q96B97 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SH3KBP1Q96B97 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.71■□□□□ 0.59
SH3KBP1Q96B97 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
SH3KBP1Q96B97 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.71■□□□□ 0.59
SH3KBP1Q96B97 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SH3KBP1Q96B97 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SH3KBP1Q96B97 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC18.71■□□□□ 0.59
SH3KBP1Q96B97 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
SH3KBP1Q96B97 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
SH3KBP1Q96B97 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.71■□□□□ 0.59
SH3KBP1Q96B97 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
SH3KBP1Q96B97 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SH3KBP1Q96B97 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.71■□□□□ 0.59
SH3KBP1Q96B97 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SH3KBP1Q96B97 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SH3KBP1Q96B97 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SH3KBP1Q96B97 LIN28AP1-201ENST00000429574 405 ntBASIC18.71■□□□□ 0.59
SH3KBP1Q96B97 SLC25A1P2-201ENST00000430693 912 ntBASIC18.71■□□□□ 0.59
SH3KBP1Q96B97 SLC25A3P1-201ENST00000443844 931 ntBASIC18.71■□□□□ 0.59
SH3KBP1Q96B97 FDX2-206ENST00000492239 773 ntTSL 2 BASIC18.71■□□□□ 0.59
SH3KBP1Q96B97 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC18.71■□□□□ 0.59
SH3KBP1Q96B97 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC18.71■□□□□ 0.59
SH3KBP1Q96B97 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.71■□□□□ 0.59
SH3KBP1Q96B97 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SH3KBP1Q96B97 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.71■□□□□ 0.59
SH3KBP1Q96B97 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SH3KBP1Q96B97 HTR7P1-202ENST00000624664 4411 ntBASIC18.71■□□□□ 0.59
SH3KBP1Q96B97 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
SH3KBP1Q96B97 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SH3KBP1Q96B97 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SH3KBP1Q96B97 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
SH3KBP1Q96B97 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SH3KBP1Q96B97 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SH3KBP1Q96B97 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SH3KBP1Q96B97 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
SH3KBP1Q96B97 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
SH3KBP1Q96B97 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
SH3KBP1Q96B97 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.71■□□□□ 0.58
SH3KBP1Q96B97 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SH3KBP1Q96B97 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SH3KBP1Q96B97 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
SH3KBP1Q96B97 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.7■□□□□ 0.58
SH3KBP1Q96B97 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
SH3KBP1Q96B97 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC18.7■□□□□ 0.58
SH3KBP1Q96B97 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SH3KBP1Q96B97 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms